Cervus canadensis (wapiti): 122440696
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Entry
122440696 CDS
T07554
Symbol
HDAC5
Name
(RefSeq) histone deacetylase 5 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04371
Apelin signaling pathway
ccad04613
Neutrophil extracellular trap formation
ccad05034
Alcoholism
ccad05203
Viral carcinogenesis
ccad05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
122440696 (HDAC5)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
122440696 (HDAC5)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
122440696 (HDAC5)
05203 Viral carcinogenesis
122440696 (HDAC5)
09165 Substance dependence
05034 Alcoholism
122440696 (HDAC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccad03036
]
122440696 (HDAC5)
Enzymes [BR:
ccad01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
122440696 (HDAC5)
Chromosome and associated proteins [BR:
ccad03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
122440696 (HDAC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
TFIIA
Motif
Other DBs
NCBI-GeneID:
122440696
NCBI-ProteinID:
XP_043323180
LinkDB
All DBs
Position
1:18584055..18620726
Genome browser
AA seq
1143 aa
AA seq
DB search
MNSPTESADGMPGREPALEILPRTPLHGIPVTVEVKPVLPGAMPSSMGGGGGGSPSPVEL
RGPLAGPVDPALREQQLQQELLALKQQQQLQKQLLFAEFQKQHDHLTRQHEVQLQKHLKV
STGARAPSPLSPALDAAHPASPLPLQQQQEMLAAKRQQELEQQRQREQQRQEELEKQRLE
QQLLILRNKEKSKESAIASTEVKLRLQEFLLSKSKEPTPGGLNHSLPQHPKCWGTHHASL
DQSSPPQSGPPGTPPSYKLPLLGPYDSRDDFPLRKTASEPNLKVRSRLKQKVAERRSSPL
LRRKDGTVISTFKKRAVEITGAGPGVSAVCNSAPGSGPSSPNSSHSTIAENGFTGSVPNI
PTEMLPQHRALPPDTSPNQFSLYTSPSLPNISLGLQATVTVTNSHLTASPKLSTQQEAER
QALQSLRQGGALTGKFMSTSSIPGCLLGVALEGDSSPHGHASLLQHVLLLEQARQQSTLI
AVPLHGQSPLVTGERVATSMRTVGKLPRHRPLSRTQSSPLPQSPQALQQLVMQQQHQQFL
EKQKQQQLQLGKILTKTGELPRQPTTHPEETEEELTEQQEALLGEGALTIPREGSTESES
TQEDLEEEEEEEEEEEEEEEDCIQVKDEERESGAEEGPDLEESSAGYKKAFADTQQLQPL
QVYQAPLSLATVPHQALGRTQSSPAAPGGMKSPPDQPTKHLFTTGVVYDTFMLKHQCMCG
NTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHSEYHTLLYGTSPLNR
QKLDSKKLLGPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVRMAVGCLVELAFKVAAGE
LKNGFAIIRPPGHHAEESTAMGFCFFNSVAITTKLLQQKLNVGKVLIVDWDIHHGNGTQQ
AFYNDPSVLYISLHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLT
AFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLAGGRVV
LALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPNINAVATLEKVIEIQSKHWS
CVQRFAAGLGRSLREAQAGETEEAETVSAMALLSVGAEQAQAAAAREHSPRPAEEPMEQE
PAL
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgaactctcccaccgagtcggcagatgggatgccaggccgggaaccagccttggaaatc
ctgccccggacccctctgcacggcatccctgtgacagtagaggtgaagccggtgctgcca
ggagccatgcccagctccatggggggcgggggaggaggcagccccagccccgtggagctg
cgggggcctctggcaggccccgtggaccccgcgctgcgggagcagcaactgcagcaggag
ctcctggcgctcaagcagcagcagcagctgcagaagcagctcctgttcgctgagttccag
aagcagcatgaccacctgacccggcagcatgaagtccagctgcagaagcacctcaaggtg
agcacgggggccagggcacccagccctctgagccctgccctggacgcggctcaccctgcc
tccccactgcccctgcagcagcagcaggagatgctggcagccaagaggcagcaggagctg
gagcagcagcggcagcgggagcagcagcggcaggaggagctggagaagcagcggctcgag
