Cervus canadensis (wapiti): 122441862
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Entry
122441862 CDS
T07554
Symbol
APLF
Name
(RefSeq) aprataxin and PNK-like factor isoform X1
KO
K13295
aprataxin and PNK-like factor [EC:3.1.-.-]
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccad03400
]
122441862 (APLF)
DNA repair and recombination proteins [BR:
ccad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
122441862 (APLF)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
122441862 (APLF)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCHH
FHA_2
FHA
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
122441862
NCBI-ProteinID:
XP_043324866
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Position
5:63251123..63342303
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AA seq
508 aa
AA seq
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MSGGFELQPQDGGPRVALAPGETVIGRGPLLGITDKRVSRRHAILEVVGGKLRIKPLHTN
PCFYQSSEKSQLLPLKTNMWCWLNPGDRFSFLVDKYIFCVLSTHSEMEMECTLRNSQMLD
EDDILNETPKSSSVDLPVKTPSAPQLGRSIETAETQTTVNNVSFIGESRDLSQQQPNPSQ
RKRILPAWMLTENSSDQNLSVISEDNNVTRESEKERVCKEKTQVNITQQGKKRLISSGSS
ESTSAEQDTGKKCKNDDQEESIISSKEMPQSFSAATLHNTEVNNANTNPQRSKIPVEALG
KVSEHKIITKGSSNKDSVVRSCSESCSSTQSKSFCDEPQKSQPESSSNPPSPECVQKATD
PVSHGSEENKVQRTSCMYGANCYRKNPVHFQHFSHPGDSDYGGVNITCQDEADDRPECPY
GASCYRKNPQHKIEYRHSTFPVRSISDEDDSVGQPNEYNLNDSFIDDEEEGYEPTDEDSD
WEPEKEDLEKEDMEGLLKEARKFMKRKK
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtccgggggcttcgagctgcagccgcaggacggcggcccccgggtggccctggcgccc
ggggagacggtcatcggccgcgggccgctgctgggaataacagataagagagtgtccaga
agacatgccattcttgaagtggtgggtggtaagcttcgaatcaaaccgctacacacaaat
ccatgtttttatcagtcttctgagaagagccagctcttaccattgaagacaaatatgtgg
tgctggttgaatcctggagatcgtttttctttcttagttgacaaatacattttctgtgtc
ttgtctacacattctgaaatggaaatggagtgtactttaagaaatagtcaaatgcttgat
gaagatgatatattgaatgaaacaccaaaatcttcctcagttgatttgcctgttaaaaca
cccagtgccccacaactgggaagaagcatagaaacagcagagacccagaccactgtaaat
aatgtgtctttcataggtgaaagtagagacttgagtcagcaacagccaaatccttcccag
aggaaaagaatcctcccagcatggatgttgacagaaaattcaagtgatcagaacctttca
gtcatcagtgaagataataacgtaacccgggaaagtgaaaaagaaagagtctgcaaagaa
aaaacccaagtaaacataacacagcaaggaaaaaagcgattaatttcatcaggaagttca
gaaagtacatcagcagagcaagacacaggaaaaaagtgcaaaaatgatgatcaggaagag
tctatcatttcatccaaggaaatgccacagtcattttctgcagccacattacataacaca
gaggtaaataacgctaatactaatccacagagaagcaaaatcccagtagaggcacttggt
aaggtttctgaacataagatcatcactaagggaagttcaaataaagacagcgtggtgaga
agttgttctgagagttgttccagtacccagagcaagtctttctgtgacgagcctcaaaaa
tctcaacctgaatccagctctaatccgcccagtcctgaatgtgtgcagaaggcaaccgat
ccagtttcacatggttctgaagaaaacaaggtccagagaacgtcctgcatgtatggggca
aactgctacaggaaaaatcctgtccattttcaacatttcagtcaccctggtgatagtgat
tatggaggtgtaaacatcacgtgtcaagatgaagctgatgaccggcctgaatgtccttat
ggagcatcttgttataggaagaatccccagcacaagatagaatatagacatagtacattt
ccagtgagaagcatttcagatgaagatgacagtgttgggcaacccaatgagtacaacctg
aatgacagctttatagatgatgaggaagaaggatacgagccaacagacgaagattccgac
tgggaaccagaaaaggaagacctagagaaggaagatatggaagggcttttgaaagaagca
agaaagtttatgaaaagaaaaaagtaa
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