Cervus canadensis (wapiti): 122441827
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Entry
122441827 CDS
T07554
Symbol
VPS54
Name
(RefSeq) vacuolar protein sorting-associated protein 54 isoform X1
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccad01009
]
122441827 (VPS54)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccad04131
]
122441827 (VPS54)
Protein phosphatases and associated proteins [BR:
ccad01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122441827 (VPS54)
Membrane trafficking [BR:
ccad04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
122441827 (VPS54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
EXOC6_Sec15_N
SBP_bac_6
DCP1
Motif
Other DBs
NCBI-GeneID:
122441827
NCBI-ProteinID:
XP_043324809
LinkDB
All DBs
Position
5:complement(58918560..59028520)
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AA seq
977 aa
AA seq
DB search
MASSHSSSPVPQGSSSDVFFKKEVDPTKHVRPVQSLPDVCPKEPTGDSNSLCVAPSLVTD
QHRWTIYHSKVNLPAALNDPRLAKRESDFFTKTWGLDFVDTEVIPSFYLPQISKEHFTVY
QQEISQREKIHERCKNICPPKDTFDRTLLHTHDKSRTDLEQVPKIFMKPDFALDDSLTFN
SVLPWSHFNTAGGKGNRDAASSKLLQEKLSHYLDIVEVNIAHQISLRSEAFFHAMTSQHE
LQDYLKKTSQAVKMLRDKIAQIDKVMCEGSLHILRLALTRNNCVKVYNKLKLMATVHQTQ
PTVQVLLSTSEFVGALDLIATTQEVLQQELQGIHSFRHLGSQLCELEKLIDKMMIAEFST
YSHSDLNRPLEDDCQILEEERLISLVFGLLKQRKLNFLEIYSEEMIITAKNIIKQCVINK
VSQIEDIDTDVVLKLADQMRMLNFPQWFDLLTDIFSKFTIFLQRVKATLNIIHSVVLSVL
DKNQRTRELEEISQQKNAAKDNSLDTEVAYLIHEGMFISDAFSESELTPIAIDTTSQRNA
SPNSEPCSSDSVSEPECTTDSSSSKELISSSVTPGAVDIMVNEDVKLTDLELGKLANNIQ
ELLYSASDICHDRAVKFLMSRAKDGFLEKLNSTEFISLSRLMETFILETEQICGRKSMSL
LAALQSQANKFVNRFHEERKTKLSLLLDNERWKQADVPAEFQDLVDSISDGKIALPEKKS
GATEDRKPAEVLTVEGQQYAVVGTVLLLIRIILEYCQCVDNIPSVTTDMLTRLSDLLKYF
NSRSCQLVLGAGALQVVGLKTITTKNLALSSRCLQLIVHYIPVIRAHFEARLQPKQYSML
RHFDHITKDYHDHIAEISAKLVAIMDSLFDKLLSKYEVKAPVPSACFRNICKQMAKMHEA
IFDLLPEEQTQMLFLRINASYKLHLKKQLSHLNVINDGGPQNGLVTADVAFYTGNLQALK
GLKDLDLNMAEIWEQKR
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaagccacagttcttcaccagtgcctcaaggaagcagcagtgatgttttcttt
aaaaaagaggtagacccgacaaaacacgttcgacctgtgcagtcactgccagatgtgtgt
cccaaggaacccacaggtgattcaaatagtttatgtgttgccccatctctagttacagat
caacatagatggactatatatcattccaaagtaaatctcccagcagcattaaatgatcct
agattagcaaaaagagaatctgacttcttcacaaaaacatggggattggactttgtggac
actgaagtcataccttcattctacctcccacagatcagcaaggaacattttacagtatat
caacaggaaatctctcagagagagaagattcatgagagatgcaagaatatttgtccccct
aaagatacctttgacagaactctcttacatactcatgataaatccaggacagatctggag
caagtacctaagatttttatgaaaccagattttgccttggacgattccttaacttttaat
