Cervus canadensis (wapiti): 122445442
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Entry
122445442 CDS
T07554
Symbol
COL6A2
Name
(RefSeq) collagen alpha-2(VI) chain isoform X1
KO
K06238
collagen type VI alpha
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04151
PI3K-Akt signaling pathway
ccad04510
Focal adhesion
ccad04512
ECM-receptor interaction
ccad04820
Cytoskeleton in muscle cells
ccad04974
Protein digestion and absorption
ccad05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
122445442 (COL6A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122445442 (COL6A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122445442 (COL6A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
122445442 (COL6A2)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
122445442 (COL6A2)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
122445442 (COL6A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccad04147
]
122445442 (COL6A2)
00536 Glycosaminoglycan binding proteins [BR:
ccad00536
]
122445442 (COL6A2)
Exosome [BR:
ccad04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122445442 (COL6A2)
Glycosaminoglycan binding proteins [BR:
ccad00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
122445442 (COL6A2)
Hyaluronan
Extracellular matrix or blood plasma proteins
122445442 (COL6A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Motif
Other DBs
NCBI-GeneID:
122445442
NCBI-ProteinID:
XP_043330564
LinkDB
All DBs
Position
7:23200074..23231050
Genome browser
AA seq
1027 aa
AA seq
DB search
MLRRKGAAKMLRSPCSALLLWGLLGAVHAQQQEVISPGTSDRNSCPEKADCPIHVYFVLD
TSESITMQSPTDSLLYHMQQFVLQFISQLQDELYLDQVALSWRYGGLHFSDLVEVFSPPG
SDRASFTKSLQSISSFRRGTFTDCMLGNMTQEVRRHVGKGVVNFAVVITDGHVTGSPCGG
IKLQAERAREEGIRLFAVPPNLKLNEQGLRDIANTPHELYRNNYATMRPDSTEIDQDTIN
RIIKVMKHEAYGECYKVSCLEIPGPPGPKGYRGQKGAKGNMGEPGEPGQKGRQGDPGIEG
PIGFPGPKGVPGFKGEKGEFGADGRKGAPGLAGKNGTDGQKGKLGRIGPPGCKGDTGDRG
PDGYVGEAGSPGERGDQGSKGDPGRPGRRGPPGENGAKGSKGYQGNNGAPGSPGLKGAKG
GPGPRGPKGEPGRRGDPGTKGSPGGDGPKGEKGDPGPEGPRGLAGEVGNKGAKGDRGLPG
PRGPQGTVGEPGKQGSRGDPGDAGPRGESGQPGPKGDPGRPGFSYPGPRGAPGDKGEPGP
PGPEGGRGDFGFKGEPGRKGQKGEPADPGPPGEPGPRGQKGAPGPEGEPGPPGDPGLTEC
DVMTYVRETCGCCDCEKRCGALDVVFVIDSSESIGYTNFTLEKNFVINVVNRLGAIAKDP
KSETGTRVGVVQYSHEGTFEAIQLDDERIDSLSSFKEAVKNLEWIAGGTWTPSALKFAYN
KLIKESRRQKTRVFAVVITDGRHDPRDDDLNLRALCNHEVTVTAIGIGDMFHEKHESENL
YSIACDKPQQVRNMTLFSDLVAEKFIDDMEDVLCPDPQIVCPDLPCQTELYVAQCTQRPV
DIVFLLDGSERLGEQNFHKARRFVEEVSRRLTLARRDDDPLNARVALLQFGGPREQQVAF
PLTFNLTVIQEALASARYLNSFSHVGAGIVQAINQVVQGARAGARRHAELSFVFLTDGVT
GNDSLDEAVHSMRKQNVVPTVVAVGSDVDADVLSKISLGDPAAVFREKDYDSLAQPGFFD
RFIRWIC
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgttgaggcgcaagggtgctgccaagatgcttcgcagcccctgctccgccctcctgctc
tgggggctcctgggggccgtccatgctcagcagcaggaggtcatcagccccggcacctcg
gacaggaatagctgcccagagaaggccgactgcccgatccacgtgtacttcgtgctggac
acatcagagagcatcaccatgcagtcccccaccgacagcctgctctaccacatgcagcag
ttcgtgctgcagttcatcagtcaactgcaggatgagctctacctggaccaggtggccctg
