Cervus canadensis (wapiti): 122446017
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Entry
122446017 CDS
T07554
Symbol
CFAP43
Name
(RefSeq) cilia- and flagella-associated protein 43
KO
K24223
cilia- and flagella-associated protein 43
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccad03037
]
122446017 (CFAP43)
Cilium and associated proteins [BR:
ccad03037
]
Motile cilia and associated proteins
Tether/Tether head (T/TH) complex
122446017 (CFAP43)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
WDR55
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_HPS5
CFAP43_N
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
122446017
NCBI-ProteinID:
XP_043331613
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All DBs
Position
8:26045324..26151126
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AA seq
1668 aa
AA seq
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MAQGRERDEVHNVALGPSLSVRWVQGFPKQNVHFVNDSTICYPSGNFVIFINIETKKRTV
LQCMNGIVGVVATNIPYEVVAFSDRRLRPLIYIYNFPGLTRRTKLKGNVLLDYTLLSFSY
CGTYLASYSSLPEFELALWNWESGVILCRKSQPGIDVSQMTFNPMNWHQLCLSSPSAVTV
WTIERSNQEHYLKAKSVKLPLEDGSFFNETDVIFPQSLPKDPIYGPVLPVSAIAGLVGEE
AETFRPKDDLYALLHPTMHCWTPTSDLYIGCEEGHLLMVNGENLKVTVLNKIEDGPPRVE
RNLISPVTMAYQKGGVLASGIDGFVYSLLIKDTDYKVEDFLEVERPVEHLMFSPSYRILL
IQTDKGSVFIYTFGEEPTFEKVLEACDGKFQATDFITPGNEYCMTLTQSGEVCVWGIEDG
ACVSRIYVNIQATVLACSPSSLSAAVGTEDGLVHFLDVRDVESPHEVHKAFLSESPVQHL
LYDQRGMYVFVGTSEGHIFVINAKPSSSFEILGFIEMGKGILQISTVSPLETDIVEVMVL
SPFPETRRSRLEIFSLPKILPEVSASFADERGRLRDEFIHKFVYETEHTLSSAVLNLQSN
RIYGFCNQVPYICSYLLPKKEHSGVYILKPYQKIQSKQYGPGMLSLSPHGLWLITIAKCG
ILCIRDIHTLETFTRCRSHSHQGHGIQSVRISMDGQSILVNGRDDGTLVNLRWRRFGGVL
ANDILEYSQQLTTYLKTIMDEENDYLSIPRRESLDLESQSEHAVNENMQLTIDSSQEELV
KVDHTEEIPWIQQKSQEAIKKEVKLFSNKRREIKRGIKALAKTVLDMMEENEAVDDIAKL
EQQEFGLDLEELERLHNENEQEVAKIRNDVEMQNLAKRYLSEIIKEECWNSMAVKGRALK
CFHIPYVVENFPMKERTDEELKELKRVVQQKKIETECLKLRKEVVEVQSAITLVKKHHEE
EDEEEEEDGTVKDTSLPNYMLGSLSTDFRVHTSLLSSQLELHSREEKINQIILLKDIIYK
VKTAFNSEFDAAYKQKEIEIARVKEKNVRIKEIILDLELEESVWQPEFEDCEKPERTLVV
ESSEISAPRHIKPWQKAKAELLVTREMERLLLTRGPDLRRRALMDMMGGVLEVKKEDILR
MVIPQPAFMVKPDALWSEEERKHFKEYEKKVKELNEERDKYRKSLETEMKKLQNSIQEST
QNFDKHLKRLFERRVKAEMVVNQEELKINNLVFSLLLDEEISSRETFLNNYLARKQEEKN
QTSEAIRKSREDLDMYKEHYDNLLAEDKVLDRSFKKEFSEIPSHQVDILYKLFKRRPRIH
KHKVHAETTSLVPFGERPGSGKLNKDAFAQLMKAMDDLDSINNMPEGLDTSVWEHFCMTR
RAKVENEQKVKQKAAGLIEMVAFLRRRTEDDEKVQHEIEKVFHELILLQEDKVKFQLNLT
IQILLKQGQVELENFQLMLDYSDAILINKVIIEDLNSVIRAQGQKKVASMMESKEVHKGI
FQIEWEHKKMEMEMEDLNQKAWDIQMLFFSRDRQKYLSEPNYETLIAIQIGIMEQTIDVL
DKTHKKNVENCKKLLKKLRRFSNQKDIANYTLSCNLREELVAVSERKDICNAMGSKLTCE
KIAKERYENMMRQQKLTKISKEQAEQISILQAEVERLRMKTFPALVQM
