Cervus canadensis (wapiti): 122440083
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Entry
122440083 CDS
T07554
Name
(RefSeq) synphilin-1 isoform X1
KO
K04558
synphilin-1
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad05012
Parkinson disease
ccad05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05012 Parkinson disease
122440083
05022 Pathways of neurodegeneration - multiple diseases
122440083
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Gene cluster
GFIT
Motif
Pfam:
SNCAIP_SNCA_bd
Ank_2
Ank_4
Ank
Ank_5
Ank_3
Motif
Other DBs
NCBI-GeneID:
122440083
NCBI-ProteinID:
XP_043321827
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Position
4:76159611..76313463
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AA seq
969 aa
AA seq
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MEAPEYLDLDEIDFSDDISYSVTSLKTIPELCRRCDSQNEDRSVSSSGWNCGVSTLITNT
QKPTGIADVYSKFRPVKRVSPLKHQPETLENNESDDQKNQKAEYQKGGDPDPGPQPEELG
PRAGEGSPQRKSTEPSALLGELEHYDLDMDEILDVPYIKSSQQLASFTKATSEKRILGLC
TSINGLSGKACPTGSAESSPSNMTPFCVLSPVKSPHLRKASSVVQDQQKLSPEESESSPP
LVKCGSAYEPEDQGKDFLHKTFSDPHSRKVDKAMAPDCQLRAFHLQPSATDPKPEEQVGG
MNWTSSQGPEERNEYLKKVKSILNIVKEGQISLLPHLAADNLDKIHDESGNNLLHVAASQ
GHAECLQHLTSLMGEDCLNERNVEKLTPAGLAIKNGQLECVRWMVSETEAIAELSCSKDF
PSLIHYAGCFGQEKILLWLLQFMQEQGISLDEVDQDGNSAVHVASQHGYLGCIQTLVEYG
ANVTMQNHVGEKPSQSAERHGHSLCSRYLVVVETCMSLASQVVKLTKQLKEQTMQRVTLQ
NQLQQLLEAQKSEGKSLLSSPSSPSSPACRKPQWKSPDAEDESVAKSKPGVQEGIQVLGS
LSASSRARAKVKDEDSDKILRQLLGKDISENVCTQEKLSLEFQDAQTSSRHSKKIPLEKR
ELKLARLKQLMQRSLSESDTDSNNSEDPKGTPVRKVDRPRPQPIVESVEGVDSAESLHLM
IKKHTLASGRRFPFSIKASKSLEGHSPSPTSESSEPDLESQCPGSGNTPPSHPSGEAPQP
SPDSTAAQKVATSPKSALKSPSSKRRTSQNSKLRVTFEEPVVQMEQTSLELNGEKEREKG
RALQRPSAGSESGDQLKRPFGTFRSIMETLSGNQNNNNNYQASNQLKTSTLPLTSLGRKV
TDGKGNTGSSASKGKNKAEMYGSCINLSSNTLIEEHLRNYARHDDISRKMKKSYSIKHVA
EPESKELYL
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atggaagcccctgaataccttgatttggatgaaattgacttcagtgatgacatctcttat
tcagtcacgtcactcaagaccatcccggaactgtgccgaagatgtgattcccaaaatgaa
gacagatcagtgtctagctctggctggaattgtggtgtctcaactcttattacaaacacg
cagaagcccacaggaatcgccgatgtgtatagtaagttccgcccagtgaaaagagtgtcc
cccttgaaacaccagccagagactctggagaacaatgaaagtgatgatcaaaagaaccaa
aaggcagagtaccagaaagggggtgatcctgacccaggcccccagcccgaggagctcggc
cccagagctggcgagggcagcccccagaggaagagcacggagcccagcgccctgctgggg
gagctggaacattatgacctcgacatggatgagattctcgacgtgccttacatcaaatcc
agtcagcagctggcctctttcaccaaggcgacttcggaaaaaaggattttgggtttatgc
