Cervus canadensis (wapiti): 122444003
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Entry
122444003 CDS
T07554
Symbol
TOP3A
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03440
Homologous recombination
ccad03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122444003 (TOP3A)
03460 Fanconi anemia pathway
122444003 (TOP3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccad03032
]
122444003 (TOP3A)
03400 DNA repair and recombination proteins [BR:
ccad03400
]
122444003 (TOP3A)
Enzymes [BR:
ccad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
122444003 (TOP3A)
DNA replication proteins [BR:
ccad03032
]
Eukaryotic type
DNA Topoisomerases
122444003 (TOP3A)
DNA repair and recombination proteins [BR:
ccad03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
122444003 (TOP3A)
FA (Fanconi anemia) pathway
122444003 (TOP3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
zf-C2H2_10
Zn_ribbon_GRF_2
Zn_ribbon_recom
Motif
Other DBs
NCBI-GeneID:
122444003
NCBI-ProteinID:
XP_043328748
LinkDB
All DBs
Position
1:complement(26466155..26485997)
Genome browser
AA seq
1002 aa
AA seq
DB search
MIFPAARCALRWLPRPGARALTRAAMEVALRGVRKILCVAEKNDAAKGIADLLSGGRMRR
REGLSRFNKIYEFDYHLCGQNVTMVMTSVSGHLLAHDFRMQFRKWQSCNPLVLFEAEIEK
YCPENFVDIKKTLEREARQCQALVIWTDCDREGENIGFEVIHVCKAVKPSLQVLRARFSE
ITARAVRTACENLTEPDQRVSDAVDVRQELDLRIGAAFTRFQTLRLQKIFPEVLAEQLIS
YGSCQFPTLGFVVERFKAIQAFVPEVFHKIRVTHDHIDGVVEFSWKRHRLFNHTACLVLY
QLCMEDPRATVVEVRSKAKSKWRPQALDTVELEKLASRKLRINAKETMRIAERLYTQGYI
SYPRTETNIFPKDLDLAALVELQTPDPRWGAFARNILERGGPTPRNGNKSDQAHPPIHPT
KYTDSLQGDEQRLYELIVRHFLACCSQDAQGQETTVEIDIAQERFVAQGLMILARNYLDV
YPYDRWSDKTLPVYEQGTCFQPSTVEMVDGETSPPQLLTEADLIALMEKHGIGTDATHAE
HIETIKARMYVGLTPDKRFLPGHLGMGLVEGYDSMGYEMSKPDLRAELEADLKLICEGKK
DKLVVLHQQVQKYKQVFIEAVAKARKLDEALSQYFGAAAEVAPQEALPAVPEPIRKCPQC
GQDMVLKTRKSGGFYLSCTGFPECRSAVWFPDSVLEASRDESVCPVCQPHPVYRLKFKFK
RGSLPPTMPLEFVGCIGGCDETLREILALRFSRGAPRVGQPASQTSGHLQASQSLNRMDS
GQQGQPRPPVTKPSKALTRTLPPPAVESEGNSVTCNCGQEALLLTVRKEGPNQGRQFYKC
GGGGCSFFLWADSGHPGAGPPSSASRPPGGPLGRPPGSGTLPGGSGRPGNGGSGGASCLC
GQPAVTRTVQKDGPNQGRQFHTCAQPREQQCGFFQWVDENVAPGTFGGTLWPGSRGGTQG
LEARSKRARAGSSDMGSAAKKPRKCSLCHQPGHTRPFCPQNR
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgatctttccggccgcccgctgcgctctccggtggctgccgcggcccggtgctcgggcc
ctgactcgcgccgccatggaggtggccctgcgaggcgtccggaaaatcctttgcgtggcc
gagaagaacgacgcggccaagggcatagccgacctgctctccggcggccgcatgcggcgg
agggaaggactttcaagattcaacaagatctatgagtttgattatcatctgtgtggccag
aacgtcaccatggtaatgacctcagtctcaggacacttgctggcccatgatttccggatg
cagtttcgcaaatggcagagctgcaatcctcttgtcctctttgaagcggaaattgaaaag
tactgcccagagaattttgtagacatcaagaaaactctggagcgagaggcccggcaatgc
caggccctggtgatctggaccgactgtgacagagagggtgaaaacatcgggtttgaggtc
