Cervus canadensis (wapiti): 122441680
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Entry
122441680 CDS
T07554
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04517
IgSF CAM signaling
ccad04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
122441680 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122441680 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccad04812
]
122441680 (SPTBN1)
Cytoskeleton proteins [BR:
ccad04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
122441680 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
122441680 (SPTBN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
PH_11
Motif
Other DBs
NCBI-GeneID:
122441680
NCBI-ProteinID:
XP_043324499
LinkDB
All DBs
Position
5:35642817..35843901
Genome browser
AA seq
2363 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVARELEAENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIGIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEKI
LSSDDYGKDLTSVMRLLSKHRAFEDEMSGRSGHFEQAIKEGEDMIAEEHFGSEKIRERIA
YIREQWAHLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEIANYRPTIDSLHEQAGALPQEHAESPDVRGRLAGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEQWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKEIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEISDVWEEMKTTLKNREASLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEIDNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQSLLSQSHAHQQFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDRIQEKVDSIDDRHRKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLDKIEKEGMQLISEKPETEAVVKEKLTGLHKMWEVLESTTQTKAQRLFDAN
KAELFTQSCADLDKWLHGLESQIQSDDYGKDLTSVNILLKKQQMLENQMEVRKKEIEELQ
SQAQALSQEGKSTDEVDSKRLTVQTKFMELLEPLNERKQNLLASKEIHQFNRDVEDEILW
VGERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIITDSSLNAE
AIRQRLADLKQLWGLLIEETEKRHRRLEEAHRAQQYYFDAAEAEAWMSEQELYMMSEEKA
KDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRALVADSHPESERISMRQSKVDKLYA
GLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFR
EFARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQIL
AASYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVR
QLQEDAARLQAAYAGDKADDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMVR
DLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARK
HYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLS
SREIGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRQQEEEERKRRPP
SPEPSTKVSEDTESQQQWDTSKGEQVSQNGLPAEQGSPRMAETVDTSEMVNGAAEQRTSS
KESSPIPSPTSDRKAKTALPAQSAATLPARTQETPSAQMEGFLNRKHEWEAHNKKASSRS
WHNVYCVINNQEMGFYKDAKTAASGIPYHSEVPVSLKEAICEVALDYKKKKHVFKLRLND
GNEYLFQAKDDEEMNTWIQAISSAISSDKHEVSASTQSTPASSRAQTLPTSVVTITSESS
PGKREKDKEKDKEKRFSLFGKKK
NT seq
7092 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccacagtagccacagactacgacaacattgagatccagcagcagtacagcgat
gtcaacaaccgctgggatgtggacgactgggacaacgagaacagctccgcgcggctcttt
gagcggtcacgcatcaaggctctggcagatgaacgtgaagctgtgcaaaagaagaccttc
accaagtgggtcaactcccaccttgcccgggtgtcctgccggatcacagatctgtacact
gaccttcgggatggacggatgctcatcaagctactggaggtcctctctggagagagactg
cctaaacccaccaagggacgaatgcgcatccactgtctggagaatgtggacaaggccctt
cagttcctgaaggagcagagagtccatcttgagaacatggggtcccacgacatcgtggat
gggaaccaccggctgaccctcggcctcatctggaccattatcctgcgcttccagatccag
gatatcagtgtagaaactgaagacaacaaagagaagaagtctgccaaggacgctttgctc
ttgtggtgccagatgaagactgctgggtaccccaacgtcaacattcacaatttcaccacc
