Cervus canadensis (wapiti): 122440697
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Entry
122440697 CDS
T07554
Symbol
USHBP1
Name
(RefSeq) Usher syndrome type-1C protein-binding protein 1
KO
K21881
Usher syndrome type-1C protein-binding protein 1
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccad03037
]
122440697 (USHBP1)
Cilium and associated proteins [BR:
ccad03037
]
Primary cilia and associated proteins
USH complex and associated proteins
122440697 (USHBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USHBP1_PDZ-bd
TraH
Motif
Other DBs
NCBI-GeneID:
122440697
NCBI-ProteinID:
XP_043323176
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All DBs
Position
4:complement(103108454..103117527)
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AA seq
698 aa
AA seq
DB search
MSARATRPRSRRGRHALPGELDPVAESSEEAEAASGSSEPGPVASQDSAKLELLGPEVEA
KGQGLESRTDKEVDGDTSRGPAPAPEERPHEETHQAPEVAPQDKESIRSGPDVFQTLQQA
LSSLEATAAAWRHRPPNCPEPVEAKDRSQGAPKPCLEQEGAGSCQREAARLAERNAWLRL
ALGSREDELIRTQNSLKAFQAEKEMLQREVQELQDSLLRLEPFPPPSCDQAGGSVSGSSS
SGADGETWGSQDPFSRAHPLLRRLQSDSSTQMLGSLPTQPLAPEMHIMEAQMEQLRGKTE
KLKCFNRLLSAVLQEYKGRCEGLSMQLGQREAEATALRLALQYSEHCEEAYGALLTLREA
DSGAGKEAFMDDLEAAEKEAQRLLAQEKAAMDGVTLQDSYPSPEGSSVDRPTSQEVATQL
LGYVQRLQERRALVKIPPEPGSTWVPISTVPHAEAMVQAILGTQPGPALPRLEKMQIQQD
LAATRETLADLMLRLQLVRREKRALELREAALRAQGPAHVLLLEQLRWERAQLRTGGANS
SGGDSSGGGSSGDEEEWSQGPPALPGGCRGIDGGQVSKVQDPEELTQELSASLTRALGLR
EQLQSLREELEEVARKGRARRAQSTELNSDLCKAHSTLVMAFRGAHRKQEEQRRKLEQQM
TLMEARQAEELAVLEATERALGRSRLPCPPSRPGETFL
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccagggccacacggccccgaagccggcgagggagacacgctctgcccggtgag
ctggaccctgtggcagagagttcagaggaggctgaggcagccagtgggagctctgagccg
ggccctgtggcatctcaagatagcgccaagctggaactgttgggccctgaggtggaggcc
aaagggcagggcttggagagcaggactgacaaagaagttgatggggacactagcagggga
ccagccccagcccctgaggagcggccccatgaggaaacccaccaggccccagaggtagcc
ccacaggacaaggagagcatccgctctggacctgatgtatttcagactcttcagcaagcg
ctgagctctctggaagcaactgctgctgcctggcgccaccgtcccccaaactgtcctgag
ccagtggaggcaaaggacagaagccagggggcaccaaagccctgtttggagcaggagggg
gctgggagctgccagcgggaggcagccagattggctgaaaggaatgcctggctgcgtttg
gccctgggcagccgggaggatgagctgatccgcacacagaactctctgaaggccttccag
gctgagaaggagatgctgcagagagaggtccaggagctgcaggattccctgctgaggctg
gagcccttcccacctccttcctgtgaccaagcaggtggctcggttagtggttctagcagc
tctggggctgatggagagacctggggctcacaggatcccttctcccgggctcaccccctg
ctccggcgcctgcagagtgattccagcacccagatgcttgggtctctcccaacccagccc
cttgctcctgagatgcacatcatggaagcccagatggagcaactccgagggaaaactgag
aagctcaaatgcttcaaccgcctgctgtcagctgtgctccaggagtacaagggccggtgt
gagggcctcagcatgcagctgggccagcgggaggctgaggccactgcgctgcgtctggcc
ttgcagtatagtgaacactgtgaggaggcatatggagccttactcactctccgggaggca
gactcaggagctggaaaagaagccttcatggatgacttggaggcagctgagaaggaagct
cagaggctcctagcccaggagaaggctgccatggatggagtgacactgcaggattcatat
ccaagtcccgaaggcagcagtgtggataggcccacatcacaggaggtggctacccagctc
ctgggctatgttcagcgtctccaggaacgccgtgctctggtcaagattccccccgaacct
ggctccacctgggtgcccatatctaccgtgccccatgcagaagccatggtgcaggccatt
ctggggacccagcctggcccagccctgccccggctggagaagatgcagatccagcaggac
ctggcggccacacgggagactctggcggacctgatgctgcggctacagctggtgcggcgg
gaaaagcgggctctggaactgcgggaggctgccctccgagcccagggcccagcccatgtg
ctcctgctggagcagctgcgctgggagcgggcacagcttcggaccggcggggccaacagc
agtggtggagacagcagtggaggtgggagcagcggagatgaggaggagtggtcccagggt
cctcctgctctccctggcggctgcaggggtattgatggaggccaagtgagcaaagtgcag
gacccagaagaattgacccaggaactgtcagcatcactcactcgggctctgggcctgcgg
gagcagctgcagtctctgcgggaagagctagaagaggtggctcggaagggacgagccaga
cgtgctcagagtactgagctgaacagtgatttatgcaaagctcacagcacgttggtcatg
gccttccgaggtgcccaccggaagcaggaagagcaacggcggaagctggagcagcagatg
acactgatggaagcccgtcaggcagaggagctggccgtgctagaagccaccgaaagggcc
ctggggaggtccagacttccctgcccgccttcccggcctggggagacctttctctag
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