cagcagctgctcatccttcgaaacaaggagaagagcaaagagagtgccatcgccagcacc
gaggtgaagctacggctccaggaattcctcctgtcgaagtcaaaggagcccacaccaggc
ggcctcaaccattccctcccacagcatcccaaatgctggggaacccaccatgcttctttg
gaccagagttcccctccccagagcggccctcctgggacgcctccctcctataaactgcct
ttgcttgggccctacgacagccgcgatgacttccccctccgcaaaacagcctccgaaccc
aacttaaaagtacgttcgaggctaaagcagaaggtggccgagcggagaagcagtcccctc
ttgcgtcgcaaggacgggactgtcattagcacctttaagaagagagctgttgagatcaca
ggtgccggacctggggtgtccgccgtgtgtaacagcgcgccaggctctggccccagctct
cccaacagctcccacagcaccatcgcggagaatggctttacgggctcggttcccaacatc
cccaccgagatgctcccccagcaccgggccctccctccggacacctcccccaaccagttc
agcctctacacgtctccctctctgcccaacatctccctagggctgcaggccacggtcact
gtcaccaactcgcacctcaccgcctccccgaagctgtcgacgcagcaggaggccgagagg
caggccctccagtccctgcggcagggcggtgcactgaccggcaagttcatgagcacatcc
tccatccctggctgcctgctgggcgtggcactggagggcgactcgagcccccacgggcat
gcctcactgctgcagcatgtgctgctgctggaacaagcccggcagcagagcaccctcatt
gctgtgccgctccacgggcagtccccgctggtgacgggtgagcgcgtggccaccagcatg
cggacagtgggcaagcttccgcggcaccggcccctgagccgcacccagtcctcgccgctg
ccccagagcccccaggcgctgcagcagctggtcatgcagcaacagcaccagcagttcctg
gagaagcagaagcagcagcaactgcagctgggcaagatccttactaagacaggggagctg
ccacggcagcccaccacccaccccgaggagacagaggaggagctgacggagcagcaggag
gccttgctgggggagggagccctgaccataccccgagaaggctccacggagagtgagagc
acccaggaagacctggaagaggaggaagaggaggaggaggaagaggaggaggaggaggag
gactgcatccaggtcaaggatgaggagcgagagagcggtgctgaagaggggcccgacttg
gaggagtccagtgctggttacaaaaaggcatttgcagacacccagcagctgcagccgctg
caggtgtaccaggcgcccctcagcctggccactgtgccccaccaggccctgggccgcacc
cagtcctcacctgctgcccctgggggcatgaagagccccccagaccagcccaccaagcac
ctcttcaccacaggtgtggtctacgacacgttcatgctgaagcaccagtgcatgtgtggg
aacacacacgtgcaccccgagcacgctggccggatccagagcatctggtcccggctgcag
gagacaggcctgctcagcaagtgtgagcgaatccggggtcgtaaagccacgctggatgag
atccagacggtgcactccgagtaccacaccctgctctacggtaccagccccctcaaccgg
cagaagctggacagcaagaagctgctcggccccatcagccagaagatgtacgccatgctg
ccttgtgggggcattggggtggacagcgacactgtgtggaacgagatgcactcctccagt
gccgtgcgcatggcggtgggctgcctggtggagctggcattcaaggtggccgcaggggag
ctcaagaatggatttgccatcatccggcccccaggacaccacgcggaggaatccacagcc
atgggattctgcttcttcaattcagtagctatcacaaccaagctcctgcagcagaagttg
aacgtgggcaaggttctcatcgtggactgggacattcaccacggcaatggcacccagcaa
gcattttacaatgatccctctgtgctctacatctccctgcatcgctatgacaacgggaac
ttctttccgggctccggggctcctgaagaggttggcggagggccgggcgtggggtacaat
gtgaacgtggcatggacgggaggtgtggacccccccatcggagacgtggagtacctcacg
gccttcaggacagtggtgatgcccattgcccacgagttctcacctgacgtggtcctggtc
tccgctggctttgatgctgttgagggacacctgtctccgttgggtggctactctgtcacc
gccagatgttttggccacttgaccaggcagctgatgacgctggcagggggccgggtggtg
ctggccctggagggaggccacgacctgaccgccatctgtgatgcctctgaggcctgtgtt
tcggcactgctcagtgtggagctgcagcccttggacgaggcagtcttgcagcaaaagccc
aacatcaacgcagtggccacgctggagaaagtcatcgagatccagagcaaacactggagc
tgtgtgcagaggttcgctgctggcctaggccgttccctgcgggaggcccaggcaggtgag
acagaggaggctgagactgtgagcgccatggccttgctgtcggtgggggccgagcaggcc
caggcggctgcagcccgggagcacagccccaggccagcagaggagcccatggaacaggag
cctgccctgtga
DBGET
integrated database retrieval system
