Cervus canadensis (wapiti): 122442224
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Entry
122442224 CDS
T07554
Symbol
SPTAN1
Name
(RefSeq) spectrin alpha chain, non-erythrocytic 1 isoform X1
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04210
Apoptosis
ccad04517
IgSF CAM signaling
ccad04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
122442224 (SPTAN1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
122442224 (SPTAN1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
122442224 (SPTAN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccad04812
]
122442224 (SPTAN1)
Cytoskeleton proteins [BR:
ccad04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
122442224 (SPTAN1)
Intermediate filaments
Intermediate filament-binding proteins
122442224 (SPTAN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
EF-hand_1
EF-hand_7
EF-hand_6
SH3_9
EF-hand_8
SH3_2
EF-hand_5
SH3_3
EF-hand_FSTL1
SH3_10
SCO1-SenC
Tetrabrachion
Spectrin_3
Motif
Other DBs
NCBI-GeneID:
122442224
NCBI-ProteinID:
XP_043325668
LinkDB
All DBs
Position
5:94156114..94215600
Genome browser
AA seq
2510 aa
AA seq
DB search
MLSSFRKRRVQKMDPSGVKVLETAEDIQERRQQVLDRYHRFKELSTLRRQKLEDSYRFQF
FQRDAEELEKWIQEKLQIASDENYKDPTNLQGKLQKHQAFEAEVQANSGAIVKLDETGNL
MISEGHFASETIRTRLMELHRQWELLLEKMREKGIKLLQAQKLVQYLRECEDVMDWINDK
EAIVTSEELGQDLEHVEVLQKKFEEFQTDMAAHEERVNEVNQFAAKLIQEQHPEEELIKT
KQDEVNAAWQRLKGLALQRQGKLFGAAEVQRFNRDVDETISWIKEKEQLMASDDFGRDLA
SVQALLRKHEGLERDLAALEDKVKALCAEADRLQQSHPLSATQIQVKREELITNWEQIRT
LAAERHARLNDSYRLQRFLADFRDLTSWVTEMKALINADELANDVAGAEALLDRHQEHKG
EIDAHEDSFKSADESGQALLAAGHYASDEVREKLTILSEERAALLELWELRRQQYEQCMD
LQLFYRDTEQVDNWMSKQEAFLLNEDLGDSLDSVEALLKKHEDFEKSLSAQEEKITALDE
FATKLIQNNHYAMEDVATRRDALLSRRNALHERAMYRRAQLADSFHLQQFFRDSDELKSW
VNEKMKTATDEAYKDPSNLQGKVQKHQAFEAELSANQSRIDALEKAGQKLIDVDHYAKDE
VAARMNEVISLWKKLLEATELKGIKLREANQQQQFNRNVEDIELWLYEVEGHLASDDYGK
DLTNVQNLQKKHALLEADVAAHQDRIDGITIQARQFQDAGHFDAENIKKKQEALVARYEA
LKEPMVARKQKLADSLRLQQLFRDVEDEETWIREKEPIAASTNRGKDLIGVQNLLKKHQA
LQAEIAGHEPRIKAVTQKGNAMVEEGHFAAEDVKAKLHELNQKWESLKSKASQRRQDLED
SLQAQQYFADANEAESWMREKEPIVGSTDYGKDEDSAEALLKKHEALMSDLSAYGSSIQA
LREQAQSCRQQVAPMDDETGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVE
VNDRQGFVPAAYVKKLDPAQSASRENLLEEQGSIALRQEQIDNQTRVTKEAGSVSLRMKQ
VEELYHSLLELGEKRKGMLEKSCKKFMLFREANELQQWINEKEAALTSEEVGADLEQVEV
LQKKFDDFQKDLKANESRLKDINKVAEDLESEGLMAEEVQAVQQQEVYGAMPRDESDSKT
ASPWKSARLMVHTVATFNSIKELNERWRSLQQLAEERSQLLGSAHEVQRFHRDADETKEW
IEEKNQALNTDNYGHDLASVQALQRKHEGFERDLAALGDKVNSLGETAERLIQSHPESAE
DLQEKCTELNQAWSSLGKRADQRKAKLGDSHDLQRFLSDFRDLMSWINGIRGLVSSDELA
KDVTGAEALLERHQEHRTEIDARAGTFQAFEQFGQQLLAHGHYASPEIKEKLDVLDQERA
DLEKAWVQRRMMLDQCLELQLFHRDCEQAENWMAAREAFLNTEDKGDSLDSVEALIKKHE
DFDKAINVQEEKIAALQSFADQLIAGGHYAKGDISSRRNEVLDRWRRLKAQMIEKRSKLG
ESQTLQQFSRDVDEIEAWISEKLQTASDESYKDPTNIQLSKLLSKHQKHQAFEAELHANA
DRIRGVIDMGNSLIDRGACAGSEDAVKARLAALADQWQFLVQKSAEKSQKLKEANKQQNF
NTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQADS
LMTSSAFDTSQVKDKRDTINGRFQKIKSMAASRRARLNESHRLHQFFRDMDDEESWIKEK
KLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKEEIQQ
RLAQFVEHWKELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTLVASEDYGDTLA
AIQGLLKKHEAFETDFTVHKDRVNDVCTNGQDLVKKNNHHEENISSKMKGLNGKVSDLEK
AASQRKAKLDENSAFLQFNWKADVVESWIGEKENSLKTDDYGRDLSSVQTLLTKQETFDA
GLQAFQQEGIANITALKDQLLAAKHIQSKAIEARHAALMKRWSQLLANSATRKKKLLEAQ
SHFRKVEDLFLTFAKKASAFNSWFENAEEDLTDPVRCNSLEEIKALREAHDAFRSSLSSA
QADFNQLAELDRQIKSFRVASNPYTWFTMEALEETWRNLQKIIKERELELQKEQRRQEEN
DKLRQEFAQHANAFHQWIQETRTYLLDGIAYRRVIRVYQYEVGDDLSGRSCMVEESGTLE
SQLEATKRKHQEIRAMRSQLKKIEDLGAAMEEALILDNKYTEHSTVGLAQQWDQLDQLGM
RMQHNLEQQIQARNTTGVTEEALKEFSMMFKHFDKDKSGRLNHQEFKSCLRSLGYDLPMV
EEGEPDPEFEAILDTVDPNRDGHVSLQEYMAFMISRETENVKSSEEIESAFRALSSEGKP
YVTKEELYQNLTREQADYCVSHMKPYVDGKGRELPTAFDYVEFTRSLFVN
NT seq
7533 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcatcgtttcgtaaacgcagagtccagaaaatggacccaagcggggtcaaagtg
ctggagacagccgaggacatccaggagaggcggcagcaggtcctggacagataccaccgc
ttcaaggagctctcgaccctgaggcgccagaagcttgaagactcctaccgattccagttt
ttccaaagagatgctgaggagctggagaaatggattcaggagaagcttcagattgcctcg
gatgagaattataaagacccaaccaacctgcagggcaagctgcagaagcatcaagccttt
gaagccgaggtgcaggccaactcaggtgccatcgtgaagctggatgagaccggtaacctg
atgatctcagaagggcacttcgcgtccgaaaccatccggactcgtctgatggagctgcac
cgccagtgggagttgcttctggagaagatgcgggagaaaggcatcaagctgctgcaggcc
cagaagctggtgcagtacctacgggagtgtgaggacgtgatggactggatcaacgacaag
gaagccattgtgacgtctgaggagctgggccaggacctggagcacgtggaggtgttacag
aagaaatttgaagagtttcagacagacatggctgcccacgaagagagagtcaatgaagtg
aaccagttcgctgccaagctgattcaggagcagcaccctgaggaggagctgatcaagaca
aagcaggatgaggtgaatgcggcctggcagcggctgaagggcctggccctccagcggcag
gggaagctgttcggggcagctgaggtccagcgctttaacagggatgtggatgagaccatc
agctggattaaggagaaggaacagctaatggcctctgatgactttggccgggacctggcc
agcgtccaggctctgctgcggaaacatgagggtttggagagagatcttgctgccttggag
gacaaggtcaaagccctgtgtgctgaggccgaccgcctgcagcagtcccaccctctgagc
gccacccagatccaggtgaagcgagaggagctgatcaccaactgggagcagatccgcacg
ctggccgcagagagacacgcgcgtctcaacgattcctacaggcttcagcgcttccttgcc
gacttccgagacctcaccagctgggtcactgagatgaaagccctcatcaatgcagatgaa
cttgccaacgatgtggccggagccgaagccctgctggataggcatcaggagcacaagggt
gaaattgacgctcatgaagatagctttaaatctgcagacgagtctggacaggccctgctt
gcagctggtcactacgcctcagatgaagtgagggagaagctgaccatcctctccgaggag
cgggccgcgctgctggagctctgggagctgcgacggcagcagtacgagcagtgcatggac
ctgcagctcttctaccgcgacacggagcaggtggacaactggatgagcaagcaggaggcg
ttcctgttgaatgaagacctgggcgattccttggatagtgtggaagcgcttctcaagaag
cacgaggactttgagaagtccctcagcgcccaggaggagaagatcacagccttagatgag
tttgccaccaagctgattcagaacaaccactacgcgatggaagatgtggccacccggcga
gacgcgctactgagccgccgcaacgccctgcatgagagagccatgtaccgccgtgcccag
ctcgcagattctttccacctgcagcagtttttccgtgactctgatgagctcaagagttgg
gtcaacgagaagatgaaaaccgccacagatgaagcttataaagacccatccaacctacaa
ggaaaagtgcagaagcaccaggcctttgaggccgagctctcggcaaaccagagccgcatt