NT seq
5007 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaggccgggaacgagatgaagtccacaacgtcgccctcggcccgtccctgtcc
gtgagatgggtacaaggattccccaagcagaatgttcattttgtcaacgacagcaccatt
tgctacccttctgggaattttgtaatatttatcaatattgaaaccaagaaaagaactgta
ctccagtgtatgaatggaattgtgggcgtcgtggcaactaacattccttatgaagttgtg
gctttttctgatcgacggctaagaccactcatatacatatataactttcctggattaacc
agaaggaccaaattaaaaggcaacgttctcctagactacactttactttccttcagttac
tgtggcacctacctggctagttactcctccctcccagaatttgaactggccctctggaac
tgggaatcaggtgtcattttgtgcaggaagtcacaacctggtatagatgtgagccagatg
acttttaaccccatgaattggcaccagctgtgcttgtcaagtccaagtgcagtaactgtg
tggaccatcgaaagaagtaaccaggaacattatctcaaagcaaagtcagtaaaactgcct
ttggaagacggatcattttttaatgagacagatgtcatttttccccagtcgttgcccaag
gatcctatctatggacctgtgctccctgtgtcagccatcgccggactcgtgggtgaagag
gcagaaactttcaggcctaaagacgatctgtatgctttgcttcacccgactatgcactgc
tggactccaacaagtgacctatacattggctgtgaagagggtcaccttttaatggttaat
ggagaaaacttgaaggtaactgtgcttaataagatagaagacggaccaccaagggttgaa
agaaatcttatcagtccagtcaccatggcgtatcagaagggaggcgtgcttgcttctgga
attgatggctttgtgtattctttacttattaaagatacagattataaagtagaggatttt
cttgaggttgaaaggccggtggaacatttgatgttttctcctagttacagaatattgctg
attcagacagacaaggggtctgtttttatttatacttttggtgaggagccaacctttgaa
aaagtcctagaggcttgtgatgggaaatttcaggcaacagactttatcacacctggaaat
gaatactgcatgacactcacacagtcaggggaagtttgtgtttggggtatagaggatggt
gcttgtgtcagcaggatttatgtgaatatccaagcaacagttctggcctgctctccttcc
tccctctctgcagccgtggggaccgaggatggccttgtccactttctcgacgtccgggat
gtggaatcccctcatgaagttcataaggcctttctctctgaatcacctgtgcagcacctc
ctgtatgaccagagaggaatgtatgtattcgttggaacatcagaaggacacatttttgtt
atcaatgccaaaccctcaagttcatttgagattcttggattcatagagatgggcaaaggc
attttacaaatatccacagtgtctcctttggaaacagacatagtagaagtgatggtgctt
tctccatttccagaaacaagaagaagcagactggaaatattttctctgcctaaaatacta
ccggaagtttctgcaagctttgctgatgaacgagggaggctgagagatgaattcattcat
aagttcgtgtatgagacagagcacactttgtcctctgcggtcttgaacttgcaaagtaac
cgaatatatggcttctgtaatcaagtgccatacatctgcagctatcttcttcctaaaaaa
gaacatagtggtgtttacattcttaagccataccaaaaaatacaaagcaaacaatatgga
cctggaatgctctctctgtctccacatggattgtggctcataacaatagctaaatgtgga
attctgtgcatccgagatattcatactttggaaacatttactcggtgtcggagtcattct
caccaggggcatgggattcagtcggtgagaatttcaatggatggacaaagcattctggtg
aatgggagagatgacggcacactggttaacctaagatggaggcggtttggaggagtctta
gccaatgatattcttgaatatagccagcaacttacaacttacctgaagaccatcatggat
gaggagaatgattatttaagtataccaagaagagaatccttggatttggaatcacaatct
gaacatgcagtaaatgagaatatgcagttgaccattgactcatcacaagaggaattagtc
aaagttgatcatacagaagaaattccatggatacaacagaaaagccaagaggccatcaaa
aaggaggttaaattgttttccaacaaaaggagagagataaaaagaggaatcaaagcactc
gctaaaactgttctggacatgatggaagaaaatgaagcagtagatgatattgcaaaatta
