Cervus canadensis (wapiti): 122445978
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Entry
122445978 CDS
T07554
Symbol
NFKB2
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit isoform X1
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04010
MAPK signaling pathway
ccad04064
NF-kappa B signaling pathway
ccad04380
Osteoclast differentiation
ccad04625
C-type lectin receptor signaling pathway
ccad05134
Legionellosis
ccad05166
Human T-cell leukemia virus 1 infection
ccad05169
Epstein-Barr virus infection
ccad05200
Pathways in cancer
ccad05203
Viral carcinogenesis
ccad05224
Breast cancer
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
122445978 (NFKB2)
09150 Organismal Systems
09158 Development and regeneration
04380 Osteoclast differentiation
122445978 (NFKB2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
122445978 (NFKB2)
05203 Viral carcinogenesis
122445978 (NFKB2)
09162 Cancer: specific types
05224 Breast cancer
122445978 (NFKB2)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
122445978 (NFKB2)
05169 Epstein-Barr virus infection
122445978 (NFKB2)
09171 Infectious disease: bacterial
05134 Legionellosis
122445978 (NFKB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccad03000
]
122445978 (NFKB2)
Transcription factors [BR:
ccad03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
122445978 (NFKB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank
Ank_2
Ank_3
Ank_5
Ank_4
Death
Motif
Other DBs
NCBI-GeneID:
122445978
NCBI-ProteinID:
XP_043331523
LinkDB
All DBs
Position
8:complement(27708206..27715982)
Genome browser
AA seq
901 aa
AA seq
DB search
MDSCYDPGLDGIIEYDDFKFNPSIVEPKEPAPETADGPYLVIVEQPKQRGFRFRYGCEGP
SHGGLPGASSEKGRKTYPTVKICNYEGPAKIEVDLVTHSDPPRAHAHSLVGKQCSELGVC
AVSVGPKDMTAQFNNLGVLHVTKKNMMEIMIQKLQRQRLRSRPQGLTEAERRELEQEAKE
LKKVMDLSIVRLRFSAFLRASDGSFSLPLKPVISQPIHDSKSPGASNLKISRMDKTAGSV
RGGDEVYLLCDKVQKDDIEVRFYEDDENGWQAFGDFSPTDVHKQYAIVFRTPPYHKMKIE
RPVTVFLQLKRKRGGDVSDSKQFTYYPLVEDKEEVQRKRRKALPTFSQPFGGGSHMGGGS
GGSAGGYGGAGGGGGSLGFFPSSLAYSPYQSGAAPMGCYPGGGGGAQMAAETPSVDAGEE
AAEPSAPPGTPQREQQAPELLHRAREYNARLFGLAQRGARALLDYGVTADARSLLAGQRH
LLTAQDENGDTPLHLAIIHGQTSVIEQIAHVIYHAPHLGVVNITNHLHQTPLHLAVITGQ
TKVVSFLLQVGADPALLDRHGDSAVHLALRAGASAPDLLCALLRSGVPAMPQLLHVPDFQ
GLYPVHLAVRARSPECLDLLVESGAEVEAAERQGGRTALHLATEMEELGLVTHLVTKLRA
NVNARTFAGNTPLHLAAGLGSPTLTRLLLKAGADIHAENEEPLCPLPSPPTSGSDSDSES
PERDTRGSFRGHTPLDLTRSSKVKTLLLNAAQDTMAPPLTPPSPAGPEIPLEDTVLQNLE
HLLDGPGAQGSWAELAERLGLRSLVDTYRRTASPSGSLLRSYQLAGGDLAGLLNALSDMG
LEEGVRLLKGPETQEKLPSTAEVKEDSAYGSQSVEQETEKLGPPPEPPGGLCHGHPQPQV
H
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atggacagttgctacgacccaggtctggatggcatcattgaatatgatgatttcaaattc
aacccgtccattgtggagcccaaggagccagccccagagacagctgatggtccctacctg
