Cervus canadensis (wapiti): 122443883
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Entry
122443883 CDS
T07554
Symbol
RAI1
Name
(RefSeq) retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccad03000
]
122443883 (RAI1)
Transcription factors [BR:
ccad03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
122443883 (RAI1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Neural_ProG_Cyt
Motif
Other DBs
NCBI-GeneID:
122443883
NCBI-ProteinID:
XP_043328545
LinkDB
All DBs
Position
1:26092853..26177672
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AA seq
1889 aa
AA seq
DB search
MQSFRERCGFHGKQQTYQQTSQETSRLENYRQSSQAGLSCDRQRLLTKDYYGPQPFPGYE
GGAGTPATARAGKGLSSPQAPPGRPAFAGYTVQDGSPYPGRYSGEEGLQAWGGPQPPPPQ
PQPLPGGVGKYDENLMKKTVVPPSRQYPEQGAQLPFRTHALHVQQQLPQPPPSLAYPKLQ
RQKPQSDIASPLPFPQGGHFPQQSQSFPASSTYSSSGQAGGQGAHSYKSCTAPSAQPHDR
PLTANASLAPSQRVPNLHAYQSSRLSYDTQKQQQQQQALQSRHHTQESLHYQNLTKYQHY
GQQGPGYCQPDATVRTPEQYYQTFSPGSGHSPARSVGRSPSYSSTPSPLMPNLENFPYNQ
QPLGPGAFPAGLTDHSHFMPLLNPSPTDAAGSVDTQAANCKALQKDKLPESLLSDLSLHS
LTALTSQVENISNTVQQLLLSKAAGPQKKSLKSLVARTPEQHKSQHCSPEGSGYSAEPAG
TPLSEPLSSTPQSTHAEPPEADYLSGSEDPLERSFLYCSQARGSPARVHSGSKAKPESVS
TCSVTSPDDMSTKSDDSFQSLHGSLPLDSFSKLVAGERDCPRLLLSALAQEDLASEILGL
QEAISEKADKTWVEAPGLAKDAGKPPFSLENHSACLDPVAKSAWPRPGEPEALPEALQLD
KGSSAKDFSPGLFEDPSVGFTTADPKKTAGPLSFGTKPTLGATASDPTVAFDCFPDTTSA
GSADGAHPFAWPEENLGDACPRWGLHPSELTKGLEQGGKVTDSAGQDEAREASACLGFQE
EAPPGEKAAVPRDSQQEAAGGVKEEAGGLLQCPEVGKADRWLEDSRHCCSAADFGDLPLL
PAPGRKEDLEAEEYSSLCELLGSPEQRPGLQDALSPKATLLCGKEEVEEVLDPKAGWGSP
CPLSGDSVILLGPTVGAESKVQSWFESSLSHMKPEEEGPEGVLAPGDSAAVTPEASLAQK
PNKPAVPEAPIAKKEPVPRGKSLRSRRVHRGLPEAEDSPCRAPALPKDLLLPESCTGPPQ
GQMEGAGAPGRGISEGLPRMCTRSFTALSEPRTPGPPGLPTTPAPPDKLGGKQRAAFKSG
KRVGKPSPKAASSPSNPAALPVASDSSPMGSKTKETDSLDAPGKDQRSMILRSRSRAQEA
FHSKRRRPSESRLPNCRATKKLLANNHLPATFKVTGSPQKEGRAGQRARVPKPGASGKLS
DRPLHALKRKSAFMAPVPTKKRNLVLRSGGLGGDVKEEGAEGSPTLFKRMTSPKKAKPTK
GNGEPTAKPPPLETPDTSLKLASRASFQGAMKTKVLPPRKGRGLKLEAIVQKITSPSLKK
FACRAPGAPPGNPVSPSLPEKERGLKSTGGSLLGTEEGLLNVSPGQKFPAALGAEPLCRN
PTNRSLKGKLVNSKKLSLTDGFKTEAFTSPEALLPGGTALAPKKRSRKGRAGALGLPKGS
LEKRPHLGPALLLTPRDRANGTQGGSEDSSGVGGKKPKTEELGLAAQPPEGRSCQPQTRA
QKQPGHANYSSYSKRKRLTRGRAKSTTSSPCKGRAKRRRQQQVLPLDPAEPEIRLKYISS
CKRLRADSRTPAFSPFVRVEKRGAFTTVCTVVNSPGEEPQPQRKPSSSSSSSSCSFSLDA
AGASLATLPGGSVPQPRPSLPLSSTMHLGPVVSKALSTSCLVCCLCQNPANFKDLGDLCG
PYYPEHCLPKKKPKLKEKVRLEGTCEEASLPLERTLKGLECPAAVSAAATTTTGKPPRPD
GPADPAKQGSLRTSARGLSRRLQSCYCCDGRGDGSEEAAPADKSRKHECSKEPLAEPGGD
TQEHWVHEACAVWTGGVYLVAGKLFGLQEAMKVALDMTCSSCQEAGATIGCCHKGCLHTY
HYPCASDAGCIFIEENFSLKCPKHKRLPL
NT seq
5670 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcttttcgagaaaggtgtggtttccatggcaaacagcagacctaccagcagacc
tcacaggagacgtcgcgcctggagaactataggcagtcaagtcaggccgggctgagctgc
gaccggcagcgtctgctgaccaaggactactacggcccgcagcccttccccggctacgag
ggcggcgcgggcacgcccgccaccgcgcgtgctggtaaaggcctgtcctcgccgcaggcc
