Cervus canadensis (wapiti): 122445240
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Entry
122445240 CDS
T07554
Symbol
TRPC1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04360
Axon guidance
ccad04724
Glutamatergic synapse
ccad04726
Serotonergic synapse
ccad04929
GnRH secretion
ccad04972
Pancreatic secretion
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
122445240 (TRPC1)
09154 Digestive system
04972 Pancreatic secretion
122445240 (TRPC1)
09156 Nervous system
04724 Glutamatergic synapse
122445240 (TRPC1)
04726 Serotonergic synapse
122445240 (TRPC1)
09158 Development and regeneration
04360 Axon guidance
122445240 (TRPC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccad04040
]
122445240 (TRPC1)
Ion channels [BR:
ccad04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
122445240 (TRPC1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
LHD_TRPY1
MTR4-like_stalk
RIN1
Motif
Other DBs
NCBI-GeneID:
122445240
NCBI-ProteinID:
XP_043330126
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Position
7:complement(4041797..4100919)
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AA seq
772 aa
AA seq
DB search
MMAALYPSTDLSGASSSSLPSSPSSSSSPNEVMALKDVREVKEENTLNEKLFLLACDKGD
YYMVKKILEENSSGDLNINCVDVLGRNAVTITIENENLDILQLLLDYGCQKLMERIQNPE
YSTTMDVAPVILAAHRNNYEILTMLLKQDVSLPKPHAVGCECTLCSAKNKKDSLRHSRFR
LDIYRCLASPALIMLTEEDPILRAFELSADLKELSLVEVEFRNDYEELARQCKMFAKDLL
AQARNSRELEVILNHTSSDEPLDKRGLLEERMNLSRLKLAIKYNQKEFVSQSNCQQFLNT
VWFGQMSGYRRKPTCKKIMTVLTVGIFWPVLSLCYLIAPKSQFGRIIHTPFMKFIIHGAS
YFTFLLLLNLYSLVYNEDKKNTMGPALERIDYLLILWIIGMIWSDIKRLWYEGLEDFLEE
SRNQLSFVMNSLYLATFALKVVAHNKFHDFADRKDWDAFHPTLVAEGLFAFANVLSYLRL
FFMYTTSSILGPLQMILMNTYVIFPQISMGQMLQDFGKFLGMFLLVLFSFTIGLTQLYDK
GYTPKEQKDCVGIFCEQQSNDTFHSFIGTCFALFWYIFSLAHVAIFVTRFSYGEELQSFV
GAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKEWKFARAKLWLSYFDDKCTLPPP
FNIIPSPKTICYMISSLSKWICSHTSKGKVKRQNSLKEWRNLKQKRDENYQKVMCCLVHR
YLTSMRQKMQSTDQATVENLNELRQDLSKFRNEIRDLLGFRTSKYAMFYPRN
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggccctgtacccgagcacggacctctcgggcgcctcctcctcctccctgcct
tcttccccatcctcctcttcgtcgccaaacgaggtgatggcgctgaaggatgtgcgggag
gtgaaggaggagaacaccctgaatgagaagcttttcttgctggcgtgcgacaagggtgac
tattatatggttaaaaagattttggaggaaaacagttcaggtgacttgaacataaattgc
gtagatgtgcttgggagaaatgctgttaccataactattgaaaacgaaaacttggatata
ctgcagcttcttttggactacggttgtcagaaactaatggagagaattcagaatcctgag
tattcaacaactatggatgttgcacctgtcattttagctgctcatcgtaacaactatgaa
attcttacaatgctgttaaaacaggatgtatctctacctaagccccatgcagttggctgt
gaatgtacattgtgttctgcaaaaaacaaaaaggacagcctccgacattccaggtttcgt
cttgatatatatcgctgcttggccagtccagctctaataatgttaacagaggaggatcct
attctgagagcgtttgaacttagtgctgatttaaaagaactaagcctcgtggaggtggaa
ttcaggaatgattatgaggaactagcccggcagtgtaaaatgtttgctaaagatttgctt
gcccaagcccggaattcacgtgaattagaagttatcctaaaccatacatccagtgatgag
cctcttgacaaacgaggattactagaagaaagaatgaacttaagtcgtctaaaacttgct
atcaaatataaccaaaaggagtttgtttcccagtccaactgtcagcagttcctgaacact
gtttggtttggacagatgtcaggttaccgtcgtaagcctacctgtaagaagataatgact
gttttgacagttggcatcttttggccagttttgtcactttgttatttgatagctcccaaa
tctcagtttggcagaattatccacacaccttttatgaaatttattattcatggagcatca
tatttcacattcctactgttactaaacctatactctcttgtctacaatgaggataagaaa
aacacaatggggccagcccttgaaagaatagactatctccttatactgtggattattgga
atgatatggtcagacattaaaagactctggtatgaagggttggaagactttttagaagaa
tctcgtaatcagctcagttttgtcatgaattcactttatttggcaacctttgccctcaaa
gtggttgctcacaacaagtttcatgattttgcggatcggaaggactgggatgcattccac
cctacactggtggcagagggactttttgcatttgccaacgttctgagttatcttcgtctc
ttttttatgtataccacaagctctatcttgggtccattacagatgattttaatgaacacc
tatgtaatatttccacagatttcaatgggacagatgttacaagattttggaaaatttctt
ggaatgtttcttcttgttttgttttctttcacaattgggctgacacaactgtatgataaa
ggctacactccaaaagaacagaaggactgtgtaggcatattctgtgaacagcaaagcaat
gataccttccattcgttcatcggcacttgctttgctttgttctggtatattttctcctta
gcacatgtggcaatctttgtcacaagatttagctatggagaagaattacagtccttcgtc
ggagctgttattgttgggacatacaatgttgtggttgtgatagtccttaccaagctgctg
gtggcaatgcttcataaaagttttcagttgatagcaaatcatgaagacaaagaatggaag
tttgctcgagcaaaactgtggcttagctactttgatgacaaatgtacattacccccacct
ttcaacatcatcccttcgccaaagactatctgctatatgattagtagcctgagtaagtgg
atttgctctcatacatcaaaaggcaaagttaaacggcagaacagcttgaaggaatggaga
aatttgaaacaaaagagagatgaaaactaccaaaaagtgatgtgctgtctagtgcatcgt
tacttgacttccatgagacaaaagatgcaaagtacagatcaggcaactgtggaaaatcta
aatgaactgcgccaagatctgtcaaaattccgaaatgaaataagggatttacttggcttt
cggacttctaaatatgctatgttttatccaagaaattag
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