gatgccctggagaaagccgggcagaagctgatcgacgttgaccactatgccaaggatgag
gtggcggctcggatgaatgaggtcatcagtctgtggaagaagctgctggaggccacagag
ctgaaaggcataaagctccgtgaggctaaccagcagcagcagtttaaccgcaacgttgag
gacatcgagctgtggctgtacgaagtggaaggtcatctggcctcggacgactacggcaaa
gacctcaccaacgtccagaacctccagaagaagcatgccctgctggaggctgacgtggca
gcgcaccaggatcgcatcgatggcatcacaatccaggcccgtcagttccaggacgcaggc
cactttgacgctgaaaacatcaagaagaagcaggaggccctggtagcccgctacgaggca
ctcaaggagcccatggttgcccgaaagcagaagttggctgattccctacggttgcagcag
ctcttccgtgacgttgaggatgaagagacgtggattcgggagaaagaacctattgccgcc
tccaccaacagaggcaaagatttaattggagtccagaacctgctaaagaaacaccaagcc
ctacaagcagaaattgctggccatgagccccgcatcaaagcagtcacacagaaggggaac
gccatggtggaggagggccattttgccgccgaggacgtgaaggccaagctccatgagctg
aaccagaagtgggagtcgctgaagtccaaggcctcccagcggcggcaggacctggaggac
tcgctgcaggcccagcagtattttgccgacgccaacgaggccgagtcctggatgcgggag
aaggaacccatcgtgggcagcaccgactatggcaaagatgaggactcggccgaggctctg
ctaaagaagcacgaggctttgatgtcggatctcagcgcctatggcagcagcatccaggcc
ctgcgagagcaggcccagtcgtgccggcaacaagtggcccccatggatgacgagactggg
aaggagctggtcttggcgctctatgactatcaggagaagagtccccgagaggtcaccatg
aagaaaggagacattctcaccttactcaacagcaccaataaggactggtggaaagtggaa
gtgaacgaccggcagggctttgtgccggctgcctacgtgaagaagctggaccctgcgcag
tcggcctccagggagaacctcctagaggagcagggcagcatcgcactgcggcaggagcag
atcgacaaccagacgcgggtaactaaggaggccggcagcgtgtctctgcgtatgaaacag
gtggaagaactgtaccattctctgctggaactgggagagaagcgtaaaggcatgttggag
aagagctgtaagaagttcatgttgttccgtgaagcgaatgagctacagcagtggatcaat
gagaaagaagcggccctgacaagtgaggaggtcggtgcggacttggagcaggttgaagtg
ctgcagaagaagtttgacgacttccagaaggatctcaaggccaatgagtcacggctgaag
gacattaacaaggtggctgaagacctggagtcggaaggtctgatggcggaggaggtgcag
gccgtgcagcagcaggaggtgtatggcgcgatgcccagggatgaatctgattctaagaca
gcctccccatggaagtctgctcgcctgatggttcacaccgtggccacctttaattccatc
aaggagctcaatgagcgctggcggtccctgcagcagctggctgaggagcggagccaactc
ctgggcagcgcccatgaagtgcagaggttccacagagatgctgatgaaaccaaagagtgg
atcgaagagaagaaccaagctctaaacacagacaactatggccatgacctggccagtgtc
caggccctgcagcgcaagcacgagggcttcgagagagaccttgcggcccttggcgacaag
gtgaactcgctcggggagacagccgagcgtctgatccagtcccaccccgagtccgcagag
gacctgcaggagaagtgcaccgagctgaaccaggcatggagcagccttggcaagcgtgcc
gaccagcgcaaggccaagctgggggactcccacgacctgcagcgcttcctcagcgacttc
cgggacctcatgtcttggatcaatggcatccgaggtctggtgtcctcagacgagctagcc
aaggatgtcaccggagctgaggccctgctggagcgacaccaggaacaccgcacagaaatt
gatgccagagctggcactttccaggcatttgagcagtttgggcagcagctgttggctcat
gggcactacgccagccccgagatcaaagaaaagctcgatgttctagaccaggagcgcgca
gacctggagaaggcctgggtccagcgcaggatgatgctggatcagtgccttgaattgcag
ctgttccatcgggactgcgagcaggccgagaactggatggctgcccgggaggccttcctg
aacacagaagacaaaggggactcgctagacagcgtggaggctctgatcaaaaaacatgag
gactttgacaaagcaattaatgttcaggaggagaagattgccgccctgcagtcctttgct
gatcagctcatcgctggcggccactacgccaaaggcgacatctccagccggcgcaatgag
gttctggacaggtggcgccgtctaaaagctcagatgattgagaagaggtcaaagctggga
gaatcgcagaccctccagcagttcagtcgggatgtggacgagattgaagcttggatcagt