ccgccagggaggccggccttcgcaggctacaccgtccaggacggcagcccctacccaggc
cgctactcaggcgaggagggcctgcaggcctgggggggcccccagccaccccctcctcag
ccgcagcccctgccaggcggggtgggcaaatatgacgagaacctgatgaaaaagacggtg
gtgccccccagccggcagtaccctgagcagggtgcccagctgcccttccggactcacgcc
ctccacgtccagcagcagctgccacagcccccgccatccctggcataccccaagctccag
aggcagaaaccccagagtgacattgcctccccgctgcccttcccccagggcggccacttc
ccccagcagtcccagtccttccccgcctcctctacctactcctccagtggccaggccggc
gggcagggggcccactcctacaagagctgcacggccccctccgcccagccccacgacagg
ccgctgaccgccaacgccagcctggcccccagccagcgggtcccgaaccttcacgcctac
cagtccagccgcctcagctatgacacacagaagcagcagcagcagcagcaggccctccag
agccgtcaccatacccaggaaagcctgcactaccaaaacctcaccaagtaccaacactat
gggcagcaaggcccaggttactgtcagccggatgcaaccgtcaggaccccagagcagtac
taccagaccttcagccccggctccggccactcacccgcccgctccgtgggccgctcaccc
tcctacagctccaccccatcaccactgatgcccaacctggagaactttccctacaaccag
cagccactcggccctggggccttccccgccggcctcactgaccacagccacttcatgccc
ctgctcaacccctccccgacagatgctgctggctctgtggacacccaggccgccaactgc
aaggccctgcagaaggacaagcttcctgagagcctgctgtcggacctcagcctgcatagc
ctcacggccctgacctcccaggtggagaacatctctaacaccgtgcagcagctgctgctg
tccaaggcggccgggcctcagaagaagagcctcaagagcctggtggcccggaccccggag
cagcacaaaagccagcactgcagccccgagggcagcggctactcggccgagccagcgggc
acaccgctgtcggagccgctgagcagcacaccacagtccacgcacgctgagccgcctgag
gctgactacctgagcggctctgaggacccactggagcgcagcttcctctactgcagccag
gcccgaggcagccccgccagggtccacagcggctccaaggccaagcccgagtccgtgtcc
acctgctccgtgacctcgccagacgacatgtccaccaagtctgacgactccttccagagc
ctgcacggcagcctgcccctcgacagcttctccaagcttgtagccggcgagcgggactgc
ccacgactgctgctcagtgccctggcacaggaggacttggcctctgagatcctggggctg
caggaggccatcagcgagaaggctgacaagacctgggtcgaggctccgggcctggccaaa
gacgccggcaagccgcccttctctctggagaaccacagcgcctgcctggaccctgtggcc
aagagtgcatggccacggccaggggagccggaggccctgcctgaggccctgcagctggac
aagggcagcagtgccaaggacttcagtccggggctatttgaagacccctctgtgggcttc
accaccgctgaccccaagaagacagctggtcccctctccttcggcaccaagcccaccctg
ggggccactgcctcagacccgaccgtggcttttgactgcttcccagacacgacctctgcc
ggctccgcggatggtgcccacccctttgcctggcccgaggagaacctgggggatgcctgt
cctcgctgggggctgcaccccagtgagctcaccaagggtctggagcagggtggaaaggtc
actgacagtgccggccaggacgaagcccgagaggcttcggcctgcctgggcttccaggag
gaggcgccccctggggagaaggctgcggtgccccgggactcccagcaggaggcggcgggc
ggagtgaaggaggaggcgggcgggctgcttcagtgccccgaggtgggcaaggccgaccgc
tggctggaggacagccggcactgctgctcggctgccgactttggggacctcccactgctg
ccggcgccaggccggaaggaggacctggaggctgaggagtactcgtccctgtgcgagctc
ctgggcagccctgagcagaggccaggcctgcaggacgcgctgtcgcccaaggccacgctg
ctgtgtggcaaggaggaggtggaggaggtgctggaccccaaggctggctggggctcccca
tgccccctctccggggattcggtcatcttgctgggccccaccgtgggtgccgagtccaag
gttcagagctggttcgagtcctccctatcccatatgaagccagaggaagaggggcccgag
ggggtgctggccccaggggattctgccgccgtgaccccggaggcctccctggcacagaag
ccgaacaagcctgctgtgcccgaggcccccatcgccaagaaagagcccgtgcctcgcggc
aaaagcttgcggagccgacgggtgcaccgggggctgcctgaggctgaggactccccgtgc
agggcaccggcactgcccaaagacctgctgctccccgaatcgtgcacggggcccccccag
ggacagatggaaggggcgggggccccgggccgggggatctcagaaggacttcccaggatg
tgcacccgctccttcacggccttgagcgagccccgtacacccggacccccaggcctgccc
accactcctgcccccccagacaagctggggggcaagcagcgagccgccttcaagtcaggc
aagcgggtggggaagccctccccaaaggccgcgtccagccccagcaacccggccgccctg
cctgtggcctctgacagcagccccatgggctccaagaccaaggagacggactcactggat
gcaccgggcaaagaccagcggtccatgatcctgcggtcccgcagcagggcccaggaggcc
ttccactccaagcgcagacggccctcggagagccgactgccaaactgccgcgccaccaag
aagctccttgccaacaaccacctgcccgccacgttcaaggtcactggcagcccccagaag
gaggggagggcgggccagcgggcgagggttcccaagcctggtgccagcggcaagctctca
gatcgacccctccatgccctcaaaaggaagtcagccttcatggctcccgtccccaccaag
aagcgcaacctggtcttacgcagtggtggccttgggggagacgtgaaggaggagggggcc
gagggctcccccaccctcttcaagaggatgacgtctcccaagaaggcaaaacccaccaag
ggcaatggtgagcccacagcgaagccaccacccctggagaccccagacaccagcctgaag
ctggcctcacgggcgtccttccagggggccatgaagaccaaggtgctgccaccccggaaa
ggccggggcttgaagctagaggcgattgtgcagaagatcacctcgcccagcctgaagaag
tttgcgtgcagagcaccaggggcccctcccgggaatcctgtgagcccatccctccccgag
aaggaacgtgggctcaagagcactgggggcagccttctggggacagaggaaggtctctta
aatgtgagccccgggcagaagttcccggcagctctgggggccgagccattgtgcagaaat
ccgaccaatagatccttaaaaggcaaactcgtgaacagtaagaaactgtccttgaccgat
ggtttcaaaacggaggccttcacgtccccagaggccctgctgcccgggggcactgccctg
gcgcctaagaagagaagccggaaaggcagagctggggcccttggactccccaaaggctcc
ctggagaaaaggcctcacctcggcccagctctgctgctgactccccgagacagggccaat
ggcacgcaggggggcagtgaggacagctctggcgtaggaggcaagaagccaaagacggag
gagctgggcctggctgcccagcccccagagggccggtcctgccagccccagacgagggca
cagaagcagccaggccatgccaactacagcagctattccaagcggaagcgcctcacacgg
ggccgggccaagagcaccacctcctcaccctgtaaggggcgggctaagcggcggcggcag
cagcaggtgctgcccctggatcctgccgagcctgaaatccgcctcaagtacatttcctcc
tgcaagcggctgcgggcagacagccgcactcccgccttctcgcccttcgtgcgggtagag
aagcggggtgcgttcaccactgtttgcactgttgtcaactcccccggagaggagccccag
ccccagaggaagccttcctcttcctcctcctcctcgtcctgctccttctccttggatgcg
gccggggcctccctagccacgctccctggaggctctgtcccacagcctcggccctccctg
cccctctcctccaccatgcacctggggcccgtggtttccaaggccctgagtacctcttgc
cttgtttgctgcctctgccaaaacccggccaacttcaaggaccttggggacctctgtggg
ccctactaccctgaacactgcctccccaaaaagaagccaaaactcaaggagaaggtgcgg
ctggagggcacctgtgaggaggcctcgctgcctcttgagaggacactcaaaggcctcgag
tgcccagctgctgtgtctgctgctgccaccaccaccaccgggaagccccccaggcctgat
ggcccagccgatccggccaagcagggctctctgcgcactagtgcccggggcctgtcccgg
cggctgcagagttgctactgctgtgatggtcggggggatggcagtgaggaggcagcccca
gctgacaagagccgtaagcacgagtgcagcaaggagccgctggccgagcctggcggggac
acccaggagcactgggtgcatgaggcctgcgccgtgtggacaggcggggtctacctggtg
gccgggaagctctttgggctacaggaggccatgaaggtggccctggacatgacttgttcc
agctgccaagaagcgggggccaccatagggtgctgccacaaaggatgcctccacacctac
cattacccgtgtgccagcgatgcgggttgtatattcattgaagagaacttttctttgaaa
tgccccaaacataagaggctgccgttgtaa
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