Cervus canadensis (wapiti): 122441689
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Entry
122441689 CDS
T07554
Symbol
PNPT1
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial isoform X1
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122441689 (PNPT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccad03019
]
122441689 (PNPT1)
03016 Transfer RNA biogenesis [BR:
ccad03016
]
122441689 (PNPT1)
Enzymes [BR:
ccad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
122441689 (PNPT1)
Messenger RNA biogenesis [BR:
ccad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
122441689 (PNPT1)
Transfer RNA biogenesis [BR:
ccad03016
]
Prokaryotic type
tRNA degradation factors
122441689 (PNPT1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
PNPase
S1
KH-I_KHDC4-BBP
S1_2
Motif
Other DBs
NCBI-GeneID:
122441689
NCBI-ProteinID:
XP_043324535
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All DBs
Position
5:complement(36714229..36757197)
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AA seq
784 aa
AA seq
DB search
MAACRHCCSCLRLRPLGDGPLRLPGRDRTLTQLQVRALWGGTGQRSVAVDLGSRKLEISS
GKLARFADGSAVVQSGDTAVMVTAVSKTKPSPSQFMPLVVDYRQKAAAAGRIPTNYLRRE
IGSSDKEILTSRVIDRSIRPLFPAGYFYDTQILCNLLAVDGVNEPDVLAINGASVALSLS
DIPWNGPIGAVRIGMIDGECVVNPTRKEMANSTLNLVVTGAPKSQIVMLEASAENILQQD
FCHAIKVGVKHTQQIIQGIQQLVKENGVIKRTPQKLFVPSPEIVRHAHKLAMEKLYAVFT
DHEHDKISRDEAVNKIRLDTEEQLKEKFPEVDSYEIIESFNVATKDVFRSIILNEYKRCD
GRDLTSLRNINCEVDMFKILHGSSLFQRGQTQVLCTVTFDSLESNFKSDRIITAINGIKD
KNFMLHYEFPPYATNEIGKVTGVNRRELGHGALAERALYPVIPKDFPFTIRVTSEVLESN
GSSSMASACGGSLALMDAGVPISSAVAGVAIGLVTKNNPDKGEIEDYRLLTDILGIEDYH
GDMDFKIAGTSKGITALQADIKLPGIPIKIVMEAIQQASVAKKEILQIMNKTISKPRASR
KENGPVVETVQVPLSKRAKFVGPGGYHLKKLQAETGVTISQVDEETFSIFAPTPSAMHEA
RDFITDICKDDQEQQLEFGAVYTATITEIRDTGVMVKLYPNMTAVLLHNTQLDQRKIKHP
SALGLEVGQEIQVKYFGRDPADGRMRLSRKVLQSPATTVVKTLNDRSSIVMGESVSQSSS
NSSR
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctgcaggcactgctgctcgtgcctccggctgcggcctctgggcgatggtccc
ctccgtctgccagggcgggataggacactcacccagttacaggtgcgagcactatggggt
ggcaccggacagcgatccgtggccgtggatttaggcagcagaaaattagaaatatcctct
ggaaaactggccagatttgcagatggctctgctgtggtacagtcaggtgacactgcagtg
atggtcacagcagtcagtaaaacaaaaccttcaccttcccaattcatgcctttggtggtt
gactatagacagaaggctgctgcagcaggtagaattcccacaaactatctcagaagagag
attggatcttctgataaagaaattcttacaagtcgagtaatagatcgttcaattagacct
ctctttccagctggctacttttatgatacacagatcctttgtaatctgttggcagtagat
ggtgttaatgaacctgatgtcctagcaattaatggtgcttctgtagccctctcattatca
gatattccttggaatggacctattggggcagtacgaataggaatgattgatggagaatgt
gtagttaacccaacacgaaaagaaatggcaaacagtactttaaatttagtggttactgga
gcacctaaaagtcagattgtcatgttggaagcctctgcagagaatattttacagcaggac
ttttgccatgctatcaaagtgggagtaaaacatacacaacaaataattcagggcatccag
cagttggtaaaagaaaatggtgttatcaagaggacacctcagaagttatttgtcccttcg
ccagagattgtcagacacgctcataaactcgccatggaaaaactctacgcagtttttaca
gatcatgaacatgataaaatttccagagatgaagctgttaacaagattaggttagataca
gaggaacaactaaaagaaaaatttccagaggttgattcctatgaaataatagaatccttc
aatgttgctacaaaggatgtttttagaagtattattttgaatgagtacaaaaggtgtgac
ggtcgagatttgacttcacttaggaatataaattgtgaggtagatatgtttaagattctt
cacggatcgtcattatttcagaggggacagacacaggtgctttgtactgttacatttgat
tcattagaatctaattttaagtcagaccgaattataacagctataaatgggataaaagat
aaaaatttcatgctgcactatgagtttcctccctatgcaactaatgaaattggcaaagtt
actggtgtaaatagaagagaacttgggcatggtgctcttgctgagagagctctgtatcct
gttattcctaaagattttcctttcaccataagagtcacatcggaagtactagagtcaaat
ggatcatcttctatggcatctgcatgtggtggaagtttagcattaatggatgcaggagtt
ccaatttcatctgctgtggcaggtgtggcaataggattggtcaccaaaaacaatcctgac
aaaggtgaaatagaagactatcgtttgctgacagatattctggggattgaagattaccat
ggtgacatggatttcaaaatagctggcacttctaaaggaataactgcattgcaggctgac
atcaaattacctggaataccaataaaaattgtaatggaagccattcagcaagcctcagtg
gcaaaaaaggagatattacagataatgaacaaaactatttcaaaacctcgagcatctaga
aaagaaaatggacctgttgtagaaactgttcaggttccgttatcaaaacgagcaaaattt
gttggaccaggtggatatcatttaaaaaaacttcaggctgaaacaggagtcactatcagc
caggtagatgaagaaacattttctatctttgcaccaacacctagtgccatgcatgaagca
agagacttcattactgatatctgcaaagatgatcaagagcagcaattagaatttggagca
gtgtacaccgccacaataactgaaatcagagacactggagtaatggttaaactctatcca
aatatgactgcagtactactccacaacacacaacttgatcaacgaaagattaaacatccc
agtgctttaggattagaagttggccaagaaattcaggtgaaatactttggacgtgatcca
gctgatggaagaatgaggctttctcgtaaagtgctccagtctccagctacaactgttgtg
aaaactttaaatgacagaagtagtattgtaatgggagaatctgtttcacagtcatcatct
aattcttcccggtga
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