gagcaacaagaatttggcctggatcttgaagaactggaaaggctgcataatgaaaatgag
caagaagtggcaaagataagaaatgatgttgagatgcaaaacctagccaagagatatttg
tctgaaatcatcaaagaagaatgctggaattcgatggctgtgaaaggccgagctcttaag
tgctttcacatcccctatgtggttgagaacttcccaatgaaagaacgcacagatgaagag
ttgaaagaattgaagagagttgtgcagcaaaagaagattgaaacagagtgtcttaaacta
cggaaagaagttgtagaggttcagtctgcaattaccttggttaaaaagcatcatgaagag
gaggatgaagaagaggaagaagatgggacagtaaaagataccagcttgcccaattacatg
cttggcagtctgagtactgattttagggtacatacctctttattgtcaagccagttggaa
cttcattccagagaggagaaaatcaaccaaattatattgctgaaagatattatttacaag
gtaaaaacagctttcaatagtgagtttgatgctgcatataaacaaaaagagattgaaatt
gcacgtgtgaaggaaaaaaatgtaaggatcaaagaaattattttagatctggagttggaa
gaatcagtctggcaaccagaatttgaggactgtgagaagccagagagaacccttgttgtg
gaaagtagtgagatttcagctccaagacatattaaaccgtggcaaaaagccaaggcagag
ttgcttgtgacccgtgaaatggagcgattgcttctgacacggggccctgacttaagacgc
cgagccctcatggacatgatgggaggagttctggaagtcaagaaggaagacattttgaga
atggtgattcctcagcctgctttcatggtaaaacctgatgctttgtggtctgaagaagaa
aggaaacacttcaaagagtatgagaaaaaagtcaaggagttaaatgaagagagagataag
tatagaaagtctttagaaacagaaatgaagaaactccaaaattctattcaagaaagcaca
cagaattttgacaaacatttgaaaagactctttgaaaggagagtgaaggcagagatggtt
gtcaaccaggaggaattgaaaataaacaaccttgttttctctttactgttggatgaagaa
ataagctccagagaaacattcctgaacaactaccttgcaaggaagcaggaggagaagaac
cagacctcagaggccatccggaagtctagagaagacctggatatgtacaaggaacactat
gacaacttactggcagaagacaaagttctggaccgcagctttaaaaaggaattttctgaa
attcccagtcatcaggtggatatactctacaaactttttaaacgccgaccaaggattcac
aaacacaaagtacatgcagaaacaaccagtcttgtgccttttggagagcgaccaggatct
gggaaattgaataaggatgcctttgcccagttaatgaaagccatggatgacttggacagt
attaataatatgccagaaggcttggacacctccgtctgggaacatttctgcatgaccaga
agagcaaaagtggaaaatgaacagaaagtaaagcagaaagctgctggcttaatagaaatg
gtggctttcctccggagaagaactgaggatgatgagaaggtgcaacatgaaattgaaaaa
gtgttccatgagctcatcctattacaggaagacaaagtgaaattccagttgaatttgacg
atccaaatcctccttaaacaaggacaggtagaactggagaatttccagttaatgctggat
tattctgatgcgatcctcatcaacaaggtcataattgaagacttgaattctgtgattcgg
gctcaaggacaaaagaaagttgctagcatgatggaaagtaaagaagtccataaaggaata
tttcagattgagtgggaacataagaagatggagatggaaatggaagatctaaatcagaag
gcttgggatattcagatgctgtttttttcaagagatcgtcagaagtacctaagtgaacca
aactatgagactctgattgccattcagattggaataatggagcagactattgatgtttta
gataagactcacaaaaagaatgtggagaactgtaaaaagctgcttaaaaagctgagaagg
ttcagcaatcaaaaagatatagcaaattataccctaagttgcaatttacgagaagagctg
gtggctgtctcagagagaaaagacatctgtaatgcaatggggtctaaactgacttgtgaa
aagattgccaaagaacgatacgaaaacatgatgcgacaacaaaagttaacaaaaatttca
aaagaacaagctgagcagatttcaattctacaggctgaagttgaaagattaagaatgaaa
acatttcctgctcttgttcaaatgtaa
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