KEGG   Cervus canadensis (wapiti): 122446012
Entry
122446012         CDS       T07554                                 
Symbol
BTRC
Name
(RefSeq) F-box/WD repeat-containing protein 1A isoform X1
  KO
K03362  F-box and WD-40 domain protein 1/11
Organism
ccad  Cervus canadensis (wapiti)
Pathway
ccad04114  Oocyte meiosis
ccad04120  Ubiquitin mediated proteolysis
ccad04218  Cellular senescence
ccad04310  Wnt signaling pathway
ccad04340  Hedgehog signaling pathway
ccad04390  Hippo signaling pathway
ccad04710  Circadian rhythm
ccad05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:ccad00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    122446012 (BTRC)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    122446012 (BTRC)
   04340 Hedgehog signaling pathway
    122446012 (BTRC)
   04390 Hippo signaling pathway
    122446012 (BTRC)
 09140 Cellular Processes
  09143 Cell growth and death
   04114 Oocyte meiosis
    122446012 (BTRC)
   04218 Cellular senescence
    122446012 (BTRC)
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    122446012 (BTRC)
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    122446012 (BTRC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ccad04121]
    122446012 (BTRC)
   03036 Chromosome and associated proteins [BR:ccad03036]
    122446012 (BTRC)
Ubiquitin system [BR:ccad04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     122446012 (BTRC)
Chromosome and associated proteins [BR:ccad03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     122446012 (BTRC)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_WDHD1_1st WD40_Prp19 Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_TEP1_C Beta-prop_TEP1_2nd DSE1_N EIF3I WD40_MABP1-WDR62_2nd WD40_Gbeta Beta-TrCP_D WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_SCAP Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR41 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd F-box-like Beta-prop_EIPR1 CFAP251_N Beta-prop_RIG_2nd WDR90_beta-prop_4th ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_Aladin PAC11 ASA1 Beta-prop_SPT8 Beta-prop_IP5PC_F NBCH_WD40 TRM82_WD Beta-prop_DCAF4 Beta-prop_DCAF12 Beta-prop_VPS8 F-box Beta-prop_IFT140_1st WD40_like Beta-prop_NOL10_N Beta-prop_Nup120_160 WD40_RFWD3 Beta-prop_HPS5 Beta-prop_WDR11_2nd Beta-prop_WDR19_1st F-box_5 WD40_2 DUF4508 Aq_678 PAN_3 DUF6188
Other DBs
NCBI-GeneID: 122446012
NCBI-ProteinID: XP_043331597
LinkDB
Position
8:complement(28420761..28589092)
AA seq 628 aa
MDPAEAVLQEKALKFMCSMPRSLWLGCSSLADSMPSLRCLYNPGTGALTAFQNSSEREDC
NNGEPPRKIIPEKNSLRQTYNSCARLCLNQETVCLASTAMKTENCVAKGGDDLKSNNEKR
SPFYFWLHSQMTKLANGTSSMIVPKQRKLSASYEKEKELCVKYFEQWSESDQVEFVEHLI
SQMCHYQHGHINSYLKPMLQRDFITALPARGLDHIAENILSYLDARSLCAAELVCKEWYR
VTSDGMLWKKLIERMVRTDSLWRGLAERRGWGQYLFKNKPPDGNAPPNSFYRALYPKIIQ
DIETIESNWRCGRHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKR
ILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMV
TCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCE
FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK
RIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTI
LIWDFLNDPAAQAEPPRSPSRTYTYISR
NT seq 1887 nt   +upstreamnt  +downstreamnt
atggacccggccgaggcggtgctgcaggaaaaagcgctcaagtttatgtgctctatgccc
aggtctctgtggctgggctgctccagcctggcggacagcatgccttcgctgcgatgcctg
tataacccagggactggcgcactcacagctttccagaattcctcagagagagaagactgt
aataatggcgaaccccctaggaagataataccagagaagaattcacttagacagacatac
aacagctgtgccagactctgcttaaatcaagagacagtatgtctagcaagcactgctatg
aagactgaaaattgtgtggccaaaggaggggacgatttaaaatccaacaatgaaaaacga
agccccttttatttctggctacattcccagatgacaaaacttgccaatggcacttccagt
atgattgtgcccaagcaacggaaactctcggcaagctatgagaaggaaaaggaactgtgt
gtcaaatattttgagcagtggtcagagtccgatcaagtggaatttgtggaacatcttata
tcccaaatgtgtcattaccaacatgggcacataaactcatatcttaaacctatgttgcag
agggatttcataactgctctgccagctcggggtttagatcacattgctgagaacatcctg
tcatacttggatgccagatcactatgtgctgctgaacttgtgtgcaaagaatggtaccga
gtgacgtctgatggcatgttatggaagaagctcatcgaaagaatggtcaggacagattct
ctgtggagaggcctggcagaacgaagagggtggggacagtatttgttcaaaaacaaacct
cctgatggaaatgcaccccctaactctttttatagagcactttatcctaaaattatacaa
gacattgagacaatagaatctaattggagatgtggaagacatagcttacagagaatccac
tgccgaagtgaaacaagcaaaggagtttactgtttacaatatgatgatcagaagatagta
agcggccttcgagacaacacaatcaagatctgggataaaagcacattggaatgcaagcgg
attctcacaggccacacaggttctgtcctgtgtctccagtatgacgagagggtgatcata
actgggtcgtcggattccacggtcagggtgtgggatgtaaatacaggtgaaatgctgaac
acattgattcaccattgtgaagcagttctgcacttgcgtttcaataatggcatgatggtg
acctgctccaaagaccgttccattgcagtatgggatatggcctccccgactgacatcacc
ctccgcagggtgcttgtcggacatcgagctgcagtcaatgttgtagactttgatgataag
tacatcgtttctgcatctggggataggactataaaggtatggaacacaagtacttgtgag
tttgtacggaccttaaatggacacaaacgtggaattgcctgtttgcagtacagagacagg
ctggttgtgagtggctcatctgacaacacaatcagattatgggatatagaatgtggtgca
tgcttacgagtgttagaaggccatgaggaattggtgcgctgtattcgatttgacaacaag
aggatagtcagtggagcctatgatggaaaaattaaagtgtgggatcttgtagctgccttg
gaccctcgtgcgcctgcaggaactctttgtctacggacccttgtggagcattctggaaga
gttttccgactccagtttgatgaattccagattgtcagtagttcacatgatgacacaatc
ctcatctgggacttcctaaatgatccagctgcccaagctgaacctccccgctccccttct
cgaacatacacctatatctccagataa

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