Cervus canadensis (wapiti): 122444003
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Entry
122444003 CDS
T07554
Symbol
TOP3A
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03440
Homologous recombination
ccad03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122444003 (TOP3A)
03460 Fanconi anemia pathway
122444003 (TOP3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccad03032
]
122444003 (TOP3A)
03400 DNA repair and recombination proteins [BR:
ccad03400
]
122444003 (TOP3A)
Enzymes [BR:
ccad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
122444003 (TOP3A)
DNA replication proteins [BR:
ccad03032
]
Eukaryotic type
DNA Topoisomerases
122444003 (TOP3A)
DNA repair and recombination proteins [BR:
ccad03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
122444003 (TOP3A)
FA (Fanconi anemia) pathway
122444003 (TOP3A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
zf-C2H2_10
Zn_ribbon_GRF_2
Zn_ribbon_recom
Motif
Other DBs
NCBI-GeneID:
122444003
NCBI-ProteinID:
XP_043328748
LinkDB
All DBs
Position
1:complement(26466155..26485997)
Genome browser
AA seq
1002 aa
AA seq
DB search
MIFPAARCALRWLPRPGARALTRAAMEVALRGVRKILCVAEKNDAAKGIADLLSGGRMRR
REGLSRFNKIYEFDYHLCGQNVTMVMTSVSGHLLAHDFRMQFRKWQSCNPLVLFEAEIEK
YCPENFVDIKKTLEREARQCQALVIWTDCDREGENIGFEVIHVCKAVKPSLQVLRARFSE
ITARAVRTACENLTEPDQRVSDAVDVRQELDLRIGAAFTRFQTLRLQKIFPEVLAEQLIS
YGSCQFPTLGFVVERFKAIQAFVPEVFHKIRVTHDHIDGVVEFSWKRHRLFNHTACLVLY
QLCMEDPRATVVEVRSKAKSKWRPQALDTVELEKLASRKLRINAKETMRIAERLYTQGYI
SYPRTETNIFPKDLDLAALVELQTPDPRWGAFARNILERGGPTPRNGNKSDQAHPPIHPT
KYTDSLQGDEQRLYELIVRHFLACCSQDAQGQETTVEIDIAQERFVAQGLMILARNYLDV
YPYDRWSDKTLPVYEQGTCFQPSTVEMVDGETSPPQLLTEADLIALMEKHGIGTDATHAE
HIETIKARMYVGLTPDKRFLPGHLGMGLVEGYDSMGYEMSKPDLRAELEADLKLICEGKK
DKLVVLHQQVQKYKQVFIEAVAKARKLDEALSQYFGAAAEVAPQEALPAVPEPIRKCPQC
GQDMVLKTRKSGGFYLSCTGFPECRSAVWFPDSVLEASRDESVCPVCQPHPVYRLKFKFK
RGSLPPTMPLEFVGCIGGCDETLREILALRFSRGAPRVGQPASQTSGHLQASQSLNRMDS
GQQGQPRPPVTKPSKALTRTLPPPAVESEGNSVTCNCGQEALLLTVRKEGPNQGRQFYKC
GGGGCSFFLWADSGHPGAGPPSSASRPPGGPLGRPPGSGTLPGGSGRPGNGGSGGASCLC
GQPAVTRTVQKDGPNQGRQFHTCAQPREQQCGFFQWVDENVAPGTFGGTLWPGSRGGTQG
LEARSKRARAGSSDMGSAAKKPRKCSLCHQPGHTRPFCPQNR
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgatctttccggccgcccgctgcgctctccggtggctgccgcggcccggtgctcgggcc
ctgactcgcgccgccatggaggtggccctgcgaggcgtccggaaaatcctttgcgtggcc
gagaagaacgacgcggccaagggcatagccgacctgctctccggcggccgcatgcggcgg
agggaaggactttcaagattcaacaagatctatgagtttgattatcatctgtgtggccag
aacgtcaccatggtaatgacctcagtctcaggacacttgctggcccatgatttccggatg
cagtttcgcaaatggcagagctgcaatcctcttgtcctctttgaagcggaaattgaaaag
tactgcccagagaattttgtagacatcaagaaaactctggagcgagaggcccggcaatgc
caggccctggtgatctggaccgactgtgacagagagggtgaaaacatcgggtttgaggtc