gtgatcgtggaacagcctaagcagcgaggcttccgatttcgatatggctgtgaaggccct
tcccatggaggactgccaggtgcctctagcgagaagggccggaagacttatcccacagtc
aagatctgtaactacgagggacctgccaagattgaggtggacctggtaacacacagtgac
ccacctcgtgctcacgcccacagtctggtgggcaaacagtgctcggagctgggggtctgc
gcagtgtctgtggggcccaaggacatgactgcccaatttaacaacctgggtgtcctgcat
gtgaccaaaaagaacatgatggagattatgatacaaaaacttcagaggcagcgtcttcgc
tccaggccccagggccttacggaggctgagcgtcgagagctggagcaggaggccaaggaa
ctgaagaaggtgatggatctgagcattgtgcgactgcgcttttctgccttccttcgagcc
agcgatggctccttctctctgcccctgaagccagttatctcccagcccatacatgacagc
aagtctcctggagcctcaaacctgaagatttctcgaatggacaagacagctggctctgtg
cggggtggagatgaggtttatctgctctgtgacaaggtgcagaaagatgacattgaggtt
cggttctacgaggatgatgagaatggatggcaggcctttggggacttctctcccacagat
gttcacaaacagtatgccattgtgttccgaacacctccctatcacaagatgaagattgag
cgtcctgttaccgtgttcctgcaactgaaacgcaagcgtgggggggatgtctctgattcc
aaacagttcacctattatcctctggtagaagacaaggaggaggtgcagcggaagcggagg
aaagccttgcccaccttctcccagccctttgggggtggctcccacatgggtggaggctct
gggggctcggctgggggttatggaggagctggaggaggaggtggcagcctcggctttttc
ccctcctccttggcctacagcccctaccagtcgggcgcggccccaatgggctgctacccg
ggaggcgggggcggggcgcagatggccgctgagacgcctagtgtggatgctggggaggaa
gccgcagagccgagcgcgccccccgggacgccccagcgcgaacagcaagccccagagctg
ctgcatcgagcccgggagtacaacgcgcgcctgttcggcctggcgcagcgcggcgctcga
gccttgctggactacggcgtcacggcggacgcacgctcgctgctggcgggacagcgccac
ctgctgacggcgcaggatgagaatggagacacgccgctgcacttggccatcatccacggg
cagaccagcgtcattgagcagatagcccacgttatctaccatgccccgcacctcggcgtg
gttaatatcaccaatcacttgcaccagacgcccctgcacctggcagtgatcacagggcag
acgaaggtggtgagcttcctgctgcaggtgggcgcagacccagcactgctggatcggcac
ggagactcagcagtgcacctggcactccgggcaggtgccagcgcccccgacctgctgtgc
gccctgctgcgaagtggggttcctgccatgccccaactgctgcatgtgcctgacttccaa
gggctatacccagtccacctggcagtccgtgcccgaagccccgagtgcctcgatctgctg
gtggagagtggggctgaagtggaggctgcagagcggcaggggggccggacagccctgcat
ctagccacagagatggaggagctggggttggtcacccatctcgtcaccaagctccgggcc
aacgtgaatgcccgcacctttgcgggaaacacacccctgcacctggcagctgggctggga
tccccaacgctcacccgcctccttctgaaggctggtgctgacatccatgcagagaacgag
gagcccctgtgcccactgccttcacctcccacctctggtagtgactcagattccgagagc
cctgagagggacacccgaggcagcttccggggccacacacctcttgacctcactcgaagc
agcaaggtgaagaccttgctgctaaatgctgctcaggacaccatggcgccaccgctgacc
ccgcccagccctgcagggccagagataccccttgaagatacagtcctacagaacctggag
catctgcttgacgggccaggagcccagggcagctgggcggagctggcagaacggctaggg
ctgcgcagtctggtggacacgtatcgaaggacagcttcgcccagtggcagcctcctgcgc
agctaccagctggctggtggcgacttggcgggcctgctgaatgccctgtctgacatgggc
ctggaggagggggtgaggctgctgaagggtccagagacccaggaaaagctgcccagcaca
gcagaggtgaaggaggacagtgcctatgggagccagtcggtggaacaggaaacagagaag
ctgggcccacctcctgagccaccaggagggctctgccatgggcacccccagcctcaggtg
cactga
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