Cervus canadensis (wapiti): 122440754
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Entry
122440754 CDS
T07554
Symbol
LSM4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4 isoform X1
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03018
RNA degradation
ccad03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122440754 (LSM4)
09123 Folding, sorting and degradation
03018 RNA degradation
122440754 (LSM4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccad03019
]
122440754 (LSM4)
03041 Spliceosome [BR:
ccad03041
]
122440754 (LSM4)
Messenger RNA biogenesis [BR:
ccad03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122440754 (LSM4)
mRNA degradation factors
5'-3' decay
Lsm complex
122440754 (LSM4)
Spliceosome [BR:
ccad03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
122440754 (LSM4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
122440754
NCBI-ProteinID:
XP_043323323
LinkDB
All DBs
Position
4:complement(104076017..104105479)
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AA seq
168 aa
AA seq
DB search
MPWGRADHIVHKCPLFAAVNYIGAPPPLLPLPLSLLKTAQNHPMLVELKNGETYNGHLVS
CDNWMNINLREVICTSRDGDKFWRMPECYIRGSTIKYLRIPDEIIDMVKEEVVAKGRGRG
GLQQQKQQKGRGMGGAGRGVFGGRGRGGIPGTGRGQPEKKPGRQAGKQ
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgccttggggacgagctgatcatatagtccacaaatgtccactcttcgctgctgtgaat
tatatcggagccccgcccccccttctccctcttcccttgtcgctgctgaaaacggctcag
aatcacccaatgttggtggagcttaaaaacggggagacatacaacgggcacctggtgagc
tgtgacaactggatgaacatcaacttgcgtgaggtgatctgcacatccagggacggggac
aaattctggcggatgcccgagtgctacatccgcggcagcaccatcaagtacctgcgcatc
cccgacgagatcatcgacatggtcaaggaggaggtggtggccaagggccgtggccgcggt
ggcctgcagcagcagaagcagcagaagggccgcgggatggggggcgccgggcgaggtgtg
ttcggtggccggggccgaggtgggatccccgggactggcagaggtcaaccagaaaagaag
ccaggcagacaggcgggcaagcagtga
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