Cervus canadensis (wapiti): 122443410
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Entry
122443410 CDS
T07554
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04140
Autophagy - animal
ccad04148
Efferocytosis
ccad05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122443410 (VPS18)
04148 Efferocytosis
122443410 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
122443410 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccad04131
]
122443410 (VPS18)
Membrane trafficking [BR:
ccad04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
122443410 (VPS18)
Hops complex
122443410 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_Vps41
zf-RING_5
zf-C3HC4_2
zf-RING_16
KNOX2
zf-ANAPC11
zf-RING_2
zf-RING_UBOX
zf_RING_Vps8
zf-rbx1
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
122443410
NCBI-ProteinID:
XP_043327447
LinkDB
All DBs
Position
6:37410215..37418832
Genome browser
AA seq
973 aa
AA seq
DB search
MASILDEYEDSLSRSTVLQPGCPSVGIPHSGYVNAQLEKEAPIFMKQRIDFTPSERITSL
VVSCNQLCMSLGKDTLLRIDLGKANEPNHMELGRKDDAKVHKMFLDPTGSHLLIALSSTE
VLYVNRNGQKVRPLARWKGQLVESVGWNKALGTESSTGPILVGTAQGQIFEAELSASEGG
LFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPEGRGFVIATTRQRLFQFIGRVAEGAE
AQGFSGLFAAYADHPPPFREFPSSLGYSELAFYTPKLRSAPRAFAWMMGDGVLYGSLDCG
RPDSLLSEERVWEYPEGVGPGASPPLAIVLTQFHFLLLLADRVEAVCTLTGQVVLRDHFL
EKFGPLKHMVKDSSTGHLWAHTERAVFRYHVQREARDVWRTYLDMNRFDLAKEYCRERPD
CLDTVLAREADFCFRQRRYLESARCYALTQSYFEEIALKFLEARQEEALAEFLQRKLANL
KPAERTQATLLTAWLTELYLSRLGALQGDPDALNLYRETRERFRSFLSSPRHKEWLFASR
ASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLARHRDPQLFYKFSP
ILIRHIPHQLVDAWIEMGSRLDARQLIPALVNYSQGGEAQQVSQAIRYMEFCVNVLGETE
QAIHNYLLSLYARGQPASLLAYLEQAGASPHRVHYDLKYALRLCAEHGHHRACVHVYKVL
ELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKIARHVVQEEEDVQTAMACLASC
PLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQELQREMEEATASAQRIRRDLQEL
RGRYGTVEPQDKCATCDFPLLNRPFYLFLCGHMFHADCLLQAVRPGLPAYKQARLEELQR
KLGAAPPPAKGSARAKEAEVGAAAGGPSREQLKADLDELVAAECVYCGELMIRSIDRPFI
DPQRYEEEHLSWL
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctatcctggatgaatacgaggactccctgtcccgctcgaccgtcttgcagccc
ggctgccccagcgtgggcatcccccactcgggatatgtgaatgcccagctagagaaggaa
gcacccatcttcatgaagcagcgcattgactttaccccttccgagcgcatcaccagtctt
gttgtctcctgcaatcagctctgcatgagcctaggcaaggatacactactccgcattgac
ttgggcaaagcaaatgaacccaaccacatggagctggggcgcaaggatgatgccaaagtt
cacaagatgttcctggaccctactggctctcatctgctgatcgctctgagcagcactgag
gtcctctacgtgaatcgtaatggacagaaggttcggcccctggcacgctggaaggggcag
ctggtggagagtgtgggctggaataaggccctgggcaccgagagcagcacgggccccatc
ctggtcggcaccgcccaagggcagatctttgaagcagagctttcggccagcgagggtggg
ctttttggccctgccccggatctctacttccgtccactgtacgtgctaaatgaagaaggg
ggcccagcacctgtgtgctcccttgaggctgagcggggccctgaaggacgcggctttgtc
attgccaccactcggcagcgcctcttccagttcataggccgagtggcagagggagctgag
gcccagggtttctcggggctctttgctgcctatgctgaccacccacccccattccgtgag
ttccccagcagtctgggctacagcgagctggccttctacacccccaagttgcgctctgca
ccccgggccttcgcctggatgatgggagacggcgtgttgtatggatcattggactgcggg
cgtccggactccctgctgagcgaggagcgggtctgggagtacccagagggggtgggtccc
ggggccagcccacccctggccatcgtcctgacccagttccacttcctgctgctgctggca
gaccgggtggaggcggtatgcacgctgacagggcaggtggtgcttcgagaccacttcctg
gagaagttcgggccactgaagcacatggtgaaggactcctccaccggccacctgtgggcc
cacaccgagcgggctgtcttccgctaccacgtgcagcgggaggcacgggatgtctggcgc
acctacctggacatgaaccgcttcgacctggccaaggagtattgtcgagagcggcctgac
tgcctggacacagtcctggcccgggaggccgacttttgcttccgccagcgtcgctacctg
gagagcgcccgctgctatgccctgactcagagctactttgaagagatcgcccttaagttc
ttggaggcccgacaggaggaggcgctggccgagttcctgcagcgaaaactggccaatttg
aagcctgccgagcgaacccaggcaactctgctgaccgcctggctgacggagctctacttg
agccggcttggggccctgcagggtgacccagatgccctgaacctctaccgggaaacccgt
gagcgcttccgctccttcctcagtagccctcgccacaaggagtggctcttcgccagccgg
gcctccatccacgagctgttggccagccacggggacacggagcacatggtgtacttcgct
gtgatcatgcaggactatgagcgtgtggtggcgtaccactgccagcatgaggcctacgag
gaggccttggccgtgctggcccgccaccgtgatccccagctcttctacaagttctcgccc
atcctcatccgtcacatccctcaccagctggtggacgcctggattgagatgggcagccgg
ctagatgcccggcagctcatccctgccctggtgaactatagccaaggtggcgaggcccag
caggtgagccaagccatccgctacatggagttctgcgtgaacgtgctgggcgagaccgag
caggccattcacaattacctgctgtcgctctatgcccggggccagccggcctcactgctg
gcctacctggagcaggccggggccagcccacaccgcgtgcattatgatctcaagtatgcg
ctgcggctctgcgctgagcacggccaccaccgcgcttgtgtccacgtctacaaggtcctg
gagctgtatgaggaggctgtagacctggccctgcaggtggacgtggacctggccaagcag
tgtgctgacttgcctgaggaagacgaggagctgcgcaagaagctgtggctgaagattgcg
cggcacgtggtgcaggaggaagaagatgtgcagacggccatggcctgcctggccagctgt
cccctgctcaagattgaagacgtgctgcctttctttcctgacttcgtcaccattgaccac
ttcaaggaggccatctgcagctcactgaaggcctataaccaccacatccaagagctacag
cgagagatggaagaggccacagccagtgcccagcgcatccggagagacctgcaggagctg
cggggccgctatggcaccgtggagccccaggacaaatgtgccacctgcgacttccccctg
ctcaaccgccctttttacctcttcctctgtggccacatgttccatgctgactgcctgctg
caggctgtgcggcccggcctgccagcctacaagcaggcccggcttgaggagctgcagcga
aagctaggggctgctccaccccctgccaagggctctgcccgggctaaggaggctgaggtg
ggtgctgctgccggggggcccagccgggaacagctcaaagctgacctggatgaacttgtg
gctgctgagtgtgtgtactgtggggagctgatgatccgctctattgaccggcccttcatc
gacccccagcgctacgaggaggagcacctcagttggttgtag
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