KEGG   Cervus canadensis (wapiti): 122445071
Entry
122445071         CDS       T07554                                 
Symbol
HLTF
Name
(RefSeq) helicase-like transcription factor isoform X1
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
ccad  Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:ccad00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ccad04121]
    122445071 (HLTF)
   03400 DNA repair and recombination proteins [BR:ccad03400]
    122445071 (HLTF)
Enzymes [BR:ccad01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     122445071 (HLTF)
Ubiquitin system [BR:ccad04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    122445071 (HLTF)
DNA repair and recombination proteins [BR:ccad03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    122445071 (HLTF)
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4_2 zf-C3HC4 zf-C3HC4_3 DEAD zf-RING_2 zf-RING_UBOX RING_XB3-XBAT31 zf-RING_5 ResIII zf-C3HC4_4 zf-ANAPC11 HDA2-3 zf-Nse Prok-RING_4
Other DBs
NCBI-GeneID: 122445071
NCBI-ProteinID: XP_043329993
LinkDB
Position
7:91644027..91707827
AA seq 1010 aa
MSWMFKRDPVWKYLQTVQYGVHGNFPRLSYPTFFPRFEFQDIIPPDDFLTSDEELDSVLF
GTLRGHVVGLRYYTGVVNNNEMVALQREPNNPYDKNAIKVNNVNGNQVGHIKKDLAAALA
YIMDNKLAQIEGVVPFGANNTFTMPLQMTFWGKEENRKAVLDELKKHGFKLGPAPKSLGF
SLEGGWGSGRAGPSYSTPAHAAVQMTTEQLKTEFDKLFEDLKEDDKTQEMEPAEAIETPL
LPHQKQALAWMVSRENSEELPPFWEQRSDLYYNTITNFSEKDRPENVHGGILADDMGLGK
TLTAIAVILTNFHDGKSLPVERIKKNQLKKECNVYDESMELGGNNTSEKAAGLIKVEGSR
CSGEPGISDVKGKNKYPKSEFPSSRPKRRKPAVPYTESSDSEEVEPSELPQKMKGKLKRT
QSETKVRVKAGSSKVQEDAEFACALTSSTPATKKKMLKRGASAVESSKKTDVEDKPRTTL
IICPLSVLSNWMDQFGQHIKSDVHLNFYVYYGPDRVRDPTLLSKQDIVLTTYNILTHDYG
TKGDSPLHSIRWLRVILDEGHAIRNPNAQQTKAVLDLEAERRWVLTGTPIQNSLKDLWSL
LSFLKLKPFVDREWWHRTIQRPVTVGDEAGLRRLQSLIKNITLRRTKTSKIKGKPVLELP
ERKVFIQHITLSDEERKIYQSVKNEGRATIGRYFNEGTVLAHYADVLGLLLRLRQICCHT
HLLANAVSSSGPSGNDTPEELRKKLIKKMKLVLSSGSDEECAICLDSLMAPVITHCAHVF
CKPCICQVIQNEQPHAKCPLCRNDIHGDSLIECPPEELACDTEKKSNIEWTSSSKINALM
HALIDLRKKNPNIKSLVVSQFTTFLSLIETPLRASGFVFTRLDGSMAQKKRVESIQCFQN
TEAGSPTIMLLSLKAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITK
FIVKDSVEENMLKIQNTKRELAAGAFGTKKTNASEMKQAKINEIRTLIDL
NT seq 3033 nt   +upstreamnt  +downstreamnt
atgtcctggatgttcaagagagatcctgtttggaagtacttgcagactgtccagtatgga
gtccatggaaattttccacgcctctcatatccaactttctttcctcgttttgaatttcaa
gatattattcctccagatgacttcctaacaagtgatgaagagttagattcagttctgttt
ggaactttgagaggccatgtcgttggactgcgctattacacaggagtggttaataataat
gaaatggttgcattacaacgagaaccgaataacccctatgataagaatgcaattaaagta
aacaatgtgaatggaaatcaggttggtcatataaagaaagatcttgcagctgccttggcc
tatatcatggacaacaaactggcacaaattgaaggggtagttccttttggtgcaaacaat
acttttaccatgcctctgcaaatgacattttggggaaaagaagaaaatagaaaagcagtt
ttagatgagttaaagaaacatggatttaaattgggacctgcaccaaaatctttagggttc
agtttggaaggtggctggggctctggaagagctggaccgagctatagtacgccagctcat
gcggcggtacagatgaccactgaacagcttaagacagagtttgacaaactgtttgaagat
ttaaaagaagatgataaaactcaggaaatggaaccagctgaggctattgaaacaccattg
cttcctcatcaaaaacaagctttagcttggatggtttcacgggaaaacagtgaagaactt
ccaccattctgggaacagcgaagtgacttatactataacacaataacaaatttttctgaa
aaggaccgaccagaaaatgttcatggaggaattttagctgatgatatgggtttgggcaaa
actttgacagccattgcagtgattcttaccaacttccatgatggcaagtctcttcctgtt
gaaagaattaagaaaaatcaactgaagaaggaatgtaatgtttatgatgaatctatggaa
cttggaggaaacaataccagtgaaaaggcagctggactaatcaaagtggaaggatccaga
tgtagtggagaacctggtatttcagatgtcaagggaaagaataaatatccaaagtcagaa
ttccctagctcccgccccaaaaggagaaaacctgctgtaccgtacactgaaagtagtgat
tcagaggaagtggaaccaagtgaattgccacagaaaatgaaaggcaaactgaaaagaaca
caatcagagactaaagtcagagtgaaagcaggatcttctaaggttcaagaggatgcagag
tttgcttgcgcacttacttcatctacccctgcaacaaaaaagaaaatgttgaaaagggga
gcatctgcagtggagagttcaaagaaaactgatgttgaagataaaccaagaacaacactg
atcatctgtccactttctgtgttaagcaactggatggaccagtttggacaacacataaaa
tcagatgtgcacttgaatttttatgtttattatggtcctgatcgtgttagagacccaacc
ttgctttcaaaacaggatattgttttgactacatacaatattttaactcatgactatggt
actaagggtgatagtcctttacatagcataagatggctaagagtgatcctggatgaagga
catgccatacgaaatccaaatgctcagcaaacaaaagctgtacttgatttagaagcagaa
agaagatgggttttgacaggcactccaattcagaattctttaaaggacttgtggtctctt
ctttcctttttgaaactaaaaccatttgttgatagagagtggtggcacagaacgatacag
cgccctgtcacagtgggagatgaagctgggcttcggcgtttgcagtccctaattaaaaat
attacacttagaagaacaaagacaagcaaaattaaaggaaaacctgttttggagttacca
gaacgtaaagtatttattcagcacattacactttcagatgaagagagaaagatttaccag
tctgtgaaaaacgaaggcagagctactattgggaggtattttaatgaagggactgtcctt
gcacactatgcagatgtcctgggtcttttgcttagattgcggcaaatttgttgtcataca
caccttcttgcaaatgcagtgtcttccagtggtccgtcagggaatgatacacctgaagaa
ctacggaagaagctaataaagaagatgaagttagttctgagctcgggttctgatgaagaa
tgtgcaatctgcttggactccttaatggctcctgtcataacacattgtgcacatgtcttc
tgcaagccttgtatctgccaggtcattcagaatgagcagccgcacgctaaatgccctctc
tgcagaaatgacatacatggagacagcttaatagagtgtcctccagaagagctggcatgc
gacactgagaaaaagtccaatatcgaatggacatccagttcgaagattaatgctctgatg
catgcattgattgatttaagaaagaagaaccccaacataaaaagtttagttgtttctcag
tttacaacatttctgtctttaatagaaacacccctcagagcctctggatttgtatttact
cgtttggatggttccatggcccaaaaaaaaagagttgaatcaattcagtgttttcaaaac
actgaagcagggtctccaactataatgcttctatccttaaaagcaggtggagttggcttg
aatctttctgcagcttctcgagtttttttaatggatccagcctggaatccagctgctgaa
gatcagtgctttgacagatgccatagacttggccagaagcaagaagttattatcacaaaa
ttcattgtgaaggattctgttgaagaaaacatgctgaaaatacaaaacacgaagagagaa
cttgcagctggagcctttggaactaagaaaacaaatgctagtgaaatgaaacaagctaaa
atcaatgaaatcagaactttaattgatttataa

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