Cervus canadensis (wapiti): 122446026
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Entry
122446026 CDS
T07554
Symbol
TWNK
Name
(RefSeq) twinkle protein, mitochondrial isoform X1
KO
K17680
twinkle protein [EC:
5.6.2.3
]
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
122446026 (TWNK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ccad03029
]
122446026 (TWNK)
Enzymes [BR:
ccad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
122446026 (TWNK)
Mitochondrial biogenesis [BR:
ccad03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
122446026 (TWNK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
DnaB_C
ATPase
AAA_22
AAA_16
AAA_29
T2SSE
AAA_23
AAA_19
nSTAND3
TsaE
ABC_tran
cobW
SMP_C2CD2L
AAA_7
PhoH
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
122446026
NCBI-ProteinID:
XP_043331629
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All DBs
Position
8:complement(28891207..28896599)
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AA seq
684 aa
AA seq
DB search
MWVLLRSGYPLRILLPLRGAWMGRRGLPRSLAPGPPRRRYRKEALPALEAPVLPVTTTEI
RQYLRARGIPFQDGHSCLRAPSPFVGASKLKDQTVAATSFSLFIDKTTGRFLCMTTLAEG
SWEDFQAGVEGQGDGAREGVLLSEAPEAEDSEEVRRIWDRAIPLWELPEPEEAQLARMMF
GLTKVTDDTLKRFSVRYLRPARRLVFPWFSPGGLGLRGLKLLGAETQGGGVQYVETTIPR
PGAYHNLFGLPLISRRDVEVVLTSRELDSLALSQSTGLPTLALPRGTACLPPALLPYLEQ
FRRVVLWLGNDLRSWEAAKLFARKLNPKRCSLVRPGDQQPSPLEALNQGLNLSRILRTAL
PAWHKSIVSFRQLREEVLGELSNVEQAAGVRWSRFPDLNRLLKGHRKGELTVFTGPTGSG
KTTFISEYALDLCNQGVNTLWGSFEISNVRLARVMLTQFAVGRLEEQLDKYDEWADRFED
LPLYFMTFHGQQSIRTVIDTMQHAVYVYDICHVVIDNLQFMMGHEQLSTDRIAAQDYIVG
AFRKFATDSSCHVTLVIHPRKEDDDKELQTASIFGSAKASQEADNVLILQDRKLVTGPGK
RYLQVSKNRFDGDVGVFPLEFNKSSLTFSIPPKSKARLKKIKDDNGLVAKKPSSGKKGