Cervus canadensis (wapiti): 122443591
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Entry
122443591 CDS
T07554
Symbol
MYO5C
Name
(RefSeq) unconventional myosin-Vc isoform X1
KO
K10357
myosin V
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
122443591 (MYO5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccad03019
]
122443591 (MYO5C)
04131 Membrane trafficking [BR:
ccad04131
]
122443591 (MYO5C)
03029 Mitochondrial biogenesis [BR:
ccad03029
]
122443591 (MYO5C)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccad04812
]
122443591 (MYO5C)
Messenger RNA biogenesis [BR:
ccad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
122443591 (MYO5C)
mRNA cycle factors
P-body specific factors
122443591 (MYO5C)
Membrane trafficking [BR:
ccad04131
]
Others
Actin-binding proteins
Myosins
122443591 (MYO5C)
Mitochondrial biogenesis [BR:
ccad03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
122443591 (MYO5C)
Cytoskeleton proteins [BR:
ccad04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
122443591 (MYO5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
DUF3220
AAA_22
AAA_13
Motif
Other DBs
NCBI-GeneID:
122443591
NCBI-ProteinID:
XP_043327897
LinkDB
All DBs
Position
6:53938825..54053165
Genome browser
AA seq
1742 aa
AA seq
DB search
MAVAELYTKYNRVWIPDSEEVWKSAEIAKDYRVGDKVLQLLLEDGTELDYSVDPECLPPL
RNPDILVGENDLTALSYLHEPAVLHNLRIRFAESKLIYTYSGIILVAMNPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYAMRYFAT
VSKSSSNAHVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDERNQIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASAQQSEFKHLKLGSAEEFNYTRMGGSTVLEGVNDR
ADMIETQKTFALLGFKEDFQMDVFKVLAAILHLGNVQITAVGHERSVINEDDGHLEVFCE
LLGLESGRVAQWLCNRKIVTTSETVVKPMTRPQAVNARDALAKKIYAHLFDFIVERINQA
LHFSGKQHTFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPHGTDENWLQKLYNNFVNKNSLFEKPR
MSNTSFIIQHFADKVEYKCEGFLEKNRDTVYDMLVEILRASKFHLCANFFQENPVPSSPF
GSAITVKSAKPVIKPNNKHFRSTVGSKFRSSLYLLMETLNATTPHYVRCIKPNDEKLPFE
FDSKRIVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYGVLMTKQELSFSDKKEVCKVV
LHRLIQDSNQYQFGKTKIFFRAGQVAYLEKLRLDKLRQGCIVIQKHVRGWLQRKKFLRER
RAAEIIQQYFRGQKTVRKAVTATALKEAWAAIVIQKYCRAYLVRNLYQLIRVATITIQAY
TRGFLARRRYQKMLKEHKAVILQKYARAWLARRRFQNIRRFVLNIQLTYRVQRLQKKLED
QNKENHGLVEKLTCLAALRASDVEKIQKLESELDRAATHRQNYEEKGMRYRASVEEKLAK
LQKHNSELEIQKEQIQQKLQEKTEELKEKMDNLTKQLFDDVQKEEQQRILLEKSFELKTQ
DYEKQIRSLREEIKALKDEKMQLQRQLEEERVTSDGLKGEVARLSKQAKTISEFEKEIEL
LQTQKIDVEKHVQSQKREMREKMSEITRQLLESYDIEDVRNRLSLEDLEHLNEDGELWFA
YEGLKKATRVLENHFQSQKDCYEKEIEALNFKVVHLSQEINHLQKLFREENDINESIRHE
VTRLTSENMMIPDFKQQISELEKQKQDLEIRLNEQTETMKGKLEELSNQLNHNQEEEGTQ
RKTIEAQNEIHTKEKEKLMDKIQEMQEASEHLRKQFETENEVKSSFRQEASRLTMEKRDL
EEELDMKERVIKKLQDQVKTLTKTIEKANDVHLSSGPKEYLGMLEYKREDEAKLIQNLIL
DLKPRGVVVNMIPGLPAHILFMCVRYADSLNDADMLKSLMNSTISGIKQVVKEHLEDFEM
LSFWLSNTCHFLNCLKQYSGEEEFMKHNSPHQNKNCLNNFDLSEYRQILSDVAIRIYHQF
IIVMENNIQPIIVPGMLEYESLQGISGLKPTGFRKRSSSIDDTDAYTMTSVLQQLSYFYS
TMCQNGLDPEIVRQAVKQLFFLIGAVTLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKDK
NLQNNLAKETLEPLSQAAWLLQVKKTTDSDAKEIYERCTSLSAVQIIKILNSYTPIDDFE
KRVTPSFVRKVQALLNSREDSSHLMLDTKYLFQVTFPFTPSPHALEMIQIPSSFKLGFLN
RL
NT seq
5229 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggccgagctatacacaaagtataacagggtttggattcctgattctgaagaa
gtttggaagtctgctgaaatagcaaaagactatagagttggcgacaaagtcttgcaactc
ctgctggaggatggaacggagctggattattccgttgatcctgaatgtctgcctccactt
cggaatcctgacatccttgtgggtgagaacgacctcacagccctcagctacctccacgag
cctgcggtgctccacaatctcagaatccgttttgcagaatccaaactcatttacacctac
agcggaatcatcttggtggccatgaatccttacaagcagctgccgatatatggagatgcc
atcatccacgcctacagcgggcagaacatgggcgacatggacccacacatatttgctgtg
gcagaagaggcatacaagcagatggccagaaacaataaaaaccagtcaataattgtaagt
ggggagtcgggtgctggaaagacagtgtctgctcgctatgccatgaggtactttgccacc
gtcagcaagtccagcagtaatgctcacgtggaagacaaggtcctagcatcaaaccccata
actgaggctgttggaaatgccaagaccacccgcaatgacaacagcagtcggtttgggaaa
tacacggaaattagttttgatgagagaaatcaaattataggtgcgaacatgagaacttac
ctgctggagaaatccagagttgtctttcaatcagaaaatgaacgaaattaccacattttc
tatcagctttgtgcatccgcacagcagtcggaatttaaacatcttaaattagggagtgca
gaagaatttaattatacgcgaatgggaggcagtacggtccttgagggtgtgaatgacaga
gccgacatgatagagactcagaagacctttgcactgctgggtttcaaggaagattttcag
atggacgtttttaaggtcctggcagccatcctacatctgggcaatgtacagatcacagca
gtgggccacgagagatcagtgatcaacgaggatgatggtcacctggaggtgttctgtgag
ctcctgggcctggagagtggcagagtggctcagtggctgtgtaatcgcaagatcgtcaca
acctccgagacagtggtgaagcccatgaccaggccccaggctgtcaatgccagggatgca
ctggccaaaaagatctacgctcacctgtttgacttcattgtggagagaattaaccaagcc
ttgcacttttcaggcaagcagcacacttttattggtgttttggacatttatggttttgaa
acctttgaggtgaacagctttgaacagttttgcatcaattatgctaatgaaaagctgcaa
cagcagtttaacctgcatgtctttaaacttgaacaagaagaatatatgaaggaagacatt
ccttggactctgatagatttttatgacaaccaaccagtcattgacctgattgaagcaaaa
atgggcattttggagttactggatgaagaatgcttgttaccacatgggactgatgaaaac
tggcttcaaaagctgtataataattttgtcaacaaaaactctttgtttgaaaaacccagg
atgtcaaacacctcctttatcatccagcactttgcagataaggtagagtataaatgtgaa
ggtttccttgagaagaacagagataccgtctatgacatgctggttgaaatcctgagagca
agcaagtttcatctctgtgccaacttttttcaagaaaatccggttccttcttccccattt
ggttcagcgatcacagttaaatctgcaaagccagtcatcaagccaaacaacaagcatttc
cggagcaccgtggggagcaagttccgcagctctctgtacttgctcatggagaccctcaac
gccaccactccccactatgtccgatgcattaagccaaacgatgagaagctgccctttgag
tttgactccaaaagaattgtccagcagctgcgagcctgtggcgtcttagaaacgattcgc
attagtgcccagagctacccttctaggtggacatacattgagttctacagccgctacggg
gtcctcatgaccaagcaggagctttcattcagcgataaaaaggaggtgtgcaaagtggtc
ttacaccggctcatccaggattctaatcagtaccagtttggcaaaaccaaaattttcttc
agagcagggcaagtggcttatttagaaaaactccggttggataaactgaggcagggttgt
attgtgatacaaaagcacgtccgtggctggctccagagaaaaaaattcctcagagagaga
cgagcggccgagatcatccagcaatacttccggggtcagaaaactgtgaggaaagcagtt
actgccacagccttaaaagaagcatgggcagccattgtcattcagaagtactgtcgagcg
tatctcgtccgtaacttgtaccagctgattcgtgtggccaccatcaccatccaggcctac
acccgaggattcctggcaaggaggaggtatcaaaagatgctgaaagaacacaaggctgtg
atccttcagaaatatgctcgggcctggctggccagacgcagattccaaaatatccgacga
ttcgtgctcaacattcagctcacttacagagttcagcgtttgcagaaaaagctagaagac
cagaacaaagagaaccacgggctggtggagaagctgacctgcttggctgcccttcgggcc
agtgacgtggagaagattcagaaactggaatctgaactggacagagcagccacccacagg
cagaattatgaggagaaggggatgagatacagggcttccgtggaagagaaattggcaaag
cttcagaagcataattcagaattggaaatacaaaaagaacaaatacagcagaagcttcaa
gagaagactgaagagttgaaagaaaaaatggataacctcaccaagcagctctttgatgat
gtgcaaaaagaagaacaacaaagaatacttcttgaaaaaagttttgaactgaaaacacaa
gactatgagaagcagatccggtctttgagagaagaaattaaagctctcaaggatgagaag
atgcaactgcagcgtcagctggaggaagagcgggtcacctctgatggcctgaaaggggaa
gtggcccgactgagcaagcaggcaaagacgatctctgagtttgaaaaggagatagagtta
cttcagacacagaagatagatgtggaaaaacatgtgcagtcccagaaaagggaaatgaga
gaaaagatgtcagagattaccagacaacttcttgagagctatgacattgaagatgtaaga
aacaggctctctctggaagatttggaacatttaaatgaggatggagaactttggtttgct
tacgaaggactaaagaaagcaacacgcgttttggagaaccatttccagtcccagaaggat
tgctatgaaaaggagattgaagctctgaacttcaaagtggtgcatctaagtcaggaaatc
aaccacctgcagaaattatttagagaagagaatgacatcaatgaaagtatccgtcatgaa
gttaccaggctaacatcagaaaacatgatgatcccagactttaaacagcaaatttcagaa
ctggaaaaacagaagcaagatcttgaaatccgcctgaatgaacaaactgaaaccatgaaa
ggaaaactagaagaattgtcaaatcagttgaatcacaatcaagaagaagaaggaacacag
agaaagaccatagaagcccaaaatgaaatacataccaaagagaaagagaagctgatggat
aagattcaagaaatgcaggaggccagcgagcacttgaggaaacaattcgaaactgaaaat
gaagtcaagagtagtttccggcaggaagcatctcgtctcactatggagaagagggatctt
gaagaagagttagacatgaaggaaagagtgattaaaaagttacaagatcaagtgaagact
ctaaccaagacaattgaaaaagccaatgacgtgcacctgtcctcgggacccaaggagtac
cttggaatgctggaatacaagagagaagatgaggccaaactcattcaaaacctcattctt
gacctgaagccccgcggtgtggtggtgaatatgatccccgggctgccagctcacatcctg
ttcatgtgtgtacgctacgcagactctctaaatgacgccgacatgctcaagtccctcatg
aacagcaccattagtggcatcaagcaggtggttaaggaacatttagaagactttgagatg
ctgtccttttggctttccaatacctgtcatttcctcaattgcctgaagcagtacagtgga
gaagaggaattcatgaagcataatagtccacatcagaataagaattgcttgaacaatttt
gacctttcagaatacagacagattcttagtgatgtggctatacgaatatatcatcagttc
attatcgtaatggaaaataacattcaaccaataatagtgccaggcatgctggagtacgag
agtctgcagggcatttctggcctgaagcccacaggcttccggaagcggtcctccagcata
gacgacacggatgcctacacgatgacctctgtcctgcagcaactgagctacttctacagc
accatgtgccagaatggcctggaccctgagatcgtgaggcaggcggtgaagcagctcttc
ttcttgatcggggcggtcaccctaaacagtctcttcctgcgcaaggacatgtgctcctgt
agaaaagggatgcagataaggtgcaacatcagttacttagaagaatggcttaaagataag
aatttacagaacaacttggccaaggaaactttggagcctctctcacaggcagcatggttg
cttcaggtgaagaagaccaccgacagtgatgccaaggagatctacgaacgctgtacctcc
ttgtctgccgtgcagatcataaagattcttaattcatacacacctatagatgactttgaa
aaaagagtgactccatccttcgttcgcaaagtgcaggctctcctaaacagcagagaggat
tcatcacacctgatgttggacaccaaatacctctttcaagtcacatttcctttcactccc
tctccacatgctctggaaatgatccaaatccccagcagttttaagcttggctttctcaat
aggttatag
DBGET
integrated database retrieval system