gaaaaattacagaccgcaagtgatgagtcatacaaggaccccaccaacatccagctttcc
aagctgctgagcaagcatcagaagcaccaggccttcgaagcagaactgcacgccaatgcg
gaccggatccgcggggttatcgacatgggcaactccctcattgatcgcggggcctgcgca
ggcagcgaggatgccgtcaaggcccggctggccgctttagctgaccaatggcagttcctg
gttcagaagtcggctgagaagagccagaagctgaaagaagccaacaagcagcagaacttc
aacactggcatcaaggacttcgacttctggctctctgaggtggaagccctgctggcctct
gaggattatggcaaagacctggcttctgtgaacaacttgctaaaaaaacatcaactgctg
gaggcagatatctctgcccatgaggatcgcctgaaggacctgaacagccaggcggacagc
ctgatgaccagcagcgccttcgacacctcccaagtgaaggacaagcgggacaccatcaat
ggccgtttccagaagatcaagagcatggctgcctcacggcgagccaggctgaatgagtcc
caccgcctgcaccaattcttccgggacatggacgatgaggagtcctggatcaaggagaag
aagctgctggtgagttcggaggactacggccgcgacctgacgggcgtccagaacctaagg
aagaagcacaaacggctggaggcagagctggctgcccacgagccggccattcagggtgtc
ctggacactggaaagaagctgtccgatgacaacaccatcgggaaggaggagattcagcag
cgcctggcacagttcgtggagcactggaaggagctgaagcagctggcggccgcccggggc
cagcgactagaagaatccttggaatatcagcagtttgtagccaacgtggaggaggaggaa
gcctggatcaatgagaagatgaccctggtggccagtgaagattacggagacactcttgct
gccatccagggcttactgaagaaacacgaagccttcgagacggacttcactgtccacaag
gaccgggtgaatgacgtctgcactaatggacaagacctggttaagaagaacaatcaccac
gaagagaacatctcgtcaaagatgaagggtttgaacgggaaagtgtcagacttggagaag
gctgcctcccagaggaaggcaaagctcgacgagaactctgccttcctccagttcaactgg
aaggccgacgtggtggagtcctggatcggtgaaaaggagaacagcttgaagacagatgac
tatggtcgagatctgtcttctgtccaaactctcctcaccaaacaggaaacctttgatgct
ggcctgcaagccttccagcaggagggcatcgccaacatcactgccctcaaagatcagctg
ctggccgccaagcacattcagtccaaggccatcgaggcccgccacgccgccctcatgaag
aggtggagccagctcctggccaactcggccacccggaagaagaagctgctggaggcacag
agtcacttccgcaaggtggaggatctcttcctgacctttgccaaaaaggcttcagctttc
aatagctggtttgaaaacgcagaggaggacttaacagaccccgtgcgttgcaactccctg
gaagagatcaaggccttgagagaggcccacgacgccttccgctcctcgctgagctcggcc
caggctgacttcaaccagctggccgagctggaccgccagatcaagagcttccgcgtggct
tccaacccctacacctggttcaccatggaggccctggaggagacctggaggaacctacag
aagatcatcaaggaaagggagctggagctgcagaaggagcagcggcggcaggaggagaac
gacaagctgcgccaggagttcgcacagcatgccaacgccttccaccagtggatccaggag
accagaacgtatctcctcgatggcatagcgtatcgtcgggtcattcgtgtctatcagtat
gaagttggggatgatctgtctggaaggtcctgcatggtggaagaatccgggaccctcgaa
tcgcagcttgaagctaccaaacgcaaacaccaggagattcgagccatgagaagtcagctc
aagaagattgaagacctgggggcggccatggaggaagcgctgatcctggacaacaagtac
acggagcacagcaccgtgggcctggcccagcagtgggaccagctcgaccagctgggcatg
cgcatgcagcacaacctggagcagcagatccaggccaggaacacgacaggagtgaccgag
gaggccctcaaagaattcagcatgatgttcaaacactttgacaaggacaagtccggccgg
ctgaaccaccaggagttcaaatcctgcctgcgctccctgggctatgacctgcccatggtg
gaggaaggggagcccgaccccgagttcgaggccatcctggacactgtggatccgaacagg
gatggccacgtctccctgcaagagtacatggccttcatgatcagccgtgagactgagaac
gtcaagtccagcgaggagattgagagcgccttccgggccctgagctccgaagggaagcct
tacgtgaccaaggaggagctgtaccagaacctgactcgggaacaagccgactactgcgtc
tcccacatgaagccctatgtggacggcaagggccgcgaactccccactgctttcgactac
gtcgagttcacccgctcgctcttcgtgaactga
DBGET
integrated database retrieval system
