Cervus canadensis (wapiti): 122442329
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Entry
122442329 CDS
T07554
Symbol
SNAPC4
Name
(RefSeq) snRNA-activating protein complex subunit 4 isoform X1
KO
K09453
snRNA-activating protein complex subunit 4
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccad03000
]
122442329 (SNAPC4)
03021 Transcription machinery [BR:
ccad03021
]
122442329 (SNAPC4)
Transcription factors [BR:
ccad03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
122442329 (SNAPC4)
Transcription machinery [BR:
ccad03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
122442329 (SNAPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_Hrp3
Motif
Other DBs
NCBI-GeneID:
122442329
NCBI-ProteinID:
XP_043325969
LinkDB
All DBs
Position
5:complement(98747845..98770600)
Genome browser
AA seq
1396 aa
AA seq
DB search
MDVDAERERISREIQQLERILDPCCSSLSMDVSESSLDSDSDADSLPDEDSDSDVAGPLL
SEEERWGEASNDEDDPKEKALPEDPETCLQLNMVYQEVVREKLAEVSLLLAQNREQQEEI
MGDLAGVKGPKVKDGRSPPPNLYLGHFMKPYFRDRVTGVGPPANEDTREKAAQGIKAFEE
LLVTKWKTWEKVLLRKSVVSDRLQRLLQPKLLKLEYLQQKQSRAASELERRVLEKQAREA
EKEVQDINQLPEEALLGDRLDGHDWDKISNVNFEGGRSTQEIRKFWQNYEHPSINKQEWS
EQEVAQLKAVAAKHGHLDWQRIAEELGTRRSAFRRPPGWPANPCPALAPQTRRSAFQCLQ
QYQQHNPALKRKEWTEEEDRILTRLVQAMRVGSHIPYRRIVYYMEGRDSMQLIYRWTKSL
DPGLKKGLWAPEEDAKLLQAVAKYGEQDWFKIREEVPGRSDAQCRDRYLRRLHFSLKKGR
WNPKEVEKLIELIEKYGVGHWAKIASELPHRSGSQCLSKWKIMVRQRQRQARRRAPRRAR
WSPSSGSSSDGSWEDSEPEEAPEDAPEEDPAGSPEPLPAPYAVPDMDLWVPTRQSPEELW
GAGTGGCPCPPEGPNTATATAPAPAGQLASRGRSTNPRSIRCLCPAIARRWSSEGPPGEQ
ERPGSAPRPGPGGGSRDEARPRERPPWAGTVQQRQGHALQWRRLEHKLLAAVSPWVGEAG
LLCARPRPAVRPRRADGIRKQLQGAHLASTPVFALFIQLFQIDTPGCVEVVRERKAWPPA
LLQAGAWDPPPLQEPSSAHSAPGCLTQSVPAQGAAKQGTCPEVGKGMQACRAASTPPAPA
PAPCRPRPKPKTVSELLREKRLREARARRAAQGPAILPARVLVSSPVVFQPLAPPAAPVP
SAMLSSAMLSGPGGPPVTSFTASGSWAPAKDEQAPTLHAFALGPAASRAPGPVPASCPLS
ALGQSQVPATSRKQGLPEVPPFLPAAPSPVQLPVQSLRLTPALGTPAAASTSLPVTWVLT
AQGLLPVPLQAVMSLPTPTGAPDPTQLSVTLPPSPTETPASRGPGFPEQSHPGPPAASTD
SEPELPCRTEPLSESPAEVAEACGLAGLASPGEALAAGETSAPTTPSQETPLAHHPVTGP
PSSSPPPLHGAPGAASGPREPRPLDLEEPPLSWLGLENEALDLSLLSQESEAAAREWLQG
QRGVPAPAPGSRLAYQPPMLCSLRALSGLLLRKKDLEHGAAVLAPGGPAGALQASLGRVR
ERLRDSPAYLLLRARFLAAFALPALLATLSPRGVPTTLSVSTGPDPETDSDQLDPEEPEL
TDSDGDAGDPAQTRTWIQTREGVPGPLRTRRALGSLAGVDPSREPPGAAHPRHVGVTTAV
RLAAGSVAPHAPHSSA
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggatgctgagagagaaaggatatccagggagatccagcagctggagaggatc
ctggacccctgctgctcgagcctcagcatggacgtctcggagtccagtctcgactcggat
tcggatgcagattcgctgcccgacgaggactcggactcagacgtcgctggcccactgctc
tcggaggaagagaggtggggtgaggccagcaatgacgaggacgaccccaaggagaaggcg
ctccctgaagacccggagacctgcctgcagctgaacatggtctaccaggaggtggtccgg
gagaagctggcagaagtcagcctgctgctggcccagaaccgggagcagcaggaggaaatc
atgggcgacctcgcaggtgtcaagggccccaaggtgaaggatggcaggagcccgcccccg
aacctgtacctcggacacttcatgaagccctacttcagggacagggtcacgggagtgggt
cctcctgccaacgaggacacgcgggagaaggctgcccagggcatcaaggctttcgaggag
ctcctggtgaccaagtggaagacctgggaaaaggtcctgctcaggaagtcggtggtgagt
gaccgcctgcagcggctgctccagcccaagttgctcaagctggagtacttgcaacagaag
cagagcagggccgcgagcgagctggagaggcgggtcctggagaagcaggccagggaggcg
gagaaggaggtgcaggacatcaatcagctcccggaggaggccctgctaggtgacaggctg
gacggccatgactgggacaagatctccaacgtcaacttcgagggaggccgcagcacgcag
gagattcgcaagttctggcagaactatgagcacccgagcatcaacaagcaggagtggagc
gagcaggaggtggcccagctgaaggccgtcgcagccaagcacggccacctggactggcag
aggatcgccgaggagctggggacgcgccgcagcgccttccgccgtcccccggggtggccc
