Cervus canadensis (wapiti): 122445327
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Entry
122445327 CDS
T07554
Symbol
NPHP3
Name
(RefSeq) nephrocystin-3 isoform X1
KO
K19360
nephrocystin-3
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccad03037
]
122445327 (NPHP3)
Cilium and associated proteins [BR:
ccad03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
122445327 (NPHP3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_12
NPHP3_hel
NPHP3
TPR_10
TPR_1
TPR_8
TPR_7
TPR_2
TPR_MalT
TPR_16
TPR_19
TPR_17
TPR_14
TPR_11
NPHP3_N
TPR_3
AAA_16
NACHT
KAP_NTPase
AAA_22
DUF2225
TPR_6
AAA_19
ARM_TT21_4th
MIT
14-3-3
AAA_14
TPR_CcmH_CycH
T2SSE
Viral_helicase1
FliD_C
TPR-S
Motif
Other DBs
NCBI-GeneID:
122445327
NCBI-ProteinID:
XP_043330330
LinkDB
All DBs
Position
7:14521237..14577970
Genome browser
AA seq
1337 aa
AA seq
DB search
MGTASSLVSPAGGEVIEDTYGAGGGEACEIPVEVKPKARLLRSSFRRAAGVAAAGAGPGS
LPRGAGGGGLLGASFKSTGSSVPELEYAAAEYERLKKEYEIFRVSKNQELLSMGRREAKL
DTENKRLRAELQALQKTYQKILREKESALEAKYQAMERAATFEHDRDKVKRQFKIFRETK
ENEIQDLLRAKRELESKLQRLQAQGIHVFDPGESDSDDNCTDVTDEICFTAAGTQCEYWT
GGALGSEPSIGSMIQLQQSFRGPEFAHSSIDVEGPFANVNRDDWDIAVASLLQVTPLFSH
SLWSNTVRCYLIHTDETQPEMDLFLKDYSPKLKRMCETMGYFFHAVYFPIDIENQYLAVR
KWEIEKSSLVILFIHLTLPSLLLEDCEEAFLKNPEGKPRLIYHRLEDGKVSSDSVQQLID
QVSNLNKTSKAKIIDHLGDPAEGVYKTYIYVEKIIKQDILGFENTDLDTKDLGSEDSIPE
EDDFGDVLWDIHDEQEQMEAFQQASNSAHELGFEKYYQRLNDLVAAPAPIPPLLVSGGPG
SGKSLLLSKWIQLQQKNSPNTLILSHFVGRPMSTSSEASLIIKRLTLKLMQHSWSVSALT
LDPAKLLEEFPRWLEKLSARHQGSIIIIIDSIDQIQQVEKHMKWLIDPLPVNVRVIVSVN
VETCPPAWRLWPTLHLDPLNPKDAKSIIIAECHSVDIKLSKEQEKKLERHCRSATTCNAL
YVTLFGKMIARAGRAGNLDKILLQCFQCQDTVSLYRLVLRSIQESMANDTDKELMKQILC
LVNISHNGVNESELMELYPEMSWTVLTSLIYSLHKMCLLTYGCGLLKFQHLQAWETVRLE
YMEGPTIIAAYRQKLTNYFTMQLSQDRVTWRSADELPWLFQQQGSKQKLHDCLLNLFVSQ
NLYKRGHFAELLSYWQFVGKDKSAMAAEYFDSLKQYEKTCEGEESMVCLADLYETLGRFL
KDLGLLSQAVVPLQRSLEIRETALDPDHPQVAQSLHQLASVYVQWKKFGNAEQLYKQALE
ISENAYGSDHPHIARELEALATLYQKQDKYEQAEHFRKKSFKIRQKAARRKGNLYGFSLL
RRRALQLEELTLGKDTPDNARTLNELGVLYYLQNNLETAEQFLKRSLEMRERVLGPDHPD
CAQSLNNLAALCNEKKQYDKAEELYERALDIRRRALAPDHPSLAYTVKHLAILYKKMGKL
DKAVPLYELAVEIRQKSFGPKHPSVATALVNLAVLYSQMKKHSEALPLYERALKIYEDSL
GQMHPRVGETLKNLAVLSYEEGDFEKAAELYKRAMEIKEAETSLLGGKAPSQHSSSGDTF
SLKTTHSPNLFLHQGQR
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atgggtacggcttcgtcgctcgtgagccccgcgggcggggaggtgatcgaggacacgtac
ggggcgggcggcggcgaggcctgtgagatcccggtggaggtgaagcccaaggcccgcttg
ctgcgcagctcgttccgccgggccgcgggtgtggcggctgcgggagccgggccgggttcg
ctgccccgtggagcgggcggcggcgggctgctaggggccagcttcaagtctactggttcg
tcggtgcccgagctggaatacgcggctgctgagtacgagcggctaaagaaggagtacgag
atcttccgggtcagcaagaaccaggagttgttatccatgggccgccgggaggccaagctg
gacacggagaacaagcggctgcgggccgagctgcaggcacttcaaaaaacttaccagaag
atacttcgggaaaaggaaagtgctttagaagcaaaataccaagcaatggagagagcagct
acatttgaacatgacagagataaagttaagaggcaatttaagatttttagggagaccaaa
gaaaatgaaattcaggatttattgagggccaagagagagttggagagcaaacttcagagg
ctacaggctcaggggatccatgtatttgatcctggagagtctgattcagatgacaactgt
acagatgttactgatgaaatctgctttacagctgctggaacccagtgtgaatattggact
ggtggagccttgggaagtgagccttctatagggagcatgatccagcttcagcaatccttc
cggggccctgagttcgcccacagttctatagacgtggaaggaccctttgctaatgtcaac
agagatgactgggatattgctgtggctagtttattacaagttacccccttgttttcacat
