KEGG   Cervus canadensis (wapiti): 122445495
Entry
122445495         CDS       T07554                                 
Symbol
TRIM42
Name
(RefSeq) tripartite motif-containing protein 42
  KO
K12018  tripartite motif-containing protein 42
Organism
ccad  Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:ccad00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ccad01009]
    122445495 (TRIM42)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ccad04121]
    122445495 (TRIM42)
Protein phosphatases and associated proteins [BR:ccad01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     122445495 (TRIM42)
Ubiquitin system [BR:ccad04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    122445495 (TRIM42)
SSDB
Motif
Pfam: zf-B_box fn3 Pur_ac_phosph_N Ig_DSCAM-DSCAML_C CHDCT2
Other DBs
NCBI-GeneID: 122445495
NCBI-ProteinID: XP_043330686
LinkDB
Position
7:complement(5948846..5975141)
AA seq 724 aa
MDTAMCVCSPCCTWQRCCPRLCSCLCCKFLFTSERNCTCLPCPYKDERNCQCCHCTCSEN
PNCHWCCCSWANDPNCKCCCTASSNLKCYYYESRCCRNATITFRKGRLRSIRTSSKTALH
IGSSDTQLEEAKMPTANSNLVSHLSCPICGRLRLHSFMLPCHHSLCEKCLRRLQKHAEVT
ENFFIVICPVCSRSHCMPYSHKMQLPENYLRGRLTKRYMQEHGYLKWRFDRSSGPIVCQV
CRSQRIAYKRCLTCRLNLCNECLKTFHSDVAMQDHVFVDTSTEDQDEKICIHHPSSRIIE
YCRNDNELLCGFCKTSLHSGHDTISLIDACSERAAALFSAIAKFKAVRYEIDNDLMEFNI
LKNSFKADKEVKRKEIRNGFLKLRSILQEKEKTIMEQIENLEVSRQKEIEKYVYVTTMKV
NEMDGLIAYSKEALKETGQVAFLQSAKILVDQIEDGIQSTYRPDPQLRLHSLNCMPLDFV
ELSSAIHELFPTGPKKVCSSGDSLPSPYPLHSEMMIARKVTFSTHSFDNQQIYQRSSSLL
SFNAPACEKTKIGLEAYGRAQSAAPAKPTDGLYTYWSAGVENQPVQNSNSFHNWYSFNDS
SVQTPGPIVIYQTLVYPRAAKVYWTCPTEDVDSFEMEFYELITSPPNNVRTELCGQIRDI
MQQNLELHNLTPNTEYLFKVRAINDNGPGQWSDICKVATPDGRGKNRAKWGLLKNIQTAL
QKRF
NT seq 2175 nt   +upstreamnt  +downstreamnt
atggataccgccatgtgcgtttgctctccgtgttgtacatggcagagatgctgtccgcgg
ctgtgctcctgcctgtgctgcaagttcctcttcacctcggagcgcaactgcacctgcctg
ccctgcccgtacaaagacgagcgcaactgccagtgctgccactgcacctgctccgagaac
cccaactgccactggtgctgctgctcctgggccaacgaccccaactgcaagtgctgctgc
acggccagcagcaacctcaagtgctactactacgagagccgctgctgccgcaatgccacc
atcaccttccgcaagggccgcctccggagcatccgcacctcctccaagacggcgctgcac
atcgggagcagcgacacgcagctggaggaggccaagatgccgacggccaacagcaacctg
gtcagccacctgtcgtgccccatctgtggccgcctgcgcctgcactccttcatgctgccc
tgccaccacagcctgtgtgagaagtgcctgcggcggctgcagaagcacgccgaggtcacc
gagaacttcttcatcgtcatctgcccggtgtgcagccgctcacactgcatgccctacagc
cacaagatgcagctgcccgagaactacctgcgcggccgcctcaccaagcgctacatgcag
gagcacggctacctcaagtggcgcttcgaccgctccagcgggcccatcgtctgccaggtc
tgccgcagccagcgcatcgcctacaagcgctgcctcacctgccgcctcaacctctgcaac
gagtgcctcaagactttccactcggacgtggccatgcaggaccacgtgttcgtggacacc
agcacggaggaccaggacgagaagatctgcatccaccacccgtccagccgcatcatcgag
tactgccgcaacgacaacgagctgctctgcggcttctgtaagacctccctccacagcggc
cacgacaccatcagcctcatcgacgcctgctcagagagggccgccgcgctcttcagcgcc
atcgccaagttcaaagcagtccgctatgaaattgataatgacctcatggaattcaatatt
ttaaaaaacagctttaaagctgacaaggaggtaaagcgaaaagagatcagaaatggattt
ctcaagctgcgcagcattctccaggagaaagagaaaaccatcatggagcagatagagaat
ctggaggtgtccaggcagaaggagattgaaaagtatgtgtatgtcactaccatgaaggtg
aacgaaatggatggcctgattgcctactccaaggaggcgctgaaggagacaggccaagtg
gcattcctgcagtcagccaagatcctggtggaccagatagaggatggcatccagagcact
tacaggcccgacccacagctccggctacactccttgaactgcatgcccttggacttcgtt
gagctctctagtgccattcacgagctcttccccacaggacccaagaaggtatgttcctcc
ggggactccctgccgtccccctaccctctgcactcagaaatgatgatcgccaggaaggtc
actttcagcacccacagcttcgacaaccagcagatataccagcgaagctcctccttattg
tccttcaatgcccctgcctgtgagaagaccaagataggtctggaggcctatgggcgagcc
cagtcagctgcacctgccaagcccacagacggcctctacacctactggagcgcaggggta
gaaaaccagcctgtgcagaatagcaatagcttccacaactggtactcattcaacgatagc
tctgtgcagactccaggcccaattgttatctaccagactctggtgtatccaagagctgcc
aaggtttactggacatgcccaacagaagacgtggactcttttgagatggaattctacgaa
ctcattacttcccctcctaacaatgtgcggacagagctctgtggacaaattcgggacata
atgcagcagaatctggagctacacaacctgacccccaacaccgagtatctgtttaaagtg
cgagccatcaatgataacggtcccgggcaatggagtgacatttgcaaggtggcaacacca
gatgggcgtggaaagaaccgagctaagtggggcctgctgaagaatatccagactgccctc
cagaaacgcttctga

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