Cervus canadensis (wapiti): 122441585
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Entry
122441585 CDS
T07554
Symbol
DHX57
Name
(RefSeq) putative ATP-dependent RNA helicase DHX57 isoform X1
KO
K13026
ATP-dependent RNA helicase DHX57 [EC:
5.6.2.6
]
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ccad03012
]
122441585 (DHX57)
Enzymes [BR:
ccad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
122441585 (DHX57)
Translation factors [BR:
ccad03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
122441585 (DHX57)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
RWD
DEAD
HA2_C
zf-CCCH_4
zf-CCCH
HA2_N
Torus
zf_CCCH_4
zf-CCCH_2
nSTAND3
AAA_22
AAA_19
UBA
NPHP3_N
AAA_14
NB-ARC
Rad17
Viral_helicase1
Motif
Other DBs
NCBI-GeneID:
122441585
NCBI-ProteinID:
XP_043324302
LinkDB
All DBs
Position
5:complement(20557976..20617164)
Genome browser
AA seq
1383 aa
AA seq
DB search
MSSSVRRKGKPGKGGGKGSSRGGRGGRSHASKSHGGGSSGGGIGGNRKASSRIWDDGDDF
CIFSESRHSSRPSNSSVRKGDARPKWKPEAKVPLQTLHMTSENQEKVKALLRDLQEQDAD
AGSERGVSGEEEDDEPDYDDEQYWSPGREASLVPDSDPLECAGSGLVEPHRPEFTVSAFA
VHRLSRYGFHTEHCQAALRICDGDVGASLEHLLTQCFSETFGERMKISEAVAHISLDECV
EQRQEEAFALKSICGEKFIERIQNRVWTIGLELEYLTSKFCKFKQKESTKNIQEASLEIC
KFYLKGNCKFGSKCKFKHEVPPNQIVGRVERNVDDSHLNANEDASFLYELEVRFSKDHKY
PYQAPLVAFYSTNENLPLACRLHISEFLYGKALTFAETSEPVVYSLITLLEEESEITKLL
TNTHHKYSVPPVNFLPVSPGIRLNNPVCRKPVIPSNSFFSNQIPEVEKESEPEEETDEDE
GPAPVMVEDESYVNLKKKISKRYDWQAKSVHAENVKICKQFRIKQASRQFQSVLQERQSL
PAWEERENILKVLSKHQVLVISGMTGCGKTTQIPQFILDDSLNGPPEKVANIICTQPRRI
SAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDAALQGVTH
IIVDEVHERTEESDFLLLVLKDIVLQRPTLQVILMSATLNAELFSEYFNSCPVITIPGRT
FPVDQFFLEDAIAVTRYVLQDGSPYARSMKQMSKEKLKARRSRTAFEEVEEDLRLSLHLQ
DQDSVKDAVPDQQLDFKQLLARYQGVSKSVIKTMSIMDFEKVNLELIEALLEWIVDGKHS
YPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPT
GVTKIIISTNIAETSITINDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGR
AGRVASGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRL
IEPPHTDSLRASKIRLRDLGALTPDETLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPA
LTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALLRAYKGWQLSMKEGMRASYN
YCRQNFLSGRVLQEMASLKRQFTELLSDIGFVKEGLRAREIEKRAQGGGDGILDATGEEA
NSNAENPKLISAMLCAALYPNVVQVKSPEGKFQKTSTGAVRMQPKSDELKFVTKNDGYVH
IHPSSVNYQVRRFDSPYLVYHEKIKTSRVFIRDCSMVSVYPLVLFGGGQVNVQLQKGEFV
VSLDDGWIRFAAASHQVAELVKELRCELDQLLQDKIKNPSIDLCTCPRGSRIISMIVKLV
TTQ
NT seq
4152 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttcagtaagaaggaaaggcaagccagggaaaggaggtggaaaagggtcttcc
agaggaggaagaggaggcaggagccatgctagtaaatctcacgggggcggcagcagtggc
ggtggtattggtggcaatagaaaggcatcaagtagaatctgggatgatggcgatgacttt
tgtatcttcagtgaatcaaggcattcatccagacctagtaacagtagcgtgagaaaaggg
gatgcacgccccaaatggaagcccgaagccaaagtgcccctgcagactctacatatgact
tctgagaatcaagaaaaagtgaaagctcttctccgagacctgcaggaacaagatgcggat
gctggatctgaaagaggtgtttctggggaagaagaagatgatgagcctgattatgatgac
gagcagtactggtcacctggacgagaagcttccctggttcctgactctgatcctttggaa
tgcgctggctcaggcctggtggagcctcacaggccggaatttacagtgtcagcatttgca
gtgcacagactttccaggtatggtttccacactgaacactgtcaggcagccctgaggatt
tgcgatggagacgtcggggcatcactggaacacctgctcacccagtgcttttcagagaca
tttggagagaggatgaagatatctgaggcagttgcacacataagcttggatgagtgtgtg
gaacagcgacaggaagaggcatttgctctcaagtcaatctgtggagaaaaatttatagaa
agaattcaaaacagagtctggaccattggattagaactagagtatttgacaagtaaattc
tgcaaattcaagcaaaaggaaagtaccaaaaatatacaggaggcttcacttgaaatctgc
aaattttacctcaaaggaaattgtaaatttggatcaaagtgcaaatttaaacatgaagtg
