Cervus canadensis (wapiti): 122443348
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Entry
122443348 CDS
T07554
Symbol
AQR
Name
(RefSeq) RNA helicase aquarius
KO
K12874
intron-binding protein aquarius
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122443348 (AQR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccad03041
]
122443348 (AQR)
Spliceosome [BR:
ccad03041
]
Complex B
Other components
Prp19-related factors
122443348 (AQR)
Complex C
122443348 (AQR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
ResIII
AAA_30
UvrD-helicase
DEAD
SLFN-g3_helicase
Parvo_NS1
AAA_16
UvrD_C_2
AAA
DnaB_C
PhoH
DUF4088
NB-ARC
AAA_22
XopP
ATPase
Motif
Other DBs
NCBI-GeneID:
122443348
NCBI-ProteinID:
XP_043327338
LinkDB
All DBs
Position
6:complement(27644461..27723249)
Genome browser
AA seq
1484 aa
AA seq
DB search
MTAPAQPKKIVAPTVSQINAEFVTQLACKYWAPHIKKKSPFDIKVIEDIYEKEIVKSRFA
IRKIMLLEFSQYLENYLWMNYSPEVSSKAYLMSICCMVNEKFRENVPAWETFKKKPDHFP
FFFKCILKAALAETDGEFSLHEQTVLLLFLDHCFNSLEVDLIRSQVQQLISLPMWMGLQP
ARLELELKKTPKLRKFWNLIKKNDEKMDPEAREQAYQERRFLSQLIQKFISVLKSVPLSD
PVTMDKVHYCERFIELMIDLEALLPTRRWFNTILDDSHLLVHCYLSNLVRREEDGHLFSQ
LLDMLKFYTGFEINDQTGNALTENEMTTIHYDRITSLQRAAFAHFPELYDFALSNVAEVD
TRESLVKFFGPLSSNTLHQVASYLCLLPTLPKAEDTTFDKGFLLELLVSRHERRISQIQQ
LNQMPLYPTEKIIWDENIVPTEYYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYE
IRQDIEDSVSRMKPWQSEYGGVVFGGWARMAQPIVAFTVVEVAKPNIGENWPTRVRADVT
INLNVRDHIKDEWEGLRKHDVCFLITVRPTKPYGTKFDRRRPFIEQVGLVYVRGCEIQGM
LDDKGRVIEDGPEPRPSLRGESRTFRVFLDPNQYQQDMTNTIQNGAEDVYETFNVIMRRK
PKENNFKAVLETIRNLMNTDCVVPDWLHDIILGYGDPSSAHYSKMPNQIATLDFNDTFLS
IEHLKTSFPGHNVKVTVDDPALQIPPFRITFPVRSGKGKKRKDVDGEDEDTEEAKTLIVE
PHVIPNRGPYPYNQPKRNTIQFTHTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNI
YHNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEELETEKDFSRYGRVNY
VLARRIELLEEVKRLQKSLGVPGDASYTCETAGYFFLYQVMSRWEEYISKVKNKSNTMPD
ITEVSTFFPFHEYFANAPQPIFKGRSYEEDMEIAEGCFRHIKKIFTQLEEFRASELLRSG
LDRSKYLLVKEAKIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLLLQN
PQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQGRAR
ASLCNLYNWRYKNLGNLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGESEPNPYFYQN
LGEAEYVVALFMYMCLLGYPADKISILTTYNGQKHLIRDIINRRCGSNPLIGRPNKVTTV
DRFQGQQNDYILLSLVRTRAVGHLRDVRRLVVAMSRARLGLYIFARVSLFQNCFELTPAF
SQLTARPLHLHIIPTEPFPTSRKNGERPSHEVQIIKNMPQMANFVYNMYMHLIQTTHHYH
QTLLQLPPAMVEESEEVQSQETELETEEEAMPAQADTVPDETTDASSSQETSASETETTP
NQTGASSSPEATPADSEITGTGPVTVPAENNTTHDVTSIPRETK
NT seq
4455 nt
NT seq
+upstream
nt +downstream
nt
atgacggcccctgctcagcccaagaaaatcgtggcccctacggtgtcccagatcaacgcg
gagttcgtgacccagttagcatgtaaatattgggcaccccatatcaagaaaaagtccccc
tttgatataaaggtgattgaagatatatatgagaaagaaattgtcaaatcaaggtttgcc
atcagaaagataatgctcttggaatttagccagtatcttgaaaattacctctggatgaat
tattctccagaagtgtccagcaaagcctatttaatgtcaatctgctgcatggtgaatgaa
aaattcagagaaaatgtccctgcctgggagacttttaagaagaagccagatcacttccca
ttctttttcaagtgcatcttgaaagcagcattagctgaaactgatggtgaattttcactc
cacgaacagacagtcttattgctttttcttgaccactgcttcaatagtttggaagtagac
ttgatacggagtcaagtacagcagctcatctctctcccgatgtggatgggcttacagcct
gcacgattggaattagaattaaaaaagacacctaagctaagaaaattctggaacttgatt
aaaaagaatgatgaaaagatggatccagaagcaagagaacaagcctatcaagaaagaaga
tttctttcacaactcatccagaagtttatctctgtgctgaaatcagtcccactttctgat
cctgtcactatggacaaagttcattactgtgaaagatttattgaacttatgattgatcta
gaggccctactccccacaagacgctggtttaataccatcctggatgactcccaccttttg
gttcactgttacctttccaatcttgttcgtagagaagaggatggccatcttttttcccag
cttttggacatgcttaagttctatactggttttgagattaatgaccagactggaaacgct
ctgacagagaatgagatgacaactattcactatgacagaattacttctctccagagagct
gcttttgcacatttccctgaactctatgattttgctctctcaaatgtggcagaagtagat
