KEGG   Cervus canadensis (wapiti): 122441650
Entry
122441650         CDS       T07554                                 
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
ccad  Cervus canadensis (wapiti)
Pathway
ccad01524  Platinum drug resistance
ccad03430  Mismatch repair
ccad05200  Pathways in cancer
ccad05210  Colorectal cancer
Brite
KEGG Orthology (KO) [BR:ccad00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    122441650 (MSH2)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    122441650 (MSH2)
  09162 Cancer: specific types
   05210 Colorectal cancer
    122441650 (MSH2)
  09176 Drug resistance: antineoplastic
   01524 Platinum drug resistance
    122441650 (MSH2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccad03400]
    122441650 (MSH2)
DNA repair and recombination proteins [BR:ccad03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     122441650 (MSH2)
SSDB
Motif
Pfam: MutS_V MutS_III MutS_II MutS_IV MutS_I AAA_27
Other DBs
NCBI-GeneID: 122441650
NCBI-ProteinID: XP_043324439
LinkDB
Position
5:28729481..28806749
AA seq 934 aa
MAVQPKDTLQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHREDALLAAREVFKT
QGVVKYMGPAGAKTLESVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLA
FKASPGNLSQFEDILFGNNDMSASIGVVGVKMSTVDGQRQVGVGYVDSAQRKLGLCEFPD
NDQFSNLEALLIQIGPKECVMPGGETAGDVGKLRQVIQRGGILITERKRADFSTKDIYQD
LNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYM
KLDIAAVRALNLFQGSVEDTSGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERL
NLVEAFVEDAELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGVNQLPNVIQA
LEKYEGKHQALLLAVFVTPLIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE
LREIMDDLEKKMQSTLISAARDLGLDPGKQIKLDSSTQFGYYFRVTCKEEKVLRNNKNFS
TVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQNAIVKEIVNISSGYVEPMQTLNDVLA
QLDAVVSFAHVSNAAPVPYVRPVILEKGRGRITLKASRHACVEVQDEVAFIPNDVHFEKD
KQMFHIITGPNMGGKSTYIRQTGVVVLMAQIGCFVPCEWAEVSIVDCILARVGAGDSQLK
GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF
ATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPRHV
IECAKQKALELEEFQNIGKPQECDGLEPAAKRCYLEREQGEKIIQEFLSKVKQVPFTEMS
EESITRKLKQLKAEVIAKNNSFVNEIISRIKVTA
NT seq 2805 nt   +upstreamnt  +downstreamnt
atggcggtgcagccgaaggacacgctgcagctggagagcgcggccgaggtcggctttgtg
cgcttcttccaaggcatgccggagaagccgaccaccacagtgcgcctttttgaccggggt
gacttctacaccgcgcaccgggaggacgcgctgctggccgcccgcgaagtgttcaagacc
cagggggtggtcaagtatatggggccggcaggagcaaaaactctggagagtgttgtgctt
agtaaaatgaattttgagtcttttgtaaaagatcttcttctagttcgtcagtacagagtt
gaagtttataagaacagagctggaaataaggcctccaaggagaatgattggtatttggca
tttaaggcctctccaggtaatctctctcagtttgaagatattctctttggtaacaacgat
atgtccgcttccattggtgttgtgggtgttaaaatgtctacagtcgatggtcaaagacag
gtcggagttgggtatgttgactccgcacagaggaagctaggactgtgtgagttccccgat
aatgatcagttctccaacctggaggctctcctgattcagattggaccaaaggagtgtgtt
atgccaggaggggagactgctggagacgtgggaaaactgaggcaggttattcagagagga
ggaattttgatcacagaaagaaaaagagctgacttttccacaaaagatatttatcaggac
ctcaaccggttgttgaaaggcaaaaagggagaacagatgaatagtgctgtgttgccagaa
atggagaaccaggttgcagtttcttccttgtctgcagtaatcaaatttttagaactctta
tcagatgactcaaactttggacagtttgaactgactacttttgacttcagccagtacatg
aaattggatattgcagcagtgagagcccttaaccttttccagggttctgttgaagatact
tctggctctcagtctctggctgcattgctgaataaatgcaaaacccctcaaggacaaaga
ctggttaaccagtggattaagcagcctcttatggacaagaacagaatagaagagagatta
aatttggtagaagcttttgtagaagatgcagaattgaggcagagtttacaagaagattta
cttcgtcgatttccagatcttaaccgacttgccaagaaatttcaaagacaagcagcaaat
ttacaagattgttaccgactctatcagggtgtaaatcaactccctaatgttattcaggct
ttggaaaaatatgaaggaaaacatcaggcattgttgctggcagtttttgtgactcctctt
attgaccttcgttctgacttctccaagtttcaggaaatgatagaaacaactttagatatg
gatcaggtggaaaaccatgaattccttgtaaaaccttcatttgatcctaacttgagtgaa
ttaagagaaataatggatgacttagaaaagaagatgcagtcaacattaataagtgcagcc
agagatctaggcttagatcctggcaaacagattaaactggattccagcacacagtttggc
tattatttccgagtaacgtgtaaggaagaaaaagtccttcgtaataataaaaatttcagt
actgtagatatccagaagaatggtgttaaatttacaaacagtaaactgacttctctcaat
gaagagtataccaaaaataaaaccgaatatgaggaagcccagaatgccattgttaaagaa
attgtcaatatttcttcaggctatgtagaaccgatgcagacactcaacgatgtgttagct
cagctggatgctgttgtcagctttgctcatgtgtccaatgcagcacctgttccctatgta
cggccagtcattttggaaaaaggacgagggagaattacactgaaagcatccagacatgct
tgtgttgaagttcaagatgaagtcgcatttattcctaatgatgttcactttgaaaaagat
aaacagatgttccacatcattactggtcccaatatgggagggaaatcaacatatattcgc
cagactggggtggtagttctcatggcccagattgggtgtttcgtgccgtgtgagtgggca
gaagtgtccattgtggactgcatcttggcccgcgtaggggctggtgacagtcagttgaaa
ggagtctccacgtttatggctgaaatgttagaaactgcttctatcctcaggtctgcaacc
aaagattccttaataatcatagatgaattgggaagaggaacctctacctatgatggattt
ggattagcgtgggctatatcagagtacattgcaacaaagatcggtgctttttgcatgttt
gcaacccattttcatgaacttacagccttggccaatcagataccaactgttaataatcta
catgtcacagcgctaactactgaagagacgttaactatgctatatcaggtgaagaaaggt
gtctgtgatcaaagttttgggattcatgttgctgagcttgctaatttccccaggcatgta
atagagtgtgctaaacagaaagccctggagttggaggagtttcagaatattgggaaacca
caggaatgtgatggactggaaccagcagcaaagaggtgctatctggaaagagagcaaggt
gaaaaaattattcaagagtttctatccaaggtaaagcaagtgccctttactgaaatgtca
gaagaaagcatcacaagaaagttaaaacagctaaaagctgaggtgatcgcaaagaataat
agttttgtaaatgaaatcatttcccgaataaaggtaactgcgtga

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