tctctatggagtaacactgtcagatgttacctcattcatacagatgaaacccagcctgaa
atggatcttttccttaaggattactcacctaaacttaagagaatgtgtgagacaatggga
tattttttccatgctgtgtattttccaatagatattgaaaatcaatacctcgctgtaaga
aaatgggaaattgagaaaagttcattagttatcttattcattcatttaaccttaccaagc
cttttattggaagactgtgaagaagcttttctgaaaaaccccgaaggcaaaccacgatta
atttatcatcgtttggaggatgggaaagtcagttctgactctgtccagcaactgattgat
caagtttctaacctgaacaagaccagcaaagccaagatcattgatcacttgggagatcct
gcagaaggagtctataaaacctatatttatgtggaaaagattattaaacaggacatcctg
ggctttgaaaacacagacctggacaccaaggatttgggcagtgaagattctattccagaa
gaagatgattttggtgatgttctatgggacatacatgatgaacaagagcaaatggaagct
tttcagcaagcttcaaattcagcccatgagttgggattcgagaaatactaccagcgcctt
aatgatcttgtggcagcaccagcaccaattccaccccttcttgtatctggaggaccaggc
tctggaaagtcccttcttttatcaaagtggatccaattacaacagaagaattcccctaac
acactaattctttctcattttgtggggagacccatgtcaaccagctcagaggcttccttg
attattaaacgactgactctaaagttgatgcagcattcttggtcagtatctgctctgaca
ttggatcctgccaagcttttggaagaatttccacgttggctggaaaaactctctgcccgt
catcaaggcagcatcatcatcattattgattctatagatcaaattcagcaagttgaaaaa
cacatgaaatggctgatagatccactgcctgtgaatgtaagagtaattgtttctgtgaat
gtagaaacatgccctccagcatggaggctgtggcctacacttcatcttgaccctttaaat
ccaaaagatgcaaaatctattataattgcagaatgccactctgtagacattaaattgagt
aaagagcaggagaagaagctagaacgacactgtcgttctgctacaacctgcaatgctctt
tacgtcactcttttcggcaaaatgattgcacgtgctgggagagcaggcaatttagataaa
atccttcttcagtgtttccagtgtcaagatactgtttcattatataggcttgttctgcga
tctatccaggagtccatggcaaatgatacagataaagaactaatgaaacagattctctgc
cttgtaaatattagtcacaatggtgtgaatgagtcagaattgatggaactctatcctgag
atgtcctggactgtcttgacctcccttatttacagtttacacaaaatgtgtttgttgact
tatggttgtggtttgctcaagtttcaacatctacaggcttgggaaacagtgagactagaa
tacatggaaggtcccaccattattgctgcatatagacaaaagctaactaattattttacc
atgcagctaagtcaggaccgagtgacttggaggagtgcagatgaactgccttggcttttc
cagcagcagggaagtaaacagaagctgcatgattgtcttcttaacctctttgtgtctcaa
aacctctataaaagaggacactttgctgagttgctgagttattggcagtttgttggcaaa
gacaaaagcgcgatggcagcagaatactttgattcattgaagcagtatgagaaaacctgt
gaaggtgaagagagcatggtttgcttagctgacctttatgaaaccctggggcgatttctc
aaggatctaggccttctcagtcaggctgttgtgcctttgcagaggtctctggagattcga
gaaacagctttagatccagatcacccacaagtagctcagtctctccaccagctcgcaagt
gtgtatgtgcagtggaagaagtttggcaatgcagaacaactgtataaacaggcattggaa
atctcagaaaatgcctatggttcagaccatccacatattgctcgcgaacttgaggcactt
gcaactttgtaccagaaacaagataaatatgaacaagctgaacattttaggaaaaaatcg
tttaaaattcgtcagaaagctgcaaggagaaaaggcaacttgtatggattttccctttta
cgtagacgggccctacaattagaagagctcacgttaggtaaggatacacctgacaatgct
cggaccctcaatgaactgggtgtgctctactatcttcagaacaacctggaaacagctgag
cagtttctgaagcgttccttggagatgagggagagagttctaggaccagatcaccctgac
tgtgcccagtctttgaataatctggcggctctatgcaatgaaaagaaacagtatgacaaa
gcagaagaactttatgaaagagccttagacattcggagacgagcattagctcctgatcac
ccttctttggcttatacggtaaagcatcttgcgatcttatacaagaaaatgggtaaactt
gacaaagctgtacctttgtatgagctggctgttgaaatccggcagaaatcctttggcccg
aagcacccaagtgtagctactgccttggtgaacttagctgttctttatagccaaatgaaa
aaacacagtgaggccttgccgttatatgaacgagcattaaagatttacgaggacagcctg
ggtcagatgcatcctcgagttggagaaacactaaaaaatttagctgtgcttagctatgaa
gaaggggattttgaaaaagctgctgaactatacaaaagggcaatggaaataaaagaagca
gaaacgtcacttttgggtggaaaagctccttcccaacactcatcaagtggagatacattt
agcttaaaaacaacccattctcctaatcttttccttcatcaaggacaaaggtga
DBGET
integrated database retrieval system
