Cervus canadensis (wapiti): 122440154
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Entry
122440154 CDS
T07554
Symbol
IRF1
Name
(RefSeq) interferon regulatory factor 1 isoform X1
KO
K09444
interferon regulatory factor 1
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04625
C-type lectin receptor signaling pathway
ccad04668
TNF signaling pathway
ccad04917
Prolactin signaling pathway
ccad05133
Pertussis
ccad05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04668 TNF signaling pathway
122440154 (IRF1)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
122440154 (IRF1)
09152 Endocrine system
04917 Prolactin signaling pathway
122440154 (IRF1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
122440154 (IRF1)
09171 Infectious disease: bacterial
05133 Pertussis
122440154 (IRF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccad03000
]
122440154 (IRF1)
Transcription factors [BR:
ccad03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
122440154 (IRF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
122440154
NCBI-ProteinID:
XP_043321951
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All DBs
Position
4:complement(85298139..85305164)
Genome browser
AA seq
321 aa
AA seq
DB search
MPITRMRMRPWLEMQINSNQIPGLIWINKEEMIFQIPWKHAAKHGWDINKDACLFRSWAI
HTGRYKAGEKEPDPKTWKANFRCAMNSLPDIEEVKDQSRNKGSSAVRVYRMLPPLTKNQR
KERKSKSSRDAKSKAKKKPYGEYSPDTFSDGLSSSTLPDDHSNYTVRSYMGQDLDIERTL
TPALSPSVSSTLSIWPIPVEAVPDSTSDLYNFQVSPMPSTSEAATDEDEEGKLTEDIMKL
LEQTGWQQTSVDGKGYLLNEPGAQPTSVYGEFSCKEEPEVDSPGGYIGLISSDMKNMDAS
WLDSLLTPVRLPSVQAIPCAP
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcactcggatgcgcatgagaccttggctagagatgcagattaattccaaccaa
atcccagggctgatctggattaataaagaggagatgatcttccagatcccatggaagcac
gctgcgaagcatggctgggatatcaacaaggatgcctgtctgtttcggagctgggccatt
cacacaggccgatacaaagcaggggaaaaggagcctgatcccaagacctggaaggccaac
tttcgctgcgccatgaactccctgccagatattgaggaggtgaaggaccagagcaggaac
aagggcagttcagctgtgcgggtgtaccggatgctcccacccctcaccaagaaccagagg
aaagagagaaagtccaagtccagccgagacgctaagagcaaggccaagaagaagccatat
ggggaatacagccccgataccttctctgatggactcagtagctccaccctgcctgatgac
catagcaactacacagttcgcagctacatggggcaggacctagacattgaacggactctc
actccagcgctgtcaccgagcgtcagtagtactctttctatctggcccattccagtggaa
gccgtgccagacagcaccagcgacctgtacaactttcaggtgtcgcccatgccctccacc
tccgaagctgcaacagatgaggacgaggaagggaaattaactgaggacatcatgaagctc
ttggagcaaacagggtggcagcagacaagcgtggatgggaaggggtacctgcttaatgaa
cccggggcccagcccacctctgtctacggagagttcagttgcaaggaggagccagaagtt
gacagccctggggggtatattggcctgatatcttcagatatgaagaacatggatgccagc
tggttggacagcctgctgaccccggtcaggctgccctccgtccaggccattccttgtgca
ccatag
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integrated database retrieval system
