KEGG   Cervus canadensis (wapiti): 122445538
Entry
122445538         CDS       T07554                                 
Symbol
PER1
Name
(RefSeq) period circadian protein homolog 1 isoform X1
  KO
K21944  period circadian protein 1
Organism
ccad  Cervus canadensis (wapiti)
Pathway
ccad04710  Circadian rhythm
ccad04713  Circadian entrainment
Brite
KEGG Orthology (KO) [BR:ccad00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    122445538 (PER1)
   04713 Circadian entrainment
    122445538 (PER1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccad03400]
    122445538 (PER1)
DNA repair and recombination proteins [BR:ccad03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    122445538 (PER1)
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 122445538
NCBI-ProteinID: XP_043330765
LinkDB
Position
1:32777426..32792131
AA seq 1285 aa
MSRSGPLEGADGGGDLRPGEPFCPGGGPSPGPPEHRPCPGPSLADDTDANSNGSSGNESN
GPESRGASQRSSHSSSSGNGKDSALLETTESSKSTNSQSPSPPSSSIAYSLLSASSEPDN
PSTSGCSSEQSARARTQKELMTALRELKLRLPPERRGKGRSGTLATLQYALACVKQVQAN
QEFYQQWSLEEGEPCAMDMSTYTLEELEHVTSEYTLRNQDTFSVAVSFLTGRIVYISEQA
GVLLRCKRDVFRGARFSELLAPQDVGVFYSSTTPSRLPTWGPGASSGSGLKDFTQEKSVF
CRIRGGPDRDPGPRYQPFRLTPYVTKIRVSDGAPAQPCCLLIAERIHSGYEAPRIPPDKR
IFTTRHTPSCLFQDVDERAAPLLGYLPQDLLGAPVLLFLHPEDRPLMLAIHKKILQLAGQ
PFDHSPIRFCARNGEYVTMDTSWAGFVHPWSRKVAFVLGRHKVRTAPLNEDVFTPPAPSP
ALSLDSDIQELSEQIHRLLLQPVHSPSPTGFCGVGPVPSSGPLLSPGSSSESNGGDAEGP
GPPAPVTFQQICKDVHLVKHQGQQLFIESRARPLPRPRVPSTGTFKAKTLPCQSPDLEAA
PAPIQAPLALAIEEAERKEASSCSYQQINCLDSILRYLESCNLPGTTKRKCASSSSCTAS
SASDDDKQRTGPVSVGAKKDASAVLPGEGAAPLKEPVAGGGALSPLALANKAESVVSVTS
QCSFSSTIVHVGDKKPPESDIIMMEDVPSLPPGPAPSPAPSPTVAPEPAPDAYRPVGLTK
AVLSLHTQKEEQAFLSRFRDFSRLRGLDSSSTAPSAPGERGCHHSPATHGRRHHCRSKAK
RSRHHQTARAEAPGYISQPSPVPPSAPWPPPPATPPFPAVVQPYPLPVFPARGGPQPLPP
APTSVPPAAFPAPLVTPMVALVLPNYLFPTPSTYPYGAPQTPAEGPPTPASRSPSPSLPP
LPPSPPHHPDSPLFNSRCSSPLQLNLLQLEEPPRGEGGAAAGGSGSSAGPPPPSEAEPEA
RLAEVTESSNQDALSGSSDLLELLLQEDSRSGTGSAASGSLGSGLGSGSGSHEGGSTSAS
ITRSSQSSHTSKYFGSIDSSEAEAGAAQARAEPGDQVIKYVLQDPIWLLMANADQRVMMT
YQVPSRDMASVLKQDRERLRAMQKQQPRFSEDQRRELGAVHSWVRKGQLPRALDVMACVD
CGSSTQEHGHPDDPLFSEVDGLGLEPMEEGGGEGGGGGGEGEGSDEAQAQAGARVSSSQD
LAMEEEEQGGSSPSPALPATENGTS
NT seq 3858 nt   +upstreamnt  +downstreamnt
atgagcaggagcggccccctagaaggggctgatgggggaggggacctcaggccaggggaa
cccttttgtcctggagggggtccatcccctgggcctccagagcaccgaccttgtcctggc
cccagcttggctgatgacacggatgccaacagcaatggctccagcggcaatgagtccaat
ggacccgagtccaggggtgcatctcagcggagttcgcacagctcctcctctggcaatggc
aaggactcggccctgctggagaccacggagagcagcaagagcacgaactctcagagccca
tccccacccagcagttccattgcctacagcctcctgagtgccagctctgagccagacaac
ccctctaccagtggctgcagcagtgaacagtcagctcgggcaaggactcagaaagaactc
atgacggcactgcgagagctcaagcttcggctgcccccagagcgcaggggcaagggccgc
tccgggactctggccacattgcagtatgcgctggcttgtgtcaagcaggtgcaagccaac
caggagttctaccagcagtggagcctggaggagggcgaaccgtgtgccatggacatgtcc
acctatactctggaggagctggagcacgtcacgtctgagtatacactccgcaaccaggac
accttctccgtggctgtctccttcctgacaggccgcatcgtctacatttccgagcaggcc
ggtgtcctgctgcgctgcaagcgggatgtgttccggggcgcccgcttctcggagctcttg
gctcctcaggatgtgggcgtcttctacagttccaccaccccatcccgcctgcccacctgg
ggcccaggggcctcctcaggttcaggcctcaaggacttcacccaggagaagtctgtcttc
