Cervus canadensis (wapiti): 122442032
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Entry
122442032 CDS
T07554
Symbol
SDC1
Name
(RefSeq) syndecan-1
KO
K06257
syndecan 1
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04512
ECM-receptor interaction
ccad04514
Cell adhesion molecule (CAM) interaction
ccad04820
Cytoskeleton in muscle cells
ccad05144
Malaria
ccad05205
Proteoglycans in cancer
ccad05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122442032 (SDC1)
04514 Cell adhesion molecule (CAM) interaction
122442032 (SDC1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122442032 (SDC1)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
122442032 (SDC1)
09174 Infectious disease: parasitic
05144 Malaria
122442032 (SDC1)
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
122442032 (SDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccad04131
]
122442032 (SDC1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ccad04090
]
122442032 (SDC1)
00535 Proteoglycans [BR:
ccad00535
]
122442032 (SDC1)
Membrane trafficking [BR:
ccad04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
122442032 (SDC1)
CD molecules [BR:
ccad04090
]
Proteins
122442032 (SDC1)
Proteoglycans [BR:
ccad00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
122442032 (SDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndecan
Romo1
Motif
Other DBs
NCBI-GeneID:
122442032
NCBI-ProteinID:
XP_043325238
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All DBs
Position
5:74575276..74599809
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AA seq
312 aa
AA seq
DB search
MRRAALWLWLCALALRLQPALPHSVAVNMPPEDQDGSGDDNDNFSGSGAGALPDITSSQI
PSTWKDLGPLTTTATAPEPTSPDAIAASTTVLPTREQPEGGGPVLLAEAEPGLTAQEKEA
FHPPSKTTLHPTAHRVSTARATTAPGPATSHPHRDVQPDHHETSAPTGRGHLEPHTPHME
DGGPPATENAAGEDPSTQVPVVEGSGEQDFTFDVSGENAAGAAVEPGSRNGAPGDPEATG
ATGASQGLLDRKEVLGGVIAGGLVGLIFAVCLVGFMLYRMKKKDEGSYSLEEPKQANGGA
YQKPTKQEEFYA
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgcgcggcgctctggctgtggctctgcgcgctggcgctgcgcctacagccggcc
ctcccgcacagtgtggccgtaaacatgccccctgaagatcaggatggctctggggatgac
aatgacaacttctctggctcgggcgcaggtgctctgccagatatcacctcgtcacagata
ccctccacctggaaggacctggggcctctgacgaccacagccacggctccagagcccacc
agcccagacgccatcgccgcctccaccaccgtcctgccaaccagagagcagcctgagggg
ggcgggccggtgctcctggcagaggcggagcctggcctcaccgcccaggagaaggaggcc
ttccacccacccagcaagaccacgctgcacccgaccgctcaccgggtgtccacagccaga
gccaccacagccccgggacccgccacctcccatccccacagggacgtgcagcccgaccac
catgagacctcagctcccacaggccggggccatctggagccgcacacgccccacatggag
gatggaggtcctcctgccactgagaacgcggctggggaggacccctccacccaggtccca
gtggtagagggctctggggagcaggacttcacctttgacgtgtccggggagaacgcagcc
ggggccgcggtggaacctggctcacggaacggggccccaggggatcctgaggccacaggg
gctacgggggcctcgcagggcctcctggaccggaaggaagtgctgggaggggtcattgct
ggaggcctcgtggggctcatctttgccgtgtgcctggtgggtttcatgctgtaccggatg
aagaagaaggacgagggcagctactccttggaggagccaaagcaagccaatggcggggcc
taccagaagcccactaagcaggaggagttctacgcctga
DBGET
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