Cervus canadensis (wapiti): 122442399
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Entry
122442399 CDS
T07554
Symbol
GRIN1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04014
Ras signaling pathway
ccad04015
Rap1 signaling pathway
ccad04020
Calcium signaling pathway
ccad04024
cAMP signaling pathway
ccad04080
Neuroactive ligand-receptor interaction
ccad04082
Neuroactive ligand signaling
ccad04713
Circadian entrainment
ccad04720
Long-term potentiation
ccad04724
Glutamatergic synapse
ccad05010
Alzheimer disease
ccad05014
Amyotrophic lateral sclerosis
ccad05016
Huntington disease
ccad05017
Spinocerebellar ataxia
ccad05020
Prion disease
ccad05022
Pathways of neurodegeneration - multiple diseases
ccad05030
Cocaine addiction
ccad05031
Amphetamine addiction
ccad05033
Nicotine addiction
ccad05034
Alcoholism
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
122442399 (GRIN1)
04015 Rap1 signaling pathway
122442399 (GRIN1)
04020 Calcium signaling pathway
122442399 (GRIN1)
04024 cAMP signaling pathway
122442399 (GRIN1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122442399 (GRIN1)
04082 Neuroactive ligand signaling
122442399 (GRIN1)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
122442399 (GRIN1)
04720 Long-term potentiation
122442399 (GRIN1)
09159 Environmental adaptation
04713 Circadian entrainment
122442399 (GRIN1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
122442399 (GRIN1)
05014 Amyotrophic lateral sclerosis
122442399 (GRIN1)
05016 Huntington disease
122442399 (GRIN1)
05017 Spinocerebellar ataxia
122442399 (GRIN1)
05020 Prion disease
122442399 (GRIN1)
05022 Pathways of neurodegeneration - multiple diseases
122442399 (GRIN1)
09165 Substance dependence
05030 Cocaine addiction
122442399 (GRIN1)
05031 Amphetamine addiction
122442399 (GRIN1)
05033 Nicotine addiction
122442399 (GRIN1)
05034 Alcoholism
122442399 (GRIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccad04040
]
122442399 (GRIN1)
Ion channels [BR:
ccad04040
]
Ligand-gated channels
Glutamate (ionotropic)
122442399 (GRIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
DUF6724
Motif
Other DBs
NCBI-GeneID:
122442399
NCBI-ProteinID:
XP_043326119
LinkDB
All DBs
Position
5:complement(100905721..100928324)
Genome browser
AA seq
959 aa
AA seq
DB search
MSTMRLLTLALLFSCSFARAACDPKIVNIGAVLSTRKHEQMFREAVNQANKRHGSWKIQL
NATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPTPNDHFTPTPVSYTAGFYRIPVLG
LTTRMSIYSDKSIHLSFLRTVPPYSHQSSVWFEMMRVYSWNHVILLVSDDHEGRAAQKRL
ETLLEERESKSKKRNYENLDQLSYDHKRGPKAEKVLQFDPGTKNVTALLMEARELEARVI
ILSASEDDAATVYRAAAMLNMTGSGYVWLVGEREISGNALRYAPDGIIGLQLINGKNESA
HISDAVGVVAQAVHELLEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYADGVTGRVE
FNEDGDRKFANYSIMNLQNRKLVQVGIYNGTHVIPNDRKIIWPGGETEKPRGYQMSTRLK
IVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVICTGPNDTSPGSPRHTVPQCCYGFC
IDLLIKLARTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTI
NNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYL
LDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGF
AMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVEL
STMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFG
IGMRKDSPWKQNVSLSILKSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFML
VAGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPDPKKKAT
FRAITSTLASSFKRRRSSKDTSTGGGRGALQNQKDTVLPRRAVEREEGQLQMCARHRES
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatgcgcctgctgactctagccctgcttttctcctgctccttcgcccgcgcc
gcctgcgaccccaagatcgtcaacatcggcgcggtgctcagcacgcggaagcacgagcag
atgttccgcgaagctgtgaatcaggccaacaagcggcatggctcctggaagatccagctc
aacgccacctccgtcacccacaagcccaacgctatccagatggccctgtcggtgtgcgaa
gacctcatctccagccaggtctacgccatcctagttagccacccgcctacccccaacgac
cacttcacacccacccccgtctcctacacagccggcttctaccgcatccctgtcctgggg
ctgaccacgcgcatgtccatctactcagacaagagcatccacctgagcttcctgcgcacc
gtgccgccctactcccaccagtccagcgtctggttcgagatgatgcgcgtctacagctgg
aaccacgtcatcctcctggtcagcgacgaccacgagggccgggcggcccagaagcgcctg
gagacgctgctggaggagcgcgagtccaagagtaaaaaaaggaactatgaaaacctcgac
caactgtcctatgaccacaagcgcggacccaaggcggagaaggtgctgcagttcgacccg
gggaccaagaacgtgacggcgctgctgatggaagcacgggagctggaggcccgggtcatc
atcctctccgccagcgaggacgacgctgccaccgtgtaccgcgcagccgcgatgctgaac
atgacgggctcggggtacgtgtggctggtgggggagcgcgagatctcggggaacgccctg
cgctacgccccggacggcatcatcgggctgcagctcatcaacggcaagaacgagtcggcg
cacatcagcgacgccgtgggcgtggtggcccaggccgtgcacgagctgctcgagaaggag
aacatcaccgacccgccgcggggctgcgtgggcaacaccaacatctggaagaccgggccg
ctcttcaagagggtgctaatgtcttccaagtacgcggacggggtgactggccgtgtggaa
ttcaatgaggacggggaccggaagtttgccaactacagcatcatgaacctgcagaaccgc
aagctggtacaagtgggcatctacaatggcactcatgtcattcccaacgacaggaagatc
atctggccaggcggagagaccgagaagccgcgcggctatcagatgtccaccaggctgaag
attgtgacgatccaccaggagcccttcgtgtatgtcaagcctacgctgagcgacggcacg
tgcaaggaagagttcaccgtcaatggggacccggtcaagaaggtgatctgcacggggccc
aatgacacgtcgccgggcagcccgcgccacactgtgccccagtgttgctacggcttctgc
atcgatctgctcatcaagctggcgcggaccatgaatttcacttacgaggttcacctggtg
gccgacggcaagtttggcacgcaggagcgggtgaacaacagcaataagaaggagtggaac
gggatgatgggcgagctgctcagcgggcaggcggacatgatcgtggccccgctgaccatc
aataacgagcgcgcgcagtacatcgagttctcgaagcccttcaagtaccagggcctgacc
attctggtcaagaaggagatcccgcggagcacgctggactccttcatgcagcccttccag
agcacgctgtggctgctggtggggctgtccgtgcacgtggtggctgtgatgctctacctg
ctggaccgcttcagtcccttcggccggttcaaagtgaacagcgaggaggaggaggaggat
gcgctgaccctgtcttcggctatgtggttctcatggggcgtcctgctcaactcaggcatc
ggggaaggcgcccccagaagcttctcggcgcgcatcctgggcatggtgtgggcggggttc
gccatgatcattgtggcctcctacaccgccaacctggcggccttcctggtgctggaccgg
cccgaagagcgcatcaccggcatcaacgacccgcgactgaggaatccctcggacaagttc
atctacgcgacggtgaagcagagttcggtggacatctacttccggcggcaggtggagctg
agcaccatgtaccggcatatggagaagcacaactacgagagcgcggcggaggccatccag
gcagtgcgagacaacaagctgcacgccttcatctgggactcggcggtgctggagttcgag
gcctcgcagaagtgcgacctggtgaccacgggcgagctcttcttccgctcgggctttggc
atcggcatgcgcaaagacagcccctggaagcagaacgtctccctgtccatcctcaagtcc
cacgagaacggcttcatggaagacctggacaagacgtgggttcggtaccaggagtgcgat
tcgcgtagcaacgcccctgctaccctcaccttcgagaatatggcaggggtcttcatgctg
gtggctgggggcatcgtggccgggatcttcctgatcttcatcgagatcgcctacaaacgg
cacaaggacgcccggcggaagcagatgcagctggcgttcgcggcggtgaacgtgtggagg
aagaacctgcaggatagaaagagtggtagagcagaacccgaccctaaaaagaaagccact
tttagggctatcacctccaccctggcttccagcttcaagagacgtaggtcctccaaagac
acgagcaccgggggtggacgcggcgctttgcaaaaccaaaaagacacagtgctgccgcga
cgcgctgttgagagggaggagggccagctgcagatgtgtgcccgtcatagggagagctga
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