Cervus canadensis (wapiti): 122442237 Help Entry 122442237         CDS       T07554                                  Symbol NUP188 Name (RefSeq) nucleoporin NUP188 isoform X1   KO K14311   nuclear pore complex protein Nup188 Organism ccad  Cervus canadensis (wapiti) Pathway ccad03013   Nucleocytoplasmic transport ccad05014   Amyotrophic lateral sclerosis Brite KEGG Orthology (KO) [BR:ccad00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     122442237 (NUP188)  09160 Human Diseases   09164 Neurodegenerative disease    05014 Amyotrophic lateral sclerosis     122442237 (NUP188)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ccad03019]     122442237 (NUP188) Messenger RNA biogenesis [BR:ccad03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Nuclear pore complex      122442237 (NUP188) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Nup188_N-subdom_III Nup188_N Nup188_SH3-like HEAT_SCC3-SA DUF4912 Gar1 Motif Other DBs NCBI-GeneID:  122442237 NCBI-ProteinID:  XP_043325704 LinkDB All DBs Position 5:94448750..94490873 Genome browser AA seq 1752 aa AA seqDB search MAAAAGGPCVRSSRELWTILLGRSALRELNQIEAELNKHWQRLLEGLSYYKSPSPSSAEK VKASKDVASPLKELGLRISKFLGLDEEQSVQLLQCFLQEDYRGTRDSLKTVLQDERQSQA LILKIADYYYEERTCILRCVLHLLTYFQDERHPYRVEYADCVDKLEKELVTKYRQQFEEL YKTEAPTWETHGNLMTERQVSRWFVQCLREQSMLLEIIFLYYAYFEMAPSDLLVLTKMFK EQGFGSRQTNRHLVDETMDPFVDRIGYFSALILVEGMDIESLHKCALDDRRELHQFAQDG LICQDMDRLMLTFGDIPHHAPVLLAWALLRHTLNPEETSSVVRKIGGTAIQLNVFQYLTR LLRSLASGGNDCTTSTACMCVYGLLSFVLTSLELHTLGNQQDVIDTACEVLADPSLPELF WGTEPTSGLGIILDSVCGMFPHLLSPLLQLLRALVSGKSTAKKVYSFLDKMSFYNELYKH KPHDVISHEDGTLWRRQTSKLLYPLGGQTNLRIPQGTVGQVVLDDRAYLVRWEYSYSSWT LFTCEIEMLLHVVSTADVIQHCQRVKPIIDLVHKVISTDLSIADCLLPITSRIYMLLQRL TTVISPPVDVIASCVNCLTVLAARNPAKVWTDLLHTGFLPFVAHQVSNMSQMISAEGMNA GGYGNLLMNSEQPQGEYGVTIAFLRLITTLVKGQLGSTQSQGLVPCVMFVLKEMLPSYHK WRYNSHGVREQIGCLILELIHSILNLCHETDLHSSHTPSLQSLCICSLAYTEAGQTVINI MGIGVDTIDMVMAAQPRSDGAEGQGQGQLLIKTVKLAFSVTNNVIRLKPPSNVVSPLEQA LTQHGAHGNNLIAVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGSDAAAIRDA FLTRLQSKIEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDGSDGSKEFSLGVWSCLH AVLELISSQQQDRYWCPPLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTSPLFGT LSPPSETSEPSILETCALIMKIICLEIYYVVKGSLDQSLKDTLKKFSSEKRFAYWSGYVK SLAAHMADTEGSSCTSLVECQMLVSAWRMFLIIATSHAEITHLTDSAVRRQLFLDVLEGT KALLLVPASVNCLRLGSMMCTLLLILLRQWKRELGSVDEILGPLTEILEGVLQADQQLME KTKAKVFSAFITVLQMKEMRVNDIPQYSQLVLNVCETLQEEVIALFDQTRHSLAAGSATE DKDSMETDDCSRLRHKDQRDGQVCVLGLHLAKELCEVDEDGDSWLQVTRRLPILPTLFTT LEVSLRVKQNLHFTEAALHLLLTLARTQQGATAVAGAGITQSICLPLLSVYQLSSNGTVQ TPGASRKSLDAPSWPGVYRLSMSLMERLLKTLRYNFLTEALDFVGVHQERTLQCLNAVRT VQSLACLEEADHTVGFLLQLSSFRKEWHFHLPQLMRDVQVNLGYLCQACTSLLHSRKMLQ HYLQNKNGEGIPSAVGPRAQRPPTAAPAALSCSSSKQPAPDTEASEQRALRTVQYGLLRI LSRTLAALRRFTPDVCQVLLDQSLDLAEYSFLFALSFTTPTFDSEGAPSFGTLLATVNVA