tcagttttaccatggtctcattttaatactgctggtggaaaaggaaatcgtgatgcagct
tcctcaaagttgctacaagaaaagctgagccattatctggatattgtggaagtaaacatt
gctcaccagatctctctacgttcagaagcattttttcatgcaatgacctctcaacatgaa
ttgcaggactacctcaagaaaacttcccaggctgtaaaaatgcttcgagataaaattgca
cagattgataaagtaatgtgtgaaggatcactacacattttaagactggcacttaccaga
aataattgtgttaaagtatataataaactgaaattaatggccactgtacaccagactcag
cctacagtacaggtgttgttatctacttctgaatttgttggagcattggacttaatagca
acaacacaagaggttctacagcaggaacttcagggcattcatagtttccggcatttggga
tcacagctttgtgaattagaaaaactgatagataaaatgatgattgcagaattttctact
tattctcacagtgacttaaatagaccattggaagatgactgtcaaattttagaagaggaa
agactaatctctcttgtatttggacttttaaaacaaagaaaacttaattttttagaaata
tatagtgaagaaatgattattacagcaaagaatatcattaaacagtgtgtgattaataaa
gtttcacaaatagaagatatagacacagatgttgttttgaagcttgcagatcagatgaga
atgttgaattttcctcagtggtttgatttactaacagatattttctccaagtttacaatt
ttccttcagagagttaaggcaaccttaaatatcattcatagtgttgttctctcagttctt
gataaaaaccaaaggactagagaattggaagagatttcacaacagaaaaatgctgcaaaa
gataattcactagacacagaagtggcttatttaatccatgaaggcatgtttataagtgat
gcattcagtgagagtgaattaacacctatagccatagatactacctctcaaagaaatgca
tctccaaatagtgagccctgcagcagtgattctgtatctgaaccagaatgtactactgat
tcttcatccagcaaagagctgatatcatcatctgttactccaggagctgtggatattatg
gtcaatgaagatgtgaaattaactgacttagagctaggaaagctggcaaataatatccag
gagttattatatagtgcctcagatatatgccatgatcgagctgtcaaatttctcatgtca
agagctaaggatggttttcttgagaagctaaattccacggaattcatatcactttccaga
ttaatggaaacattcattttagaaactgaacagatatgtggaagaaaaagcatgtcatta
cttgcagcacttcagagccaagcaaataaatttgtaaataggtttcatgaagagagaaaa
accaaactcagccttctcttagacaatgaacgctggaagcaagctgatgttcctgcagaa
tttcaggatcttgttgattctatatcagatggaaagattgctttacctgaaaaaaaatca
ggggctacagaagatagaaaaccagctgaagttcttactgttgaggggcaacaatatgct
gttgttggaactgtattgctgttgataagaattatccttgaatattgccagtgtgtggat
aatatcccatctgttactactgacatgctcactcgtctatcagacttattgaagtacttc
aattcaagaagttgccagttagttcttggagctggtgcactgcaagttgttggactaaaa
acaataactacaaaaaatctggctctttcttcacgctgtttgcagttaattgtgcactac
attcctgtgatccgggctcattttgaagctcgactgcaacctaagcaatacagtatgctt
aggcattttgatcatatcactaaggactaccatgaccacatagctgaaatatcagctaag
cttgtagcgataatggatagcttatttgacaagctgttatctaagtatgaagtgaaagct
cccgttccttctgcctgtttcaggaatatttgtaagcaaatggcaaaaatgcatgaagct
atatttgatctgcttcctgaagaacaaacgcaaatgttatttttaagaattaatgcaagt
tacaaactccacttgaaaaagcagttatctcacttaaatgtgataaatgatggaggacct
caaaatgggttggtcacagcagatgtagctttttacactggaaatcttcaagccttaaaa
ggccttaaagatttggacctaaatatggccgagatatgggaacagaaaaggtga
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