Cervus canadensis (wapiti): 122442081
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Entry
122442081 CDS
T07554
Symbol
TAF1B
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccad03021
]
122442081 (TAF1B)
Transcription machinery [BR:
ccad03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
122442081 (TAF1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Zn_ribbon_RRN7
Rrn7_cyclin_N
DUF2031
DUF4661
Motif
Other DBs
NCBI-GeneID:
122442081
NCBI-ProteinID:
XP_043325309
LinkDB
All DBs
Position
5:complement(83045135..83097458)
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AA seq
689 aa
AA seq
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MISGRDAGLAELPPAARGGFPEAVGDGNPQSRVWVSARRALPAAPGSCARCPGNGSRRLK
RLSCTYGSGGGGEKSGCRATRRRGGRAVRLRRRRRRTPAGCGGALREFRERCSQCAAVSW
GLTDEGKYYCTSCHNVTERSREVIDTGAIPNTKIQAINRGLKRKRKLEKGWDWYVCEGFQ
HILYQQAEALQSLGVGPELKNEVLHNFWKRYLQKSKQAYCKNPVYPSRRKSTVLEDNSSH
SDWESEPELLSDVSRLSFGESGAESQPDVRTPKPFPIIKASHSETTSVCSGSLDGVEYSL
RKEKGVMKMSVPRTLAFCYLSLLWQRETITLSDLLRFVEEEHIPYIHAFQHFPEEMKLYG
RDKGIFAIESWPNYEVIFKKIIEVATFLDLPRFPDITENCYLHPNILCMKYLMEVNLPDE
MHNLTCLVVKATGIGEVDFLRFDPIAKKAKTVKYDVQAVAVIVVALKLLFLLDDNLEWSL
SNIAEKYNEKNKEDKPWFDFRKWYQVMKKAIDEKKQKWEEARAKFLWKGEKPLYYSAIDR
PVVYKRREMVVSLQKQFSTLVDSAPNIEKKKPSSFQFNWTEEDSERPCFHGHSLQGVLQQ
KGQSLTTKNSLYWLSTQKFCKSHCKHVTTYEESNFSLSYQFILNLFSFLLRIKTSFLHEE
VSLIEKRLFKAKYNKTNKKSSRSRKARKY
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgatttctgggagggatgccggattagcggagcttcctcccgcagctcgcggaggcttc
cctgaggctgtaggagacggaaatccacagtcaagagtctgggtttccgcccggagggct
cttcctgccgctcccggaagctgcgctcgctgcccgggtaacgggtcccggcggctgaag
cggctgagttgcacatatggatctggaggaggcggtgagaagtccggctgccgcgcgacc
aggcgacggggcgggagggccgtgaggctgaggagaaggcgccggaggacgccagctggc
tgtggaggcgctctgagagagttcagagagcgctgttctcagtgtgctgctgtttcttgg
ggtcttactgatgaaggcaaatattattgcacttcttgccacaatgttacagaaagatct
agggaagtcatagacactggggctattcctaatactaaaatacaagccatcaaccgggga
cttaaaagaaaacgaaaacttgagaaaggctgggattggtatgtgtgtgaaggttttcag
cacatactttatcaacaagcagaagccttacagagccttggagtaggcccagagttaaag
aatgaagttttgcataatttttggaagcgctaccttcagaagagcaagcaggcatattgt
aaaaacccagtttatcccagcagaaggaaaagtacggtattagaagataattcgagccat
tcagactgggagagtgagcctgagctgctgagtgacgtgagtcgactgtcttttggtgag
agtggagcagagtctcagcctgatgtccgcactccaaagcctttccccatcatcaaagca
tcacactcagaaacgacctctgtctgttccgggtctcttgatggagtagaatattccctg
cggaaggagaagggggtcatgaagatgagcgtaccacggacgctagccttctgctatctg
tcgttactttggcagagagagacaattactctttcagatcttttgagatttgttgaagag
gaacatattccttacatacatgcttttcagcattttccagaagagatgaaattatatgga
cgtgacaaaggaatctttgccatagagtcttggcctaactatgaagttatctttaaaaaa
ataattgaagttgccacatttttagatttgccgcgttttccagacataactgaaaactgc
tatcttcatccaaacatcttgtgtatgaaatacttgatggaggtcaatctccctgatgaa
atgcataatttaacctgcctagtggtaaaagcgactggaataggagaagtggattttcta
agatttgatcctatagctaaaaaggcaaaaactgttaaatatgatgtgcaagctgtagct
gtcattgtagtggcattgaaactgctctttttattagatgacaatttagaatggtctttg
tctaatattgcagagaaatataatgaaaagaacaaagaagataaaccatggtttgatttc
agaaaatggtaccaagttatgaagaaagctattgatgagaaaaaacaaaagtgggaggaa
gccagggcaaagtttctgtggaaaggtgaaaagccactctactactcagccattgacagg
ccagtggtgtataaaagaagagaaatggtggtgagtctacagaaacagtttagcacactg
gtggattcagcaccaaacattgaaaaaaaaaagccttcaagttttcagttcaactggact
gaagaggacagcgagaggccttgtttccatggtcatagcctccagggagtcctgcagcag
aaaggccagtccctgacaaccaagaattccctctactggctgagtactcagaagttctgt
aaaagccattgtaagcatgtgacaacctatgaagaatccaatttttctctgagttaccag
tttatactaaatctcttctccttcttgctgagaataaagacttcctttctccatgaagaa
gtgagcttaatagaaaagagactttttaaagcaaaatataataaaacaaacaagaaatct
tcaagatccaggaaagcaagaaaatactga
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