Cervus canadensis (wapiti): 122440284
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Entry
122440284 CDS
T07554
Name
(RefSeq) LOW QUALITY PROTEIN: general transcription factor IIF subunit 1-like
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122440284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccad03021
]
122440284
Transcription machinery [BR:
ccad03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
122440284
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
122440284
NCBI-ProteinID:
XP_043322283
LinkDB
All DBs
Position
4:88820540..88823201
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AA seq
517 aa
AA seq
DB search
MAALGPSSQNVTEYVVRVPKNTTKKYNIMAFNAADKVNLFSTWNQARLERDLSNKKIYQE
EEMPESGAGSEFNSKLREEARRKKYGIVLKEFRPEDQPWLLRVNGKSGRRFKGIKKGGVT
ENTSYYIFTQCPDGAFEAFPVHNWYNFTPLAKHRTLTAEEAEEEWERRNKVLNHFSIMQQ
RRLKDQDQDEEDEEKEKRSRKKASELRIHDXEDDLEMSSDDSEASGEEGGRAPKAKKKAP
PSKGGRKKKKKGSDDEAFEDSDDGDFEGQEVDYMSDGSSSSQDELEGKPKVTQQEEGPKG
VDEQSESSEESEEEKPPEEDKEEEEEKKAPTPQEKKRRKDSSEESDSSEESDIDSEASSA
LFMAKKKTPPKRERKPSGGSSRGNSRPGTPSTEAGSASSTLRAAASKLEQGKRPSETPAA
KRLRLDTGPQSLSGKSTPQPQSGKSTPSSIDVQVTENAVRRYLTRKPMTTKDLRKKFQTK
KTGLSSEQTVNVLAQILKRLNPEGKMINDKMHFSLKE
NT seq
1553 nt
NT seq
+upstream
nt +downstream
nt
atggcggccctcggccccagcagccagaatgtcactgagtatgtcgtccgagttcccaaa
aataccaccaaaaaatacaatatcatggctttcaatgcagccgataaagtcaacctcttt
tctacttggaatcaggcccggctggaacgagacctgagcaacaagaagatttaccaagag
gaggagatgcctgagtcgggcgccggcagcgagttcaacagcaagctccgggaggaggcg
cggaggaagaagtatggcatcgtcctcaaggagttccggccagaggaccagccctggctg
ctgcgggtcaacggcaaatcgggccgcaggttcaagggcataaagaagggcggcgtgaca
gaaaacacctcctactacatctttacccagtgccctgatggggctttcgaggccttccct
gtgcacaactggtataacttcacgccgctggccaagcaccgcacgctcacggccgaggag
gccgaggaggagtgggagaggagaaacaaggtcctgaaccacttcagcatcatgcagcag
cggcgactgaaagaccaggaccaggacgaggaggatgaggagaaggagaagcgcagccgc
aagaaggccagcgagctgcgcatccacgacctgaggacgacctggagatgtcgtccgatg
acagcgaggccagcggcgaggagggtggcagagcccccaaggccaagaagaaggcaccgc
ccagcaaggggggccggaaaaagaagaagaagggctcagatgatgaggcctttgaggaca
gtgatgacggggacttcgagggccaggaggtggactacatgtccgacggctccagcagct
cccaggatgagctggagggcaagcccaaggtcacccagcaggaggagggtcccaagggcg
tggacgagcagagtgagagcagtgaagagagcgaggaggaaaagccgcccgaggaggaca
aggaggaggaggaggagaagaaggcgcccacgccgcaggagaagaagcggaggaaagaca
gcagcgaggagtccgacagctcggaggagagtgacattgacagcgaagcctcctcggcac
tcttcatggcgaaaaagaagacgccccccaaaagggagcggaagccatcagggggcagtt
cccggggtaacagccgaccaggcacgcccagcactgaggcgggcagtgcttcttccaccc
tccgggcagctgccagcaagctggagcaggggaagcgccccagcgaaacaccagcagcca
agcggctacgactggacactgggccccagagcttgtccgggaaatccactcctcagcccc
agtctgggaagtcaacccccagcagcatcgacgttcaagtgaccgaaaacgctgtgcgcc
gctacctgactcggaagcccatgaccaccaaggacctgcggaaaaagttccagaccaaga
agacggggctgagcagcgagcagacagtgaatgtgctggctcagatcctgaagcgcctga
accctgagggcaagatgatcaacgacaagatgcatttctccctcaaggagtga
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