actcgggaatccttggtcaagtttttcggacctcttagttccaataccctccaccaggtg
gcatcatacctctgcttgttaccaacccttcctaaagctgaagacacgacttttgataaa
ggatttcttctagaattgttggtatctcgtcatgagcgtcgaatttctcagattcagcag
ttgaaccaaatgcctttgtatccaactgagaagatcatatgggatgaaaatattgtccca
actgaatactattctggggaaggttgtcttgctcttcccaagttgaatttgcagtttttg
actcttcatgactaccttctaaggaacttcaatctcttccgcctagaatcaacttatgaa
attaggcaggacatcgaggatagtgtcagcagaatgaagccatggcagtcagagtatggc
ggtgtggtgtttggtggctgggctcgaatggcccagcccattgtggcgttcactgtggtt
gaggttgctaaacccaacataggtgaaaactggccaacccgagttcgtgcggatgttacc
atcaatctgaatgtcagagatcacatcaaagatgagtgggaaggccttcggaagcatgat
gtatgctttttaattactgtgcgtcccacaaaaccttacggcaccaagtttgaccgaaga
agaccttttattgagcaggttggcctagtttacgtcagaggctgtgaaatccagggcatg
ctagatgataaagggcgtgtcattgaagacggacctgaacccagacccagtcttagagga
gaatcaaggacttttagagtgtttttggatccaaatcagtatcaacaagatatgaccaat
actatacaaaatggagcagaagatgtgtatgagactttcaatgtaataatgagaagaaaa
ccaaaggaaaataactttaaggctgtgctggagacgatccggaacctgatgaacactgat
tgtgtggtccctgactggctgcacgacatcattttaggttacggggatccgagtagtgca
cattattccaaaatgcccaatcagattgccacccttgatttcaatgatacatttctctcc
attgaacatttaaaaaccagctttcctggtcataatgttaaagtaactgtggatgaccca
gctctacagataccccctttcaggataacttttccagtaagaagtggaaaggggaagaag
cggaaagatgtagatggggaagatgaagacaccgaggaggcaaaaactttgattgttgaa
cctcatgttattcctaatagaggtccttatccttacaaccaacccaaacgtaatacaatt
cagttcactcatacacagatagaggccatccgtgctggaatgcagcctgggctgactatg
gttgtgggcccaccaggtacaggaaaaacagatgtggcagttcaaattatatccaacatc
taccataatttcccagagcagaggactctgattgttactcattccaatcaggccctgaac
cagttgtttgagaaaatcatggctttagacattgacgagcgccacctcctgcgtcttggt
catggagaagaagagctggagaccgagaaagatttcagcaggtatggaagagttaattat
gtcctagctcgaagaatagaacttttagaagaagtcaaacgattgcagaagagtctaggg
gttccaggagatgcttcatacacttgtgaaactgcgggctatttcttcttgtatcaggta
atgtctcgttgggaagagtatatcagcaaagtgaaaaataaaagtaacacgatgccagat
attactgaagtctccactttcttcccgtttcatgagtactttgcaaatgccccacaaccc
atttttaaaggccgatcttatgaagaagacatggaaattgctgaaggatgtttcaggcat
attaagaaaatctttactcagcttgaggaattcagagcctctgaactgcttcgaagtgga
ctagacagatctaaataccttttggtgaaagaagccaaaatcattgctatgacctgtact
catgctgccctaaaacgacatgatttagtcaagttaggtttcaagtatgacaacatttta
atggaggaagctgctcagattctggagatagaaacttttatacctcttcttctacagaat
cctcaggatggttttagccgactaaaacgttggattatgatcggtgatcatcaccagtta
cctccagtcattaagaacatggcctttcagaagtattcaaacatggagcagtccctcttc
actcgctttgtcagggttggagttcctactgtggacctcgatgcccaggggagggccaga
gcaagcttgtgcaacctctacaactggcgatacaagaatctaggaaacctgccccacgtg
cagctcttgccggagtttagcacagccaacgctggcttgctctatgacttccagctcatt
aatgttgaagattttcagggagttggagaatctgagcctaatccttacttttatcagaat
cttggagaggcagaatacgtagtggcactttttatgtacatgtgcttactcggctaccct
gctgacaagatcagcattctgacaacgtataatgggcaaaaacatcttattcgtgacatc
atcaacagacgatgcggaagcaatccattgattggaagacccaataaggtgacaactgtt
gacagatttcaaggtcaacagaacgactacattcttctgtctctagtacgaaccagggca
gtgggccatctgagggatgtccgtcgcttagtggtcgccatgtctagagccagacttgga
ctttatatcttcgccagagtatccctcttccaaaactgttttgaactaactccagctttc
agccagctcacagcccgcccacttcatttgcatataattccaacagaacctttcccaacc
agtagaaagaatggagagagaccatcccatgaagtacagataataaagaatatgccccag
atggcaaactttgtatacaacatgtatatgcatttgatacagaccacacatcattatcat
cagactttattacagctaccacctgctatggtagaagaaagtgaggaagttcaaagtcag
gaaacagagttggaaacagaagaagaggccatgcctgctcaagctgacactgtacctgat
gaaacaacagatgccagctccagtcaggaaacctcagcctctgagactgaaaccaccccc
aatcagacaggagccagctccagtccagaggctacccctgctgactctgagatcactggg
acaggaccggtaactgtaccagcggagaataacaccactcatgatgtcacatccatcccc
agagaaaccaagtag
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integrated database retrieval system