atccacgtgtgcaaggctgtgaagcccagcctgcaggtgctgcgagcccgtttctccgag
atcactgcccgcgccgtccggacggcatgtgaaaacctgacggagcccgaccagagagtg
agcgatgccgtggatgtgaggcaggagttggacctgcggattggggcggccttcaccagg
tttcagacgctgcggctgcagaagatcttccctgaggtgctggcggagcagcttattagc
tacggcagctgccagttccccacactggggttcgtggtggagaggttcaaagccattcag
gcttttgtgccggaagtcttccacaagatccgagtgactcatgaccacatcgatggtgtg
gtggagttcagctggaaaaggcatcgtctcttcaaccacacggcatgtcttgtcctctat
cagctgtgcatggaggatcccagggcgacggtggtggaggtcaggtccaaagccaagagc
aagtggaggcctcaagctctggacactgtggagctggagaaactggcatctcggaagttg
aggataaatgctaaagaaaccatgaggattgcagaaaggctgtatacccaagggtacatc
agctatcctcgaactgaaacgaacattttccccaaagatttagacctggcggcgctggtg
gaactgcagaccccggatccacgctggggggcctttgctcgaaacattctagagcgcggt
ggccccaccccacgcaatggaaataagtctgaccaagcacaccctcccatccaccccacc
aaatacactgacagcctgcagggagatgagcagcggctgtacgagctcatcgtccgccac
ttcctggcctgctgctcgcaggacgcccagggccaggagaccaccgtggagattgacatt
gcacaggagcgctttgtggcccaaggcctcatgatcctggcccggaactatctggatgtg
tacccgtatgatcgctggagcgacaagaccctccccgtctacgagcaaggcacctgcttt
cagcccagcactgtggagatggtggatggggagaccagtcccccgcagctgctcactgag
gccgacctcattgccctcatggagaagcacggcatcggtacggacgccacgcatgccgag
cacatcgagaccatcaaggcccggatgtacgttgggctcacgccagacaagcgctttctc
cctggacacctgggcatggggctcgtggaaggctatgactccatgggttatgagatgtcc
aagcctgatctgcgggccgagctggaggctgacctgaagctcatctgcgaggggaagaag
gacaagctggtggtcctgcatcagcaggtgcagaagtacaagcaggtgttcatcgaagcc
gtggccaaagccaggaagttggacgaggccttgtcccagtacttcggggcggctgcagag
gtggccccacaggaagccctcccggctgtgcccgagcccatcaggaagtgtccgcagtgc
ggccaggacatggttctcaagaccaggaagagcggcgggttttacctcagttgcacgggc
ttccccgagtgtcggtcggccgtctggttcccggacagcgtgctagaggccagcagggat
gagagcgtgtgtccagtgtgccagccacaccctgtttacaggttgaagttcaagtttaaa
cgaggcagcttgcccccaaccatgcccctagaatttgtcggctgcatcggcgggtgtgac
gagaccctgagggagatcctggccctcaggttctcacggggcgcccccagagtcggccag
cccgccagccagacctccggccacctgcaggctagccagtccctgaatagaatggacagt
ggccagcagggccagccccggccccccgtcaccaagccctcgaaggctttgaccaggact
ctgcctccacccgctgttgagagtgagggcaactcggtgacctgcaactgtggccaggag
gccttgctgctcaccgtccggaaggaggggcccaaccagggccgccagttctacaagtgc
ggcggtggcggctgcagcttctttctgtgggctgacagcggccacccaggagccgggcct
ccctcctcagcatccagacccccgggcggccccctgggacgccctccgggctcagggact
cttccgggcgggtccggcaggcccggcaatggtggcagcggtggcgcatcctgcctgtgt
ggccagccggccgtcacacgcaccgtgcagaaggatgggcccaaccaggggcgccagttc
cacacgtgcgcccagccccgtgagcagcagtgcggcttcttccagtgggtggacgagaac
gtggccccagggaccttcggaggcaccctctggccaggaagtagaggaggaacccaggga
ctggaggccagaagcaagagggctcgggccggctcttcagacatggggtctgcagccaag
aaaccccggaagtgcagcctttgccaccagcctggacatacccgtcccttctgtcctcag
aacagatga
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