Cervus canadensis (wapiti): 122440417
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Entry
122440417 CDS
T07554
Symbol
ATG4D
Name
(RefSeq) cysteine protease ATG4D isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04136
Autophagy - other
ccad04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122440417 (ATG4D)
04136 Autophagy - other
122440417 (ATG4D)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccad01002
]
122440417 (ATG4D)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccad04131
]
122440417 (ATG4D)
03029 Mitochondrial biogenesis [BR:
ccad03029
]
122440417 (ATG4D)
Peptidases and inhibitors [BR:
ccad01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
122440417 (ATG4D)
Membrane trafficking [BR:
ccad04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
122440417 (ATG4D)
Mitochondrial biogenesis [BR:
ccad03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
122440417 (ATG4D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
122440417
NCBI-ProteinID:
XP_043322595
LinkDB
All DBs
Position
4:complement(91955555..91964129)
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AA seq
472 aa
AA seq
DB search
MNSVSPAAAQYRSGSPEDARRPEGRRPRGPRTPDPNGLGPSGASGPALASAGTGPGEPDE
VDKFKAKFLTAWNNVKYGWAVKSRTSFSKISNVHLCGRRYRFEGEGDIQRFQRDFVSRLW
LTYRRDFPPLAGGSLTSDCGWGCMLRSGQMMLAQGLLLHFLPRDWTWSQGAGLGPPEPSG
LASPNRYRGPARWIPPRWAQAPELEQERRHRQIVSWFADHPRAPFGLHRLVELGQGSGKK
AGDWYGPSLVAHILRKAVESCSEVTRLVVYVSQDCTVYKADVARLVARPDPTAEWKSVVI
LVPVRLGGETLNPVYVPCVKELLRSELCLGIMGGKPRHSLYFIGYQDDFLLYLDPHYCQP
TVDVSQADFPLESFHCTSPRKMAFAKMDPSCTVGFYAGDRKEFETLCSELTRVLSSSSAT
ERYPMFTLVDGHAQDHSLDDLCSPPSQQTLRLPRSGRLLKAKRPSSEDFVFL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaactccgtgtcgccggccgccgctcagtaccggagcgggagtccggaggacgcgcgc
cgcccggagggccgcaggccgcggggaccccgaaccccggaccccaacggcctggggccc
tccggagctagcggccccgctcttgcatcggccgggaccggccccggagagccggacgaa
gtggacaagtttaaggcgaagttcctgaccgcttggaacaacgtcaagtacggttgggca
gtcaaaagccggaccagctttagcaagatctccaacgtccatctctgtggccgccgctac
cgcttcgagggcgagggtgacatccagcgtttccagcgggactttgtatcccgcctatgg
ctcacataccgccgcgacttcccacccctcgcgggaggcagcctgacctcagactgtggc
tgggggtgcatgttacgaagtgggcagatgatgctggctcagggccttctgcttcacttc
ctgcccagagactggacgtggtcccagggcgcaggcctgggcccccctgagccttcgggg
ttggcctctcccaaccggtaccgcgggcctgcccggtggatccctccgcgctgggcccag
gcccctgagctggagcaggagcgccggcaccggcagattgtgtcctggttcgctgaccat
ccccgggcccccttcggcctacaccggctggtggagctggggcagggctcaggcaagaag
gcaggcgactggtatgggccatctctggtggcacacatactcaggaaagctgtggagagc
tgctcagaggtcacccgcctggtggtgtacgtctcccaggactgcacagtatacaaggcg
gacgtggcacgcctggtggcccggccagaccctacggctgaatggaagtccgtggtcatc
ctggtaccagtgcggcttggtggagaaactctcaaccccgtgtatgtgccctgcgtgaag
gagctcctccgttcagagctgtgcctgggcatcatggggggcaagccccgccactcgctg
tacttcatcggctaccaggatgacttcctgctctacctggacccacactactgccagccc
accgtggatgtcagccaggccgacttccccctggagtccttccactgcacctcaccccgc
aagatggcctttgccaagatggacccaagctgtaccgtgggcttctatgctggagacaga
aaggagtttgaaacactctgctcagagctgaccagggtcctcagctcctcctcagccaca
gaacgataccccatgttcaccctggtcgatggccacgctcaggaccacagcctggatgac
ctctgctccccaccctcccagcagacactgcggctccctcgcagtggccggctcctcaag
gctaagcgcccaagttctgaggactttgtgtttttataa
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