atccacgtgtgcaaggctgtgaagcccagcctgcaggtgctgcgagcccgtttctccgag
atcactgcccgcgccgtccggacggcatgtgaaaacctgacggagcccgaccagagagtg
agcgatgccgtggatgtgaggcaggagttggacctgcggattggggcggccttcaccagg
tttcagacgctgcggctgcagaagatcttccctgaggtgctggcggagcagcttattagc
tacggcagctgccagttccccacactggggttcgtggtggagaggttcaaagccattcag
gcttttgtgccggaagtcttccacaagatccgagtgactcatgaccacatcgatggtgtg
gtggagttcagctggaaaaggcatcgtctcttcaaccacacggcatgtcttgtcctctat
cagctgtgcatggaggatcccagggcgacggtggtggaggtcaggtccaaagccaagagc
aagtggaggcctcaagctctggacactgtggagctggagaaactggcatctcggaagttg
aggataaatgctaaagaaaccatgaggattgcagaaaggctgtatacccaagggtacatc
agctatcctcgaactgaaacgaacattttccccaaagatttagacctggcggcgctggtg
gaactgcagaccccggatccacgctggggggcctttgctcgaaacattctagagcgcggt
ggccccaccccacgcaatggaaataagtctgaccaagcacaccctcccatccaccccacc
aaatacactgacagcctgcagggagatgagcagcggctgtacgagctcatcgtccgccac
ttcctggcctgctgctcgcaggacgcccagggccaggagaccaccgtggagattgacatt
gcacaggagcgctttgtggcccaaggcctcatgatcctggcccggaactatctggatgtg
tacccgtatgatcgctggagcgacaagaccctccccgtctacgagcaaggcacctgcttt
cagcccagcactgtggagatggtggatggggagaccagtcccccgcagctgctcactgag
gccgacctcattgccctcatggagaagcacggcatcggtacggacgccacgcatgccgag
cacatcgagaccatcaaggcccggatgtacgttgggctcacgccagacaagcgctttctc
cctggacacctgggcatggggctcgtggaaggctatgactccatgggttatgagatgtcc
aagcctgatctgcgggccgagctggaggctgacctgaagctcatctgcgaggggaagaag
gacaagctggtggtcctgcatcagcaggtgcagaagtacaagcaggtgttcatcgaagcc
gtggccaaagccaggaagttggacgaggccttgtcccagtacttcggggcggctgcagag
gtggccccacaggaagccctcccggctgtgcccgagcccatcaggaagtgtccgcagtgc
ggccaggacatggttctcaagaccaggaagagcggcgggttttacctcagttgcacgggc
ttccccgagtgtcggtcggccgtctggttcccggacagcgtgctagaggccagcagggat
gagagcgtgtgtccagtgtgccagccacaccctgtttacaggttgaagttcaagtttaaa
cgaggcagcttgcccccaaccatgcccctagaatttgtcggctgcatcggcgggtgtgac
gagaccctgagggagatcctggccctcaggttctcacggggcgcccccagagtcggccag
cccgccagccagacctccggccacctgcaggctagccagtccctgaatagaatggacagt
ggccagcagggccagccccggccccccgtcaccaagccctcgaaggctttgaccaggact
ctgcctccacccgctgttgagagtgagggcaactcggtgacctgcaactgtggccaggag
gccttgctgctcaccgtccggaaggaggggcccaaccagggccgccagttctacaagtgc
ggcggtggcggctgcagcttctttctgtgggctgacagcggccacccaggagccgggcct
ccctcctcagcatccagacccccgggcggccccctgggacgccctccgggctcagggact
cttccgggcgggtccggcaggcccggcaatggtggcagcggtggcgcatcctgcctgtgt
ggccagccggccgtcacacgcaccgtgcagaaggatgggcccaaccaggggcgccagttc
cacacgtgcgcccagccccgtgagcagcagtgcggcttcttccagtgggtggacgagaac
gtggccccagggaccttcggaggcaccctctggccaggaagtagaggaggaacccaggga
ctggaggccagaagcaagagggctcgggccggctcttcagacatggggtctgcagccaag
aaaccccggaagtgcagcctttgccaccagcctggacatacccgtcccttctgtcctcag
aacagatga
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