Cervus canadensis (wapiti): 122442296
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Entry
122442296 CDS
T07554
Symbol
TTF1
Name
(RefSeq) transcription termination factor 1 isoform X1
KO
K15225
transcription termination factor 1
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04918
Thyroid hormone synthesis
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09150 Organismal Systems
09152 Endocrine system
04918 Thyroid hormone synthesis
122442296 (TTF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccad03021
]
122442296 (TTF1)
Transcription machinery [BR:
ccad03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
122442296 (TTF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-bind_6
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
122442296
NCBI-ProteinID:
XP_043325864
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Position
5:complement(97398478..97427581)
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AA seq
766 aa
AA seq
DB search
MEGESSSLETQTPVFMKKKAKHSKHKDRHRRPSQESFRAAPLANEQCVITKRKKKRKDSQ
HLVSSPLKKSEICDETEMATSKPKKKKKRRKSALGVDRETGVACVLVDKENIENTPKNFR
SDVDVVYVDASKEQKSTERPEADDPRSVTKPRENTSEELHGEVRKKRKKKKKKKHKKRQR
EVESWDAVQESPGASSALPRAASQEQEPQPQVDQEGGLTQLSVSAGHSKSRKRKRKHPDP
PEFEALAAPERAESVYSEGSRVADEVETAGGSQDSSGLKKKSKKRKRRSLESTVAPGDFS
VPGRCSEDTPLDSLEGTLIEESAKPRPQEENPPACSRKVQRSEPTNEDKSNSAKESEAKY
LSEDSRDSEDPEVELESAVKQLQEFIPDIKDRAATTIKRMYRDDLGRFKEFKAQGVTIKF
GKFSVKENQQLERNVQEFLSLTGIENADKLLYTDRYPEEKSVITDLKRKYAFRVHIGKGI
ARPWKLVYYRAKKMFDVNNYKGRYSKGDTEKLKIYQSLHGNDWKKIGEMVSRSSLSVALK
FSQISGQINHGAWSKTETQKLIKAVEEVILKKMSPQELNEMDSKLQLNPEGRLSIVREKL
YKGISWVEVEARVETRNWMQCKSKWTEILTKRMTNGRDVYRGVNALQAKINLIERLYEIN
VQDVNEIDWEDLASIIGDVPPSYVQTKFYKLKATCVPFWQKKTFPEIIDYLYETSLPLLK
EKLEKMMEKKGTEIQAPAAPKPVFLFRDIFYYDDDDSEGEDRDEKS
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagaatcaagcagcttggaaacccaaactcccgttttcatgaagaaaaaggct
aagcattctaaacataaggacagacatcggcggccttcccaggagagtttcagagccgcc
ccgctggcaaacgagcagtgtgtcataacgaagcgtaaaaaaaagagaaaggacagccag
catctcgtttcttctcctctgaagaaatcagaaatctgcgatgagactgaaatggccaca
tctaaacccaaaaagaagaaaaagagaagaaaaagtgctttgggagtcgacagggaaaca
ggtgttgcatgcgtcctggtggataaagaaaatattgagaacacaccaaagaatttcaga
agcgatgtggatgtcgtttacgttgacgcaagcaaggagcagaagtcgacagaacggcct
gaggcagatgatccccgttcagttactaagccacgtgaaaacacgtccgaggaactgcat
ggtgaagttcggaagaagaggaagaagaagaagaagaagaagcataaaaaacgtcagagg
gaagttgaatcctgggatgctgtccaagaaagtccgggtgcaagcagcgccctgcccagg
gcagcctcccaggagcaggaaccgcagcctcaagtggaccaagaagggggactcacgcaa
ctctcagtgtctgcaggtcacagcaagtccaggaaaaggaagaggaagcatccagatccc
ccagaattcgaagccttggctgcgcccgagagggccgagagcgtgtactcggagggatcc
cgagtggctgatgaggtcgagactgcaggaggcagtcaggactccagcggcctcaagaaa
aagtctaagaaaaggaagcgaagatctcttgagagcaccgtggcgcctggtgatttttca
gtgcccgggaggtgctctgaggacacgcctcttgattcactggaaggtaccttgattgaa
gaaagtgcaaaacccaggccacaagaggagaatcccccggcctgttccagaaaggtgcag
aggtcagaacctacaaatgaagacaaaagcaattcggctaaagagtccgaagctaaatac
ttatctgaagattcgcgagattccgaagatccggaggtggagttggagtctgcggtgaag
cagctgcaggaattcatccccgacatcaaggacagggctgccaccacaatcaagcggatg
taccgagatgacctggggcggtttaaagaattcaaagcccagggtgtcactattaaattt
ggcaagttttccgtgaaggaaaatcagcagttggagaggaatgtgcaagaattcctatcc
ctgacaggaatcgagaacgcagataagctgctgtacacagacagatacccggaggagaag
tctgtgatcaccgacttaaagaggaagtacgcgttcagagtgcacattggtaaaggcatt
gcccggccctggaaactcgtatattatcgagcaaagaagatgttcgatgtcaataattac
aaaggcaggtacagcaaaggagataccgagaagttgaagatataccagtccctgcacggg
aacgactggaagaagattggtgagatggtgtctcgaagcagcctctccgtggccctgaag
ttctcccagatcagcggtcaaattaatcatggtgcctggagcaagacagaaacccagaaa
ttaatcaaggctgttgaagaagtgattctgaagaaaatgtctccccaggagctaaacgag
atggattctaaactgcagctgaatcctgaaggccgcctgtcaattgttcgggagaagctc
tacaaaggcatatcctgggtagaagtggaggctagagtggaaaccaggaattggatgcag
tgtaaaagtaagtggacggaaattctaaccaagaggatgacgaacggtcgggacgtgtac
cgtggagtgaatgctctgcaggccaagatcaatctgatcgaaaggttgtacgaaataaat
gtgcaagatgttaatgaaatagactgggaagatcttgctagcatcataggggatgttccc
ccgtcttacgtccaaactaaattttataaactgaaagctacctgcgtccccttctggcag
aagaagactttcccagagatcatagactacctttatgagacgagtctaccgctgcttaaa
gagaagttggagaagatgatggagaaaaaggggactgagatccaggctccagcagcccct
aagcccgtcttcctgtttcgagacatcttttattatgatgatgacgacagtgagggagaa
gacagagatgaaaaaagttaa
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