gctaacccctgccccgctctggccccgcagacgcgccgcagcgccttccagtgcctgcag
cagtaccagcagcacaacccggcgctgaagcgcaaggagtggacggaggaggaggaccgc
atactcacgcggctcgtgcaggccatgcgcgttggcagccacatcccctaccggaggatt
gtctactacatggaggggcgggactccatgcagctcatctaccgctggaccaagagcctg
gaccccggcctgaagaaggggctctgggccccagaggaggacgcgaagttgctacaagca
gttgccaagtatggggagcaggattggtttaaaatccgggaagaggtgccaggtaggagc
gatgcccagtgccgagatcgatatctcagaaggttacatttcagcttgaaaaagggacga
tggaatcctaaagaagtggagaagttaattgaattgatagaaaaatacggtgtcggtcac
tgggcaaaaatagcctctgaactaccccatcggtcaggctcccagtgcctgagcaaatgg
aagatcatggtcaggcagcggcagcggcaggcccggcggcgggcccctcgcagggcgcgc
tggagccccagcagcgggagcagcagtgacggcagctgggaggactcagagcccgaggag
gccccggaggacgccccggaggaggacccggcgggcagcccggagccgctgccagctccg
tacgccgtgccggacatggacctgtgggtgcccacccggcagagcccggaggagctgtgg
ggagcgggcactgggggctgcccatgccctcccgagggccccaacacggccacggccacg
gccccagcccccgcagggcagctggcctccagggggcggagcaccaacccaaggagcatc
aggtgcctgtgcccggccatcgctcgccgctggagctccgaggggccaccgggcgagcag
gagaggcctggctcagccccgcggcccggccctggcggcggcagcagggacgaggccagg
ccccgcgagcggccaccgtgggccgggaccgtgcagcagcgccagggacacgccctgcag
tggaggcgcctggagcacaagctgctggcggccgtgagcccgtgggtgggagaggccggc
ctgctgtgcgcgcgcccgaggcccgccgtgcggccgcgtcgagctgatggcatcaggaaa
cagctgcagggcgcccacttggccagcaccccagtgttcgccctcttcattcagctgttc
cagattgacacgcctggctgcgtggaggtggtccgagagaggaaggcctggccgcctgcc
ctgctccaggctggggcctgggacccgccgcccctgcaggaaccctcgagcgcccacagc
gccccaggctgcctcacccagagcgtgccggcccaaggggccgcgaagcagggcacctgt
cctgaggtgggcaaagggatgcaggcctgccgcgcagcgtccacgcccccagcgcccgcc
ccggccccgtgcagaccccggcccaagcccaagacggtgtctgagctgcttcgggagaag
cgtctgcgggaggcccgagccaggagggctgcgcagggccccgccatcctcccggcccgc
gtgctggtctcctcgcccgtggtcttccagccgctggcccccccagccgccccagtcccc
agcgccatgctgtccagcgccatgctgtccgggcctggaggccctccggtgaccagtttc
actgcttcgggctcctgggcaccagccaaggatgagcaagccccgactctgcatgccttt
gccctcggcccggctgcctccagggcccctggcccggttcctgcgagctgcccgctgagt
gctcttggacagtctcaggtccctgccacgtcccggaagcagggcctgcctgaagtgccc
ccctttctgcccgcggcccccagccccgttcagctgcctgtccagtctctcagactgacg
ccagccctgggcacgcccgcggcagccagcacctctctgcccgtcacctgggtcctcacg
gcacaggggctgctccctgtacccctgcaggccgtgatgagcctgccaacgccgacaggg
gctcctgaccccacacagctgtcggtgactctgccaccctcgcccactgagaccccagcc
agccggggtcccgggttccctgagcagagccaccctgggccgccagcagccagcacagac
tcggagccagagcttccctgcaggacggagcccttgagtgagagccccgcagaggtggcc
gaggcctgtggcctcgcaggactcgcctcccctggggaggccctggcggctggggagaca
tctgcacccacgactccctcccaggaaacacccctggcccaccacccggtgaccgggccc
cctagctccagcccaccacctctgcacggggccccaggggctgcctcagggccccgggag
ccccggcctctggacctggaggagcccccgctctcctggctggggctggagaacgaagcc
ctggacttgagcctcctttcccaggagagcgaggccgctgcgcgggagtggctgcaaggg
cagcgaggggtgcccgcgcccgccccggggagccggctggcctaccaaccgcccatgctg
tgcagcctgcgggcgctgtccggcctcctgctgcgcaagaaggacttggagcatggggcc
gcagtcctggcgcccggcgggccggccggcgccctgcaggcctcgctggggcgggtgcgc
gagcggctccgcgacagcccggcctacctgctgctgcgggcgcgcttcctggccgccttc
gccctgcccgcgctcctggccaccctgtccccccgcggcgtccccaccaccctgtcggtg
agcaccgggccggaccctgagacagacagtgaccagctcgacccggaggagccagagctc
actgacagtgacggggacgccggggaccccgcccagacaagaacctggatacagacacgg
gaaggagtccctggtcccctcagaacacggagggccctcgggtcccttgcaggcgttgac
ccttccagagaaccccccggagcagcccatccccgtcacgtgggggtgaccacagcagtg
aggcttgctgctggatctgtggccccccacgccccccacagctcggcctag
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integrated database retrieval system