cccccaaatcaaattgtcggaagagtcgaaagaaatgtagatgattctcatctaaatgct
aatgaagatgcatcctttttatatgaacttgaagttcgattttctaaagaccacaaatac
ccctaccaagctccccttgtggcattttattccaccaatgagaatctacctctggcttgt
cgtttacatatttctgagttcctttatggcaaagccttgacatttgcagaaacttcagaa
cctgttgtatattctttgataacccttttagaggaagaatcagaaataaccaagttacta
acaaatacccatcacaagtacagtgtccctcctgtgaactttctgccagtatcacctgga
atcagactaaataatcctgtctgtcgtaaaccagtgattccaagtaattcatttttttcg
aatcaaattccagaagttgaaaaagaatcagagcctgaggaggagacagatgaggatgaa
ggtccagcaccagtgatggtggaggatgaaagctatgtcaaccttaagaaaaagatttcc
aaaagatatgactggcaggcaaaatcagtacatgctgaaaatgtcaaaatctgcaagcag
ttccgaataaaacaggcctccagacagttccagtcagttctacaagaaagacagtcgctc
cctgcttgggaagaaagagaaaacattcttaaagtgttgagcaagcaccaagtgcttgtt
ataagtggtatgacgggatgtgggaaaaccacacagattccacagtttattctggatgac
tctctgaatggaccacctgagaaggtggctaacatcatctgtacccaaccccgacgaatc
tctgccatctctgttgctgagcgcgttgctaaagaaagggcagaaagagtgggtctgacc
gtgggataccagatccggttagaaagtgtcaagtcctcagccaccagattgttatactgc
accacaggagtgctgctaagaaggctggagggagacgcagctctacagggagtcacccat
atcattgttgatgaagttcatgagaggacagaagaaagtgacttcttactgctagttttg
aaagacattgtgttgcagagaccaactcttcaagttattctgatgagtgcaaccttaaac
gctgagctcttttcagaatattttaattcctgcccagttatcactataccaggtcgtaca
tttcctgttgatcagttttttctggaagatgcaattgctgtgacaaggtatgtgttgcag
gatggcagcccatatgcccgctccatgaaacagatgtcaaaggagaagctcaaggccagg
cgcagcagaaccgcgtttgaggaggtggaggaggacctgcgtctctccctgcacctccag
gatcaggattctgtcaaagatgcggtaccagatcagcagttagattttaaacagctcctt
gcccgctatcaaggagttagcaaatcagtcatcaaaacaatgtccattatggactttgaa
aaggttaatcttgaattaatcgaggccttgttagagtggattgtggatggaaagcactcc
taccctccaggtgctatacttgtatttttaccgggactagcagaaatcaaaatgctatat
gaacagctccagtctaattctcttttcaacaatagacgtagtaatcgatgtgttattcac
ccacttcattcttctttatccagtgaagagcagcaggctgtgtttgtaaaacctcctaca
ggtgtaactaagattataatttccaccaacatagctgagacatccataaccatcaatgat
gttgtctatgtcatcgattctgggaaaatgaaagaaaagagatatgatgccagcaaaggg
atggaaagtttagaggatacttttgtctctcaagccaatgccctgcaaagaaaaggtcga
gcaggtcgtgtagcgtctggggtttgcttccatttgttcaccagccatcacttcaatcac
caacttctaaagcagcagctaccagaaatacagagagtgccgttggaacagctctgtctg
agaattaaaattttagagatgtttagcactcacaatctccagtctgtgttctctcggctc
attgaacccccgcacactgattctcttcgtgcctcaaaaatacgattacgagacctggga
gcattaactccagacgaaacactgacccctctggggtatcacttggcctcgctgcctgta
gatgtgagaatcggcaaactaatgctgtttgggtccatcttccgatgtttggatcctgct
ctcaccattgctgccagtttagcttttaagtctccttttgtatctccctgggataaaaaa
gaggaagctaaccagaaaaagctagaatttgcatttgcaaacagtgattatctggccctt
ctacgagcatataagggatggcaactaagtatgaaagaaggtatgcgtgcaagttataat
tactgcagacaaaacttcttgtcaggaagagttcttcaggaaatggcaagcctgaaaaga
cagttcactgaactgttatcggacataggctttgttaaggagggactccgagcaagggaa
attgagaaaagggcccaaggaggaggagatggtatattggatgccacaggagaagaggca
aactcaaacgctgagaaccccaagttgatatcagcaatgctgtgtgctgctctgtatccg
aatgtagtgcaggtgaaaagcccagaggggaaatttcagaagaccagtactggagctgtc
agaatgcagccaaaatcagatgagttgaagtttgtcaccaagaacgatggatacgtacac
attcacccttcatcggtgaactatcaggtcagacgctttgacagtccctacctggtgtac
cacgagaagatcaaaacgagtcgcgtgttcatccgagactgcagcatggtgtctgtgtac
ccactggtcttgtttggaggaggccaggtgaatgtgcagctccaaaagggagagtttgtt
gtttccttggatgatggttggatccgctttgcagccgcttcccatcaggtggctgaatta
gtaaaggaacttcgttgtgaacttgaccagctcctccaggataagataaaaaacccaagc
atagatctgtgcacctgtcctcgagggtcacggatcatcagcatgattgtgaaacttgtc
accacacagtaa
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integrated database retrieval system
