Cervus canadensis (wapiti): 122445016
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Entry
122445016 CDS
T07554
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122445016 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccad03019
]
122445016 (DHX36)
03012 Translation factors [BR:
ccad03012
]
122445016 (DHX36)
Enzymes [BR:
ccad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
122445016 (DHX36)
Messenger RNA biogenesis [BR:
ccad03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
122445016 (DHX36)
Translation factors [BR:
ccad03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
122445016 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
AAA_19
nSTAND3
PhoH
ATPase
AAA_14
NPHP3_N
AAA_23
RsgA_GTPase
DUF6782
AAA_34
Motif
Other DBs
NCBI-GeneID:
122445016
NCBI-ProteinID:
XP_043329884
LinkDB
All DBs
Position
7:86335716..86381484
Genome browser
AA seq
1014 aa
AA seq
DB search
MSYDYHQNWGRDGGPRSSGGGYGGSYGGNHGGGHGGSRGSGGGGGGGGGGGGGRGGRGRH
PGHLKGREIGLWYAKKQGQKNKEAERQERAVVHMDERREEQIVQLLHSVQAKNDRDEEAQ
ISWFAPEDHGYSTEAPAENKPNSVKKVEHQEKKKINQEKRPFRIRDKYIDRDSEYLFQEN
EPDAILDQQLLEDLQKKKTDLRYIEMQHFREKLPSYGMQKELVNMIDNHQVTVISGETGC
GKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQI
RLQSRLPRKQGSILYCTTGIILQWLQSDPHLSSVSHIVLDEIHERNLQSDVLMTVVKDLL
SFRSDLKVVLMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRYVPEQKEH
RSQFKKGFMQGHVNRQEKEEKEAIYKERWPGYLRELRQRYSASTVDVVEMMDDEKVDLNL
IAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDKFIIIPLHSLMPTVNQT
QVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKA
NAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYF
LSRLMDPPSNEAVLLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCC
LDPVLTIAASLSFKDPFVIPLGKEKVADARRKELAKDTKSDHLTVVNAFKGWEKAKQRGF
RYEKDYCWEYFLSSNTLQMLHSMKGQFAEHLLGAGFVSSRNPQDPESNINSDNEKIIKAV
ICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGVVAIHPKSVNVEQTEFHYNWLIYHLKMRT
SSIYLYDCTEVSPYCLLFFGGDISIQKDNDQETIAVDEWIIFQSPARIAHLVKELRKELD
ILLQEKIESPHPVDWKDTKSRDCAVLSAIIDLIKTQETAAPRSLPPRFQDGSRS
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgagctatgactaccatcagaactggggccgcgatggtggcccccgcagctccggcggg
ggttacggaggaagctatggaggcaaccatggaggaggccatggggggagccgaggctct
ggaggtggtggcggcggcggcggcggcggagggggtggtcgaggcggccgaggccgacat
cccgggcacctgaaaggccgcgaaatcggcttatggtacgcgaagaaacaaggccagaag
aacaaggaagcagagaggcaggagagagctgtagtgcacatggacgaacgacgagaagag
caaatcgtgcagctgctgcattctgtgcaagcgaagaatgatagagacgaagaagcgcag
atatcctggtttgctcccgaagatcacggatacagtactgaagctcctgctgaaaacaaa
ccaaattcagtaaagaaagttgagcatcaggaaaaaaaaaagataaatcaagaaaagagg
ccatttagaatcagggacaaatacattgaccgtgattctgaatatctctttcaagaaaat
gaaccagatgcaattctagaccaacaattattggaagatttacaaaagaaaaaaactgac
cttcggtatattgaaatgcagcacttcagggaaaagctgccgtcgtatggaatgcaaaag
gaattggtaaatatgattgataatcatcaggtaacagtgataagtggtgaaaccggttgt
ggaaaaaccactcaagttactcagttcattttggataactacattgaaagaggaaaagga
tctgcttgtaggatagtttgtactcagccaagaagaattagtgccatttcagttgcagag
agagtggctgcagaaagggcagaatcttgtggcaatggtaatagtactggataccaaatt
cggctccagagtcggttgccaaggaaacaaggttctatcttatattgtacaacaggaatc
atccttcagtggcttcagtcagacccccatctgtccagtgttagccatattgtgcttgat
gaaatccatgagagaaatctacagtcagatgttttaatgactgttgttaaagatcttctc
agttttcgatctgacctgaaagtagtattgatgagtgcaacattgaatgctgagaaattt
tctgaatattttggtaactgtccaatgatacatatacctggctttacttttccggttgtg
gagtatcttttggaagatataattgaaaaaataagatatgttccagaacaaaaagaacac
agatcccagtttaagaaaggtttcatgcaagggcatgtgaatagacaagaaaaagaagaa
aaagaagcgatctataaagaacgctggccaggttatctaagggaattgagacaaaggtat
tctgcaagcactgtagatgttgtagaaatgatggatgatgaaaaagttgatctgaatttg
attgctgcccttattcgatacattgttttggaagaagaggatggtgcaatattggtcttt
ctaccaggctgggacaacatcagcacgttacatgatctcttgatgtcacaagtgatgttt
aaatcagacaagtttattattatacctttacattctctgatgcctacagttaaccagaca
caggtgtttaagagaactcctcctggtgttcggaaaatagttatcgctaccaacattgca
gagactagcatcaccattgatgatgtagtgtatgtaatagatggagggaaaataaaggag
acgcactttgacacacagaacaacatcagcacgatgtctgctgagtgggtgagcaaagcc
aacgccaagcagaggaaaggccgagctggaagagttcaacctggtcattgctatcatcta
tataacggtcttagagcaagccttctagatgactatcaactgccagaaattttaagaacg
cctttggaagaactttgtttacagataaagattttaagactaggtggaattgcttacttt
cttagtaggctaatggatccaccatcgaatgaagcagtgttactctccataaaacacctg
atggaactgaatgctttggataaacaagaagaattgacacctcttggagttcacttggca
cgattaccagttgagccacacattgggaaaatgattctttttggagctctgttctgttgc
ttagacccggtactcaccattgctgctagtctcagcttcaaagatccctttgtgattcca
ctgggaaaagaaaaggtcgcagatgcaagaagaaaggaattggcaaaggatactaaaagt
gaccacctgactgtcgtgaatgcatttaagggatgggaaaaagctaaacaacgtggtttc
agatatgaaaaagactattgctgggaatattttctatcttcaaacacattgcagatgctg
catagcatgaaagggcagtttgctgagcatcttcttggagctggatttgtaagcagtaga
aatcctcaagatccagagtctaatataaattcagataatgagaagataattaaagctgtc
atctgtgctggtttatatcccaaagttgctaaaatccgactaaatttgggtaaaaaaaga
aaaatggtgaaagtttacacaaaaactgatggagtagttgctattcatcctaaatctgtt
aatgtggagcaaacagagtttcactacaactggcttatctatcacctgaagatgaggaca
agtagtatatacttgtatgactgcacagaagtttccccatactgtctcttgttctttgga
ggtgatatatccatccagaaagataatgatcaggaaactattgctgtagatgagtggata
atctttcagtctccagcaagaattgcccaccttgttaaggaattaagaaaggaactagat
atccttctgcaagagaagattgaaagtccccatcccgtagactggaaggacactaagtcg
agagactgtgctgtgctctcggccattatagacttgatcaaaacacaggagacagcagct
cccaggagcctgccgccacgcttccaggacgggtctcgcagctga
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