agctggagggatggcatggccttcaacgcactaatacacaaacaccggcctgacctgata
gactttgacaaactaaagaaatccaatgcacactacaatctgcagaacgcctttaacctg
gcagagcaacaccttggcctcactaaactcttggaccccgaagatatcagtgtggaccac
cccgatgagaagtccattatcacttacgtggtgacttactaccactacttctcaaagatg
aaggccttggctgttgaaggaaaacgaattggaaaggtgcttgacaacgctattgaaaca
gaaaaaatgatcgaaaaatatgagtcccttgcctctgaccttctggagtggattgaacaa
accatcattattttgaacaatcgcaaatttgccaactcactcgttggggtccagcagcag
cttcaggcgttcaacacttaccgcactgtggagaagccccccaaatttactgagaagggg
aacttggaagtcctgcttttcaccattcagagcaagatgagggccaataaccagaaggtc
tacatgccccgggaggggaagctcatctctgacattaacaaggcctgggaaagactggaa
aaagcggaacacgagcgagaactggccctgcgaaacgagctcataagacaggagaaactg
gaacagctcgcccgcagattcgaccgcaaggcagctatgagagagacctggctgagtgag
aaccagcgtctggtgtcccaggacaactttggatttgaccttcccgctgtcgaggctgcc
acaaaaaagcacgaggccattgagactgacatcgccgcatacgaagaacgggtgcaggct
gtggtggctgtggccagggaattggaggcggagaactaccacgacatcaagcgcatcaca
gcgcgcaaggacaatgtcatccggctctgggagtacctgctggagctgctcagggcccgg
agacagcgcctcgagatgaacctggggctgcagaagatattccaggaaatgctctacatc
atggactggatggatgaaatgaaggtgctgttattgtctcaagactatggcaaacacttg
ctcggcgtggaagacctcttacagaagcacgccctggttgaagcagatattggcatccag
gcagagcgggtgagaggtgtcaacgcttctgcccagaagttcgcgactgacggggaaggt
tacaagccctgcgacccccaggtgatccgagaccgagtggcccacatggagttctgttac
caagagctttgccagctggcagctgagcgccgggcccgcctggaagagtcccgtcgcctc
tggaagttcttctgggagatggcagaggaagagggctggatccgggagaaggagaagatc
ctgtcctccgatgactacggcaaggacctcacaagcgtcatgcgcctgctcagcaagcac
cgggcgttcgaggatgagatgagcggccgcagcggccacttcgagcaggccatcaaggag
ggcgaagacatgattgccgaggagcacttcggatcagagaagatccgggagcggattgcc
tacatccgcgagcagtgggcccacctggagcagctctcagccattcgcaagaagcgcctg
gaggaggcctcgctgctgcaccagttccaggcggatgccgacgacatcgacgcctggatg
ctggacatcctcaagatcgtttccagcaacgacgtgggccacgatgagtactccacccag
tccctggtcaagaagcacaaggacgtggcggaggagatcgccaactaccggcccaccatc
gactcgctgcacgagcaggccggcgccctgccccaggagcacgctgagtcccccgacgtg
cggggccggctggcgggcattgaggagcgctacaaggaggtggccgagctgacgcggctg
cggaagcaggcactgcaggacactctggccctgtacaagatgttcagcgaggccgacgcc
tgtgagctctggattgatgagaaggagcagtggctcaacaacatgcagatcccagagaag
ctggaagacctggaggtcatccagcacagattcgagagtctcgaaccagagatgaacaac
caggcttctcgggtggcagtggtgaaccagattgctcggcagctgatgcatagtggccac
ccaagtgagaaggagatcaaagcccagcaggacaagctcaatacgaggtggagtcagttc
agggagctggtggaccggaagaaggatgcgctcctctccgccctgagcatccagaactac
cacctcgagtgcaacgaaaccaagtcatggatccgggagaagaccaaagtcatcgaatcc
acccaggacctgggcaatgacctggcgggtgtcatggccctgcagcgcaagctgaccggc
atggagcgggacctcgtggccatcgaggcgaaactgagtgacctgcagaaggaggccgag
aagctggagtccgagcaccccgaccaggcccaggctatcctgtctcggctggccgagatc
agtgacgtgtgggaggagatgaagaccacgctgaagaaccgtgaggcctccctgggagag
gccagcaagctgcagcagttcctgcgggacctggacgacttccagtcctggctctccagg
acacagacagccattgcctcggaggacatgcctaacaccctgaccgaggccgagaagctc
ctcacacagcacgagaacatcaaaaatgagatcgacaactacgaggaggactaccagaag
atgagggacatgggcgagatggtcacccagggccagacagacgcccagtacatgttcctg
cggcagcggctgcaggccctggacacaggctggaacgagctccacaagatgtgggagaat
aggcagagcctcctctcccagtcccacgcccaccagcagttcctgcgggacaccaagcag
gctgaagccttcctgaacaaccaggagtatgttttggcccatactgaaatgcccaccacc
ttggaaggagctgaagcagctattaaaaaacaagaggatttcatgaccaccatggatgcc
aatgaggagaagatcaacgcggttgtggaaacgggccggaggctggtgagcgatgggaac
atcaactcggatcgcatccaggagaaggtggactccatcgatgacagacacaggaagaat
cgcgaggcagccagtgagcttctgatgagactgaaggacaacagggatcttcagaaattc
ctgcaagactgtcaggagctgtctctctggatcaatgaaaagatgcttacagcccaggac