LNMLGELDKKKEPLTQAVGLSTQVEGTRTLKSLLMFTMENCFYLLISQAMRYLRDPAVHP RDKQRMKQELSSELSTLLSSLSRYFRRGAPSSPAAGVLPSPQGKSTSLSKVSPESQEPLI QLVQAFVRHVQR NT seq 5259 nt NT seq  +upstreamnt  +downstreamnt atggcggctgccgctggcggtccgtgtgtgaggagcagtagagaactgtggacaattctg ctaggaaggtcagctctgagagaactgaatcagattgaggcagagctgaataaacattgg cagcggctgttagaaggactttcttactacaaatctcccagtccaagttcagctgaaaaa gtgaaagctagtaaagatgtagcttcaccactgaaggaactgggtttaagaatcagcaag tttttgggtcttgatgaagaacagagtgtgcagttactccagtgtttccttcaggaggac tacagaggtactcgggactcactaaagacggtgctgcaagatgagaggcagagccaggcc ttaattctgaagattgcagattattactatgaagaaagaacctgtattcttcgttgtgtc ttacaccttctcacttatttccaagatgaaagacatccctatagggttgaatatgccgac tgtgtggataaattggaaaaggagctagttacaaaatatagacagcagtttgaagagctt tataaaactgaagcaccaacttgggagacacatggaaacctcatgactgagcgccaggtg tctcgctggtttgttcagtgccttcgggagcagtccatgctgctagaaattattttcctg tattatgcatactttgagatggcgcctagtgacctattggtgttaaccaagatgtttaaa gagcaaggatttggtagtaggcagactaacaggcacctggtagatgagaccatggatcct tttgtggatcggattggatacttcagtgcccttatcctggtggaaggcatggatattgaa tccttgcataagtgtgctttggatgacagaagagaactgcaccagtttgcccaggatgga cttatttgtcaggatatggaccgtttgatgttgacctttggggacattccgcatcatgcc ccagtgcttttggcatgggccctcctccgtcacaccctgaatccagaagagacaagcagt gtggtccggaagataggggggacagccatccaactgaatgtctttcagtacttgacccga ctgctccgctcactggccagtgggggaaatgactgtaccaccagtactgcgtgcatgtgt gtctatggactcctttcttttgtcctgacctcactggagctgcacaccctaggcaatcag caggatgtaattgacacagcatgtgaagtcctggcagacccttctctcccagaactgttc tggggaacagaaccaacctctggtcttgggatcattctggacagtgtatgtggaatgttt ccccatctcctttcccctctcctgcaactgcttcgagcccttgtatcagggaaatcgact gctaagaaggtatatagtttcttggataagatgtctttctacaatgaactctataaacac aaaccccatgatgtgatctcccatgaagatggaactctttggcggaggcaaacatccaaa ctcctttaccctctagggggtcagaccaaccttcgcatacctcagggcactgtgggccaa gtggtgctggacgacagggcctacctggtgcgctgggagtactcctacagcagctggacc ctcttcacgtgcgagattgagatgctgctgcatgtcgtctccaccgcagatgtgattcag cattgccagcgggtcaaacccatcatcgacctcgtccataaggtcatcagtacagacctg tcaatagcagactgcctcctgcccatcacgtcccgcatctacatgctgctgcaaaggtta acgacagtgatctccccacctgtggatgtcattgcttcttgtgtcaattgcttgaccgtt ttggctgcccggaacccagcaaaggtctggactgatcttcttcacacaggcttcttgcct ttcgtggctcaccaggtctccaacatgagtcagatgatcagtgctgaggggatgaatgct ggtgggtatggaaacctcttgatgaatagtgaacagccccagggcgagtatggggtcact attgcctttctgcgcttgatcaccactcttgtcaaggggcagcttggtagtacccagagc caagggctggtgccttgtgtcatgtttgtgctgaaggagatgctgccaagttaccacaag tggcgctacaactcccatggtgtgagagaacagattggttgcctgatcctggagctgatt cattcaatactgaacctgtgccatgagacagacctgcacagcagtcacacccccagcctg cagtctctctgcatctgcagcttggcctacacggaagcaggacagacagtgatcaatatc atgggcatcggtgtggacaccatcgacatggtcatggctgctcagccccgcagcgatggg gcagagggccagggccagggccagctgctgatcaagacagtgaaactggcattctccgtc accaacaatgtcatccggctgaaaccgccttctaatgtggtgtcccctctggaacaggct ctcacacagcatggtgcccatgggaacaaccttattgctgttcttgccaaatacatctat cacaaacacgacccagctctgcctcgtcttgccatccagctgctaaaacgtctggccacg gtggcccccatgtcagtgtatgcctgcctgggcagtgatgcagctgccatccgagatgcc ttcctgacccgactgcagagcaagattgaggatatgcgcatcaaagtcatgattctggaa ttcctcacggttgccgtagagacgcagccaggcctcattgaactatttctgaatctggag gtgaaggatggcagtgatggctccaaggaattcagcctcggggtgtggagctgtctccac gcggtgctggagctgatcagttcccagcagcaggaccgctattggtgcccccccctgctg caccgggcggccatcgcctttttgcacgccctgtggcaggaccggcgggacagtgccatg ctggtcctcagaaccaaacccaagttttgggagaatctaacgagtccgctatttggtaca ctttctcctccctcggaaacatctgagcccagcatcctggaaacctgtgccctaatcatg aagataatttgcttggagatatactatgtagttaagggctcattagaccagtcattaaaa gatacactcaagaaattttccagcgagaagcgctttgcctactggtcggggtacgtcaag tccttggcagctcacatggccgacaccgagggcagcagctgcacctccctggtggagtgt cagatgctggtctccgcctggaggatgtttctcatcatcgccaccagtcacgcggagata acgcacctgacggactctgcagtgcgtcgccagctctttcttgacgtgctcgaggggacc aaggcgttactccttgtccctgcctccgtgaactgcctccgcctcggctccatgatgtgc accctgctgcttattctcctccggcagtggaagagagagttagggtctgtggatgaaatt ctcgggcccctgacggagatcctggagggagtgctgcaggcagaccagcagctcatggag aagaccaaggccaaggtgttctcggcgttcatcacggtgctgcagatgaaggagatgaga gtgaatgacatcccccagtactcccagctggtgctgaacgtctgcgagacccttcaggaa gaggtgatcgcactttttgaccagacccgccacagcctggcggcgggcagtgccaccgag gacaaggacagcatggagactgacgactgctcccggctccggcataaggaccagcgggat gggcaggtctgtgtcctgggcctgcacctggccaaggagttgtgtgaggtggatgaggac ggggactcgtggctgcaggtgacccgccggctccccatcctgccgaccctcttcaccacc ctggaggtgagccttcgcgtgaagcagaacctgcacttcaccgaggcagcgctgcatctg ctcctcaccctggcccgcacccagcagggggccacggccgtggctggagctggcatcacc cagagcatttgtttgcctctcctgagtgtgtaccagctcagcagcaacgggacagtgcag acgcccggcgcctcgcggaagtcgctggacgccccctcttggcctggtgtctaccgtctc tccatgtccctgatggagcggctcctcaagaccctgcgctacaatttcctgactgaggcg ctggacttcgtgggggttcaccaggagcggaccttacagtgcctcaacgctgtgaggacg gtgcagagtctggcgtgcctggaggaggcggaccacactgtgggcttcctcctgcagctc tccagcttcaggaaggagtggcacttccacctgcctcagctcatgcgggatgtccaggtg aacctcggctacctgtgccaggcctgcacctccctcctgcacagccgcaagatgctgcag cactacctgcagaacaaaaatggggagggcatcccctcggccgtcggcccccgagctcag cggccacccacagctgccccggctgccctctcctgctcctcctccaagcagcccgctccc gacacagaggcctcggagcagcgggccttgcgcaccgtccagtacggcctcctgaggatc ctcagcaggaccctggccgccctgcgccgcttcacccccgatgtctgccaggtcctgctg gatcagtccctggaccttgctgaatacagcttcctgtttgccctgagcttcaccactccc acctttgactccgaaggggccccctctttcgggacccttctggccaccgtgaatgtggcc ctgaacatgcttggagagctggacaagaaaaaggagcctctcactcaggctgtggggctc agcacacaagtggaagggaccagaactctgaagtcgctcctgatgttcaccatggagaac tgcttctacctgctcatctcccaggcgatgcgttacctccgggacccggctgtgcacccc cgggacaagcagcggatgaagcaggagctcagctcagagttgagcactctcctctccagc ctctcccgctacttccgcaggggagcccccagctcccctgctgctggcgtccttccctcg ccgcagggcaagtccacctctctctccaaggtcagccctgagagtcaggagcctctgatc cagctggtgcaggcctttgtccgacacgtgcaaagatag

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