agctggcgctacggcggcctgcacttctccgatctggtagaggtgttcagcccgccgggt
agcgaccgggcctccttcaccaagagcctacagagcatcagctcctttcgccggggcacc
ttcaccgactgcatgctgggcaacatgacccaggaggtccggcggcacgtgggcaagggc
gtggtcaactttgcggtagtcatcaccgacggtcacgtgaccggcagcccgtgcgggggc
atcaagctgcaggcggagcgggcccgcgaggagggcatccggctgttcgcagtgccgccc
aacctcaagctgaatgagcagggcctgcgggacatcgccaacacaccacacgaactctac
cggaacaactacgcgacaatgcggccggactccactgagattgaccaggacaccatcaac
cgcatcatcaaggtcatgaaacatgaagcctatggagagtgctacaaggtcagctgtctg
gagatccctgggccccctggccccaagggctaccgcggacagaagggcgccaaaggcaac
atgggtgagcccggagagcctggacagaaggggcgacagggagatccaggcatcgaaggc
cccattggattccctggacccaagggtgttcctggtttcaaaggcgagaagggcgagttt
ggagccgacgggcggaagggtgcccctggcctggcgggcaagaacgggacagatgggcag
aagggcaagctggggcgcatcggacctcctggctgcaagggagacaccggggatcggggc
cccgatggctacgtgggggaagccggcagccctggggagcgaggagaccaaggctcgaag
ggggaccctggccgcccaggacgcagaggccccccaggggagaatggggcaaaaggaagc
aagggctatcaaggcaacaacggagccccaggaagtcctggcctgaaaggagccaagggt
gggcctgggccccgaggacccaaaggcgagcctgggcgcaggggagaccctggaaccaag
ggcagcccaggcggcgatggccccaagggtgagaagggggaccctggtcctgaggggccc
cggggcctggctggagaggttggcaacaaaggagccaagggagatcgcggtttgcctgga
cccagaggtccccaggggactgtcggagagcctgggaaacaaggatctcggggagaccct
ggtgatgctggtccccgtggagaatcgggacagcctggccccaagggagaccctggcagg
cctggattcagctaccccggaccccgaggagcacctggagacaagggtgagccgggcccc
cccggccccgaggggggcagaggtgactttggcttcaaaggagaacctgggaggaaaggc
cagaagggagagcccgcagatcctggtccccctggtgagcctggcccacgggggcagaag
ggagccccaggacccgagggagagcctggccccccaggagaccccggcctcacggaatgc
gacgtcatgacctacgtgcgggagacctgcgggtgctgtgactgtgagaagcgctgtggc
gccttagacgtggtgttcgtcatcgacagctccgagagcattggctacaccaacttcacc
ctggagaagaacttcgtcatcaacgtggtcaacaggctgggggccatcgccaaggacccc
aagtcggagacggggacccgcgtgggcgtcgtgcagtacagtcacgagggcaccttcgaa
gccatccagctggacgacgagcgcatcgactcgctgtccagcttcaaggaggccgtcaag
aaccttgagtggatcgctggcggcacctggacgccctcggccctcaagttcgcctacaac
aagctcatcaaggagagccggcgccagaagacccgcgtgttcgcggtggtcatcacagac
ggccgccatgacccccgggacgacgacctcaacctgcgggcgctgtgcaaccacgaagtg
acggtgacggccatcggcatcggggacatgttccacgagaagcacgagagcgagaacctg
tactccattgcctgcgacaagccgcagcaggtacgcaacatgacgctcttctccgacctg
gtggccgagaagttcatcgacgacatggaggacgtgctgtgcccggatccccagatcgtg
tgcccggatcttccctgccaaacagagctgtacgtggcccagtgcacacagcggccggtg
gacatcgtcttcttgctggacggctctgagcggctgggcgagcagaacttccacaaggcg
cggcgcttcgtggaggaggtgtcccgacggctgaccctggcgcgcagggacgacgaccca
ctcaacgcgcgcgtggcactgctgcagttcgggggcccgcgtgagcagcaagtggccttc
ccactgaccttcaacctgaccgtcattcaggaggcgctggcgagcgcgcgctacctcaac
tccttctctcacgtgggcgcgggcatcgtgcaggccatcaaccaggtggtgcaaggcgct
cgggctggggcgcgccgccacgcggagctgtccttcgtgttcctcacagacggcgtcaca
ggcaacgacagcctggacgaggcggtacactccatgcgcaagcagaacgtggtgcccacc
gtggtggccgtgggtagcgacgtggacgcggacgtgctctccaagatcagcctgggcgac
ccggccgccgtcttccgcgagaaagactatgacagcctggcccagcccggcttcttcgac
aggttcatccgctggatctgctag
DBGET
integrated database retrieval system