acaagcattaacggcctttccggcaaagcctgccctacaggaagtgccgagagctccccg
tctaacatgacaccgttttgtgttctttctcctgtgaaaagccctcacttgagaaaagcg
tcctctgttgtccaggaccaacagaagctctcccctgaggaatcggagagttctcctcct
ctcgttaaatgtggctctgcttatgagcctgaagaccagggtaaggacttcctacacaag
accttcagtgatcctcacagtcggaaagttgacaaggctatggcaccagattgccagctc
agggccttccatctgcagccctcggcaacggaccccaaacctgaggagcaggttggcggc
atgaactggaccagctcccagggacccgaagaaaggaacgagtacctgaaaaaagtgaaa
agcatcttgaacattgttaaagaagggcaaatatctctcctgccacacctagctgccgac
aatctagacaaaattcatgacgaaagtggaaacaatctcttacacgttgccgcatcacag
ggacatgcagagtgtctgcagcacctcacttctttgatgggagaagactgcctcaacgag
cgaaatgtggaaaagttgactccagcaggcctggccatcaagaatggtcagttggagtgt
gtacgctggatggtcagtgaaacagaagccattgctgaattgagttgttctaaggatttt
ccaagccttattcattacgcaggttgttttggtcaggagaagattctgctgtggcttctt
cagttcatgcaagagcagggcatctcgctggatgaagtggaccaagatggtaacagtgct
gttcatgtggcctcacagcatggctacctcgggtgcatacagaccctggttgagtatgga
gcaaatgtcacgatgcagaaccacgtgggggagaagccctcccagagcgccgagcgccac
ggacacagcctgtgctcccggtacctggtggtggtggagacctgcatgtcgctagcctcc
caggtggtgaagctcaccaagcagctgaaggaacagacgatgcaacgtgtcacactgcag
aaccagctccaacaacttctagaagcccagaaatcagagggcaagtcactcctttcttca
cccagttcaccatcctccccagcttgcagaaagccccagtggaagtccccagacgcagag
gatgagtctgtagccaaaagcaaaccgggagtccaggaggggattcaggttcttggaagc
ctgtcagcatccagccgggctagggccaaagtgaaagacgaagattctgataaaatccta
cgtcagttattaggaaaagatatttcagagaatgtctgcacccaggaaaagctgtcgttg
gaattccaggatgctcagacttcctcgagacattccaaaaagatcccgctggagaagagg
gaactgaagttagcgcggctaaagcagctgatgcagcggtccctgagcgagtctgacacg
gactccaacaactctgaggaccccaagggcacccctgtgaggaaggttgacaggcccaga
ccgcagcccattgtggagagtgtggagggcgtggacagcgcagagagcctccacttgatg
atcaagaaacacaccttggcatcaggacgcaggtttccttttagtatcaaggcctccaaa
tccctggagggccacagcccatcccccacctcagagagcagcgagccggacttggaatcc
cagtgtccgggctcaggaaacacacccccaagccacccctctggagaagcccctcagccc
agccctgatagcacagccgcccagaaagtggccacgagtcccaagagtgccctcaagtcc
ccgtcgtccaagcgccggacatctcagaactcaaaactcagagtgacctttgaggagccg
gtggtgcagatggagcaaactagccttgaactaaacggagaaaaggagcgagagaagggc
agggccctccagcggccgtccgcgggtagcgaatcaggggatcagctcaaaaggcctttt
ggaaccttccgatccatcatggagacgctcagtggcaaccagaacaataacaataactat
caggcatcaaaccagctgaagacctccaccctccccttaacctcccttgggaggaaggtg
acggacggtaagggaaacaccgggagctctgctagcaaaggaaaaaataaggcggagatg
tacggcagctgcatcaatctttcctctaacacgctgattgaagagcatctgcgtaactat
gcacggcatgatgacatcagtagaaaaatgaagaaatcctacagtataaagcatgttgct
gagccagaatcaaaagaactctacttataa
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