tgtcgtatcagagggggtcctgaccgggatccggggcctcggtaccagccattccgccta
accccatatgtgaccaagatccgggtctccgacggggcccctgctcagccatgctgcttg
ctcattgcagagcgcattcactctggttatgaagctccccggatcccccctgacaagagg
atcttcaccacacggcacacgcccagctgcctcttccaggacgtggatgagagggctgcc
ccgctgctgggctacctcccccaggacctcctgggggccccagtgctcctcttcctgcat
cccgaggaccgacccctcatgctggccattcacaagaagatcctgcagctggctggccag
ccctttgaccactcccctattcgcttctgtgcccgtaacggggagtatgtcaccatggac
accagctgggctggctttgtgcacccctggagccgcaaggtggcctttgtgttgggccgc
cacaaagtacgcacggcgcccctgaatgaagatgtattcactcccccggcccccagcccc
gctctgtccctggactctgacatccaagagctctcggagcagatccaccggctgctgtta
cagcctgtacacagccccagccccacgggcttctgtggagtcggcccggtgccttcctcc
ggccctctcctcagccctggctcctccagtgagagcaacgggggtgatgccgagggacct
gggcctcctgccccggtgaccttccagcagatctgtaaggatgtgcacctagtgaagcat
caggggcagcagctttttattgagtcccgggcccggcctctgccccggccccgcgtccct
tctactggcacattcaaggccaagacccttccctgccaatccccagacctggaggcggcc
ccagctccaatccaggccccattggccttggccattgaggaggctgagcggaaagaagcc
tccagttgctcctaccagcagatcaactgcctggacagcatcctcaggtacctggagagc
tgcaacctccccggcaccacaaagcgcaaatgtgcctcctcctcttcctgcactgcctct
tcagcctctgatgacgacaagcagcggacaggcccagtctcggtgggcgccaagaaagat
gcatcagcagtgctgcccggggagggggccgcccctctgaaggagccggtggcgggagga
ggagccctgagcccgctcgccctggccaataaggcggagagcgtggtgtccgtcaccagt
cagtgtagcttcagctccaccatcgtccatgtgggagacaagaagcccccggagtcggac
atcatcatgatggaggacgtgcccagcctgcctcccggtccagctcccagcccagccccc
agccccacggtagcccctgagccagccccagacgcctaccgcccagtgggcctgaccaag
gccgtgctgtccctgcacactcagaaggaggagcaggccttcctcagccgcttccgtgac
ttcagcaggctgcgtggactagacagctcctccacagccccctcggcccctggggagcga
ggctgccaccacagccctgccacccacggccgccgccaccattgccgatccaaagccaag
cgctcacgtcaccaccagacagctcgggccgaagcccccggctacatttcccagccctcg
cctgtgccaccctctgccccctggcccccgccaccagccactcctcccttcccagctgtg
gtccagccataccccctccccgtgttccccgcgagaggcggccctcagcctctccctcct
gctcccacgtctgtgcctcctgcagctttccctgcccccctggtgacccccatggtggcc
ttagtgctccctaactatctgttccctaccccatccacctatccctacggggcaccccag
acgcctgccgaggggcctccgacccctgcctcccgctccccgtctccatccctgcccccg
ctgccccccagccctccccaccaccccgactctccgctcttcaactcaagatgcagctcc
ccgctccagctaaacctgctgcagcttgaggagccccctcgcggtgaggggggtgcagcg
gcagggggctctgggagcagtgctgggcccccccctcccagcgaggctgaaccagaggcc
agactggcggaggtaactgagtcctccaaccaggacgctctctcgggctccagtgacctg
ctggagttgctgctacaagaggactcgcgatctggcaccggctctgctgcctcaggctcc
ttgggctccggcttgggctctggttcaggctcccatgaggggggcagcacttctgccagc
atcacacgcagcagtcagagcagccacacaagcaagtactttggcagcatcgattcttca
gaggctgaggctggggctgcccaggccagagctgagcctggggaccaggtcattaagtac
gtgctccaggatcccatctggctgctcatggccaatgctgaccagcgtgtcatgatgact
tatcaggtgccctccagggacatggcctctgtgctgaagcaggaccgggagcggctccgg
gccatgcagaagcagcagcctcggttctcagaggaccagcggagggaactgggtgctgtg
cactcctgggtccggaaaggtcaactgcctcgggcccttgatgtgatggcctgtgtggac
tgcggtagcagcacccaagagcatggccatcctgatgaccctctcttctcagaagtggat
ggactggggctggagcccatggaggagggtggaggcgagggtggtggcggtggtggtgag
ggtgagggcagcgatgaggcccaggcccaagctggggccagggtctcgagctctcaggac
ctggccatggaagaggaagagcaaggtgggagctcacccagtccagccttacctgccaca
gaaaatggcaccagctag

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