Cervus canadensis (wapiti): 122441772
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Entry
122441772 CDS
T07554
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccad03041
]
122441772
Spliceosome [BR:
ccad03041
]
Common components
Common spliceosomal components
General mRNP proteins
122441772
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
PRP38_assoc
RBD_DEAH11
POP1_C
IHO1
Motif
Other DBs
NCBI-GeneID:
122441772
NCBI-ProteinID:
XP_043324709
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All DBs
Position
5:46533673..46536502
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AA seq
530 aa
AA seq
DB search
MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCRQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKRYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQP
LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPS
IAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatattgatattgaagcaatgcttgaggctccttacaagaaggatgagaac
aagttgagcagtgctaacggccatgaagaacgtagcaaaaagaggaaaaaaagcaagagc
agaagtcgtagtcatgaacgaaaaagaagcaaaagtaaggaacggaagcgaagtagagat
agagaaaggaaaaagagcaaaagccgtgaaaggaagcgaagtagaagcaaagaaaggaga
cggagccgttcaagaagtcgagatcgcagattcagaggccgctacagaagtccttactcc
ggaccaaaatttaacagtgccatccgaggaaagattgggttgcctcatagcatcaaatta
agcagacgacgttctcgaagcaaaagtccattcagaaaagacaagagccctgtgagggaa
cctattgataatctcactcctgaggaaagagatgcaaggactgttttctgcaggcagctg
gcagcaagaattcggccaagggatttggaagagtttttctctacagttggaaaggttcgt
gatgtgaggatgatttctgacagaaattcaagacgttccaaaggaattgcttatgtggag
tttgttgatgttagctcagtgcctctagcaataggattaactggtcagcgggttttagga
gtgccgatcatagtacaagcatcacaggcagagaaaaacagagctgcagcaatggcaaac
aatctacaaaagggaagtgctggacctatgaggctttatgtgggctcgttacactttaac
atcactgaagatatgcttcgagggatttttgagccatttggaaggattgaaagtatccag
ctcatgatggatagtgaaacaggtcgatccaagcgatatggatttattacgttttctgat
tcagaatgtgccaagaaagctttggaacaacttaatggatttgagctagcgggaaggccc
atgaaagttggtcatgttactgaacgtactgatgcttccagtgctagctcatttttggac
agtgatgaactggaaaggactggaattgacttgggaacaactggtcgtctccagttaatg
gcaagacttgcagagggtacaggtttgcagatcccgccagcagcacagcaagctttgcaa
atgagtggctctttggcatttggtgctgtggcagaattctcttttgttatagatttgcaa
acaagactttcccaacagactgaagcttcagcgttagctgcagctgcctctgttcaacct
ctggcaacacagtgtttccaactctctaacatgtttaatcctcaaacagaagaagaagtt
ggatgggatacagagattaaagacgatgtgattgaagaatgtaacaaacatggaggagtt
attcatatttatgttgacaaaaattcagctcagggcaatgtgtatgtgaagtgcccatcg
attgctgcagccattgctgctgtcaatgcgttgcatggcaggtggtttgcgggtaaaatg
ataacagcagcatatgtacctcttccaacttatcacaacctcttccctgactctatgaca
gcaacacaactactggttccaagtagacgatga
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