KEGG   Cervus canadensis (wapiti): 122439871
Entry
122439871         CDS       T07554                                 
Symbol
KDM3B
Name
(RefSeq) lysine-specific demethylase 3B isoform X1
  KO
K15601  [histone H3]-dimethyl-L-lysine9 demethylase [EC:1.14.11.65]
Organism
ccad  Cervus canadensis (wapiti)
Pathway
ccad04714  Thermogenesis
Brite
KEGG Orthology (KO) [BR:ccad00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04714 Thermogenesis
    122439871 (KDM3B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ccad03036]
    122439871 (KDM3B)
Enzymes [BR:ccad01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.65  [histone H3]-dimethyl-L-lysine9 demethylase
     122439871 (KDM3B)
Chromosome and associated proteins [BR:ccad03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    122439871 (KDM3B)
SSDB
Motif
Pfam: PWWP_KDM3B Tudor_KDM3B JmjC DUF7030 Cupin_2 C1_2
Other DBs
NCBI-GeneID: 122439871
NCBI-ProteinID: XP_043321328
LinkDB
Position
4:complement(58898301..58954598)
AA seq 1759 aa
MADAAASPVGKRLLLLFADTAGSSSASVPAAAAAAAGGDPGPALRTRAWRAGTVRAMSGA
VPQDLAIFVEFDGCNWKQHSWVKVHAEEVIVLLLEGSLVWAPRKDPVLIQGTRVSIAQWP
ALTFTPLVDKLGLGSVVPVEYLLDRELRFLSDANGLHLFQMGTDSQNQILLEHAALRDTV
NALISDQKLQEIFSRGPYSVQGHRVKVYQPEGEESWLCGVVSHQDSITRLMEVSVTESGE
IKSVDPRLIHVMLVDNSAPQSEGGTLKAVKSSKGKKKRESIEGKDGRRRKSASDSGCDPA
SKKLKGDRGEVDSNGSDGGEASRGPWKGGNASGEPGLDQRTKQPPTTFVPQINRNIRFAT
YTKENGRTLVVQDEPVGGDTPLPFTPYSTATGQTPLAPEVGGAENKEAGKTLDQVGQCMV
ASAAVVTTASSTPTTVRISDTGLATGTGPEKQKGSWSQAPGENSRNSILASSGFGASLPG
SSQALTFGSGRSQSNGVLATENKPLGFSFGCSPAPESQKDSDISKNLFFQCMSQTLPTSN
YFTTVSENLADDSSSRDSFKQSLESLCKGRSTLGADTKSGSKAGSSVDRKVPAESMPTLT
PAFPRSLLNARTPDSHENLFLQPPKLSREEPSNPFLAFVEKVEHSPFSSFASQASGGSSS
ATTVTSKAAPSWPESHSSTDSASLAKKKTLFITTDSSKLVSGVLGSALTTGGPSLSAMGN
GRSSSPTSSLTQPIEMPTLSSSPTEERPTVGPGQQDNPLLKTFSNVFGRHSGSFLSSPAD
FSQENKAPFEAVKRFSLDERSLACRQDSDSSTNSDLSDLSDSEEQLQAKTGLKGIPEHLM
GKLGPNGERSAELLLGKGKGKQAPKGRPRTAPLKVGQSVLKDVSKVKKLKQSGEPFLQDG
SCINVAPHLHKCRECRLERYRKFKEQEQDDSTVACRFFHFRRLIFTRKGVLRVEGFLSPQ
QSDPDAMNLWIPSSSLAEGIDLETSKYILANVGDQFCQLVMSEKEAMMMVEPHQKVAWKR
AVRGVREMCDVCETTLFNIHWVCRKCGFGVCLDCYRLRKSRPRSETEEMGDEEVFSWLKC
AKGQSHEPENLMPTQIIPGTALYNIGDMVHAARGKWGIKANCPCISRQNKSVLRPAVTNG
MSQLPSINPSASSGNETTFSGGGGTAPGTQPETDHVPKADSTDSRSDEPLKADSSTSNSN
SELKAIRPPCPDTAPPSSALHWLADLATQKAKEETKEAGSLRSVLNKESHSPFGLDSFNS
TAKVSPLTPKLFNSLLLGPTASNNKTEGSSLRDLLHSGPGKLPQTPLDTGIPFPPVFSTS
SAGMKNKASLPNFLDHIIASVVENKKTSDAAKRACNLTDTQKEVKEMVMGLNVLDPHTSH
SWLCDGRLLCLHDPSNKNNWKIFRECWKQGQPVLVSGVHKKLKSELWKPEAFSQEFGDQD
VDLVNCRNCAIISDVKVRDFWDGFEIICKRLRSEDGQPMVLKLKDWPPGEDFRDMMPTRF
EDLMENLPLPEYTKRDGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGTTNLHLD
VSDAVNVMVYVGIPIGEGAHDEEVLKTIDEGDADEVTKQRIHDGKEKPGALWHIYAAKDA
EKIRELLRKVGEEQGQENPPDHDPIHDQSWYLDQTLRKRLYEEYGVQGWAIVQFLGDAVF
IPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFRLTQEFRHLSNTHTNHEDKLQVKNIIYH
AVKDAVGTLKAHESKLARS
NT seq 5280 nt   +upstreamnt  +downstreamnt
atggcggacgcggcggcctccccggtgggcaagcggctgctgcttctgttcgcggacact
gcgggctcgtcctcggcctcggtccccgcggcggcggcggcggcggcgggcggagatccg
gggcctgcgctgcgcactcgggcctggcgggccggcacggtgcgggccatgagcggggcg
gtgccccaggacctagcgatctttgtagagtttgatggctgtaactggaagcagcactcc
tgggttaaagttcacgctgaagaagttattgtacttttgctggaagggtctctagtatgg
gcacctcggaaggacccagtccttatccagggcactcgagtctcaattgcacagtggcca
gccctgactttcactcccctggtagataaactcggtttgggttctgtggttccagttgaa
taccttctggatcgggagcttcgtttcctgtcagatgctaatgggttgcatttgttccag
atgggaacagatagccaaaaccagattcttttggaacatgctgctctgagagacacagtt
aatgctttgatcagtgaccaaaagctacaagagatattcagccgaggtccctacagtgtt
caaggtcacagggtcaaagtataccagccagagggagaagaaagttggctctgtggtgtt
gtaagccatcaagactccatcacccgtcttatggaggtgtctgtaactgagagtggtgag
atcaagtccgtagatcccagattgatccatgtgatgctcgtggataattcagcgcctcag
agcgaggggggtacgttaaaagcagtaaaatcttccaaaggaaagaagaaaagagagagc
atagaggggaaagatggccggaggaggaaaagtgcttcggactctgggtgtgaccctgca
tcaaagaaattgaaaggagacaggggtgaagtagacagtaatgggagcgatggaggcgag
gcaagccgagggccctggaaaggagggaatgccagtggagagccagggctggatcagaga
accaagcagccaccgactacatttgtcccccagattaaccgcaacattcgctttgccact
tacaccaaagaaaacggcaggactctggtggtgcaggatgagcctgtgggtggggacaca
cctctacctttcactccgtattctacagccacaggtcagacacctttggccccagaggtg
ggtggagccgaaaataaagaggcaggaaaaacactggatcaagttggccagtgtatggtg
gcttcagcagctgtggtcactaccgccagctccaccccaaccacggtgaggatctcagac
actggccttgcaacagggactgggccggaaaaacagaaaggcagctggtcgcaggcccca
ggagagaattcaaggaattctatcctggcctcttctggatttggagcatctctcccgggt
tcatcacaagctttgacttttggaagtggaaggagccagtccaatggggttcttgccaca
gagaacaaacctttgggcttctcatttggctgtagcccagcaccagagtctcagaaagac
tctgatatctcaaaaaacttgttttttcaatgcatgtcccaaactttacccaccagtaac
tacttcactaccgtttcagagaatttggctgatgattcctccagtcgagactcatttaaa
caaagccttgagagcctctgtaaaggaagatccactctcggagcagacactaaatcaggc
tctaaggctggcagctctgtggatcggaaagtgcctgcagagtccatgcccaccctcacg
ccagccttcccacggagcctcctaaatgcccgcaccccagacagtcatgaaaatctattt
ttacagcccccgaaactgtcccgagaagagccttctaaccctttcttggcatttgtggag
aaagttgaacatagccctttcagcagctttgcatctcaggcctcaggtggctcttcctct
gctaccactgtcacctccaaggcagcacccagctggcccgagtctcactcctctactgat
tcggcatctttagcaaagaagaaaaccctcttcatcacaactgactcctccaaactggtg
tctggtgttctgggctcagctcttaccactggggggccaagcctctctgccatggggaat
ggccgctccagttcccccaccagcagcctcacccagcccattgagatgcctactctctcc
tccagccccacagaggagaggccaactgtggggcctgggcagcaggacaatcctctcctt
aaaacctttagtaacgtctttggcaggcactcaggcagctttctgtcctccccagcagat
ttttcacaggagaacaaagctccttttgaagctgtgaaaaggttctcactggatgagcga
agcttggcttgcagacaggactcagactccagtaccaatagtgacctgtcagatttaagc
gactctgaggagcagctgcaagccaagactggcctgaaggggattccggagcacctgatg
gggaagctgggccccaatggggaacgcagtgctgagctgttgctgggaaaaggcaaaggg
aagcaggcccccaagggccggcctcggactgctcccttgaaagtgggccagtcagtgctg
aaagatgtgagcaaagtaaagaagctgaagcagtccggagagcccttcctgcaggatggg
tcgtgcatcaatgtagcccctcacctgcataagtgtcgtgagtgccgcctggagcggtat
cggaagtttaaggaacaggagcaagatgattccactgtggcctgccgcttctttcacttc
cggaggttgatcttcactcgaaaaggtgtactccgagtggaagggtttctgagtccccag
caaagtgaccctgatgccatgaacctgtggattccctcttcctccctagcagaaggaata
gacctagaaacctcaaaatacattctggccaatgttggagaccagttctgccaacttgtg
atgtctgagaaggaggccatgatgatggtggagccacaccagaaagtggcatggaagcga
gcagtccgaggtgtacgggagatgtgtgatgtgtgtgaaacaaccctcttcaacatccac
tgggtttgtcgcaaatgcggatttggggtctgccttgactgttacaggctcaggaaaagc
cgaccacgcagtgagacagaagagatgggtgatgaagaggttttctcctggttgaagtgt
gcaaaggggcagtcccatgaaccagagaatctcatgcccacacagataatccctggcaca
gctctttacaatattggagacatggtacatgctgcccggggcaagtggggaattaaagca
aactgcccttgtattagtcggcagaacaaatctgtattgagacctgctgtcactaatggg
atgtcacagcttcctagcataaaccctagtgcctcttctggaaatgaaaccaccttctca
ggcggaggaggaactgcaccgggaacacaaccagagacagaccatgttcccaaagccgac
agtactgacagcagatcagatgagcctctgaaagcagacagttcgacatcaaatagcaat
agtgagctaaaagccatcaggcccccttgtcccgacacagccccaccctcctctgccctg
cactggttggcggatttagcaactcagaaggctaaagaagaaacaaaagaagcagggtcc
ctgaggtcggtgctcaataaagagtctcattcaccctttgggctggactcgttcaactcc
actgcaaaggtctctccgttgactccaaagctttttaacagtctgttactgggtcccact
gcctccaacaacaaaactgaaggctctagccttcgagacctcctccactccgggcccgga
aagcttcctcaaacccccttggacacaggcataccctttcccccggtcttctctacatcc
tcagcaggaatgaagaacaaggccagcctacccaacttccttgaccacatcattgcctca
gtggtagaaaataagaagacctcagatgctgcaaagcgggcctgtaacttgactgatacc
caaaaggaagtgaaggagatggtgatggggttaaatgtgctggacccccatacctctcat
tcctggctctgtgatggaagacttttgtgtcttcatgaccccagcaacaaaaacaattgg
aagatcttccgggagtgttggaagcaaggccagccagtgctggtttcaggggtacataaa
aagctcaagtctgagctctggaagccagaagcctttagccaggaatttggagaccaggat
gtggacttggtgaactgcaggaactgtgctataatttctgatgtgaaagttcgggatttc
tgggatggcttcgagatcatatgcaagcgattaaggtcagaagatgggcagccaatggtg
ctcaaactcaaggactggcctcctggggaagattttcgggacatgatgccaacaaggttt
gaagatctgatggagaaccttcctctgccagaatataccaagcgagatggcaggctcaat
ctggcctccaggctgcctagttattttgtaaggcccgatctgggccccaagatgtacaat
gcctacggcttgataacagcagaagacagaagagttggcacaacaaatcttcacttagat
gtgtctgatgcagttaatgtgatggtgtatgttgggatccccattggggagggtgctcat
gatgaagaggttctcaagacaattgacgagggagatgctgatgaggtgacaaagcaaagg
attcatgatggaaaggagaaacccggtgctttgtggcatatctatgcagccaaggatgca
gagaagatccgggagctgcttcgaaaggttggagaagagcaaggccaagagaatccccct
gatcatgatccaattcatgaccaaagttggtacttggaccagaccctacgtaagcggctc
tatgaggaatatggtgtgcaaggctgggccattgttcagttcctgggagatgctgtcttc
atacctgctggagccccacaccaggtgcacaatctatacagttgcataaaagtagcagaa
gactttgtatctccagaacatgtaaagcactgttttcgcctgacgcaggaattcaggcat
ctctctaacactcatacaaaccatgaggataaactgcaggtgaagaacatcatttatcat
gcagtgaaagatgctgttggcaccctcaaggctcacgaatccaagctggcaagatcgtag

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