atgtcttacgacgaagccagaaatctgcacagtaaatggttgaagcatcaagcctttatg
gcagaactcgcttccaacaaagaatggcttgacaaaattgagaaggagggaatgcagctc
atttcagaaaagccagagacagaagccgtggtgaaggagaaactcacaggtttacataaa
atgtgggaagtccttgaatccaccacacagaccaaggcccagcggctcttcgatgcgaac
aaagccgaactcttcacccagagctgtgcagatctggacaaatggctgcatggcctggaa
agtcagattcagtctgacgactatggcaaagacctcaccagcgtcaacatccttctgaaa
aagcagcagatgctggagaatcagatggaggtgcggaagaaggagatagaagagctccag
agccaggcgcaggccctgagtcaggaggggaagagcacggacgaggtggacagcaagcgc
ctcaccgtgcagaccaagttcatggagctgctggagcccctcaacgagaggaagcagaac
ctgctggcctccaaggagatccatcagttcaaccgggacgtggaggacgagatcttgtgg
gttggtgagaggatgcctttggcgacctccacggatcatggccacaacctccagactgtg
cagctgttgataaagaaaaatcagaccctccagaaggagatccaggggcaccagcctcgc
atcgacgacatctttgagaggagccagaacatcatcactgacagcagcctcaacgccgag
gccatccggcagagactggccgacctgaagcagctgtggggcctcctcatcgaggagacg
gagaagcggcaccggcggctggaggaggcgcacagggcccagcagtactactttgacgcg
gccgaggccgaggcctggatgagcgagcaggagctgtacatgatgtccgaggagaaggcc
aaggatgagcagagcgccgtctccatgttgaagaagcaccagattctggaacaagctgtg
gaggactacgcggagacggtgcaccagctctccaagaccagccgggccctggtggccgac
agccatcctgaaagtgaacgtatcagcatgcggcagtccaaggtggacaagctgtacgca
ggcctcaaggacctggctgaggagaggcggggcaagctggatgaaagacaccgcctgttc
cagctcaaccgcgaggtggacgacctggagcagtggattgccgagagggaggtggtcgcg
gggtcgcacgagctgggccaggactacgagcacgtcacgatgctccaagagcgattccga
gagttcgcccgggacacggggaacattgggcaggaacgcgtggacacagtcaaccacatg
gcagacgagctcatcaactccggacattcagatgccgctactatcgctgagtggaaggat
gggctcaacgaggcttgggctgacctcctggagctcattgacactagaacacagatcctc
gctgcctcctatgaactgcacaagttttaccacgacgccaaggagatctttggacgcatc
caggacaaacacaagaaactccccgaggagctcgggagagatcagaacacagtggagacc
ttacagagaatgcacaccacctttgagcatgacatccaggccctgggcactcaggtgcgg
cagcttcaggaagatgcggcccgcctccaggcagcctacgcaggcgacaaggccgacgac
atccagaaacgggagaacgaggtgctggaagcctggaaggccctgctggacgcctgcgag
ggccgcagggtgcggttggtggacacaggagacaagttccgcttcttcagcatggtgcgc
gacctcatgctatggatggaggacgtcatccggcagatcgaagcccaggagaagccccgg
gatgtgtcatctgttgagctattgatgaataatcatcaaggtatcaaagctgaaatcgat
gctcgtaatgacagttttacgacctgcattgaactggggaaatccctgctggcgaggaag
cactacgcatctgaggagatcaaggagaagttactgcagttgacggaaaaaagaaaagaa
atgattgacaagtgggaagaccgatgggagtggttaagactgatcttggaggtccatcag
ttctcaagggatgccagtgtggctgaggcctggctgctcgggcaggagccctacctgtcc
agccgagagataggccagagcgtggacgaggtggaaaagctcatcaagcgccatgaggct
tttgaaaagtctgcagcgacctgggacgagaggttctctgccctggaaagactgacgacg
ttggagctactggaagtgcgcagacagcaagaggaagaggagaggaagaggcggccgccc
tcccctgagccgagcacgaaggtttccgaggatactgagtcccagcagcagtgggatact
tcaaaaggagagcaagtttcccagaatggtctgccggctgaacagggatctccacggatg
gcagaaacagtggacaccagtgaaatggtcaatggcgctgcagaacagaggacgagctcg
aaggagtccagccccatcccctccccgacctccgatcgcaaagccaagactgctctccca
gcccagagtgccgccaccttgccagccaggacccaggagacgccctcggcccagatggaa
ggcttcctgaaccgaaagcatgagtgggaggcccacaataagaaggcctcaagcaggtcc
tggcacaatgtttattgtgtcataaataaccaagaaatgggtttctacaaagatgcaaag
acagctgcttcagggattccctaccacagcgaggtccctgtgagtttgaaagaagccatc
tgtgaagtggcccttgattacaagaagaagaagcatgtgttcaagctcagactaaatgac
ggcaatgagtacctcttccaagccaaagatgatgaggaaatgaatacatggatccaggcc
atctcctctgccatctcctctgataaacacgaggtgtctgccagcacccagagcacgcca
gcatccagccgggctcagaccctgcccaccagcgtcgtcaccatcaccagcgagtccagt
cccggcaaacgggagaaggacaaagagaaagacaaagaaaagaggttcagcctttttggc
aaaaagaagtga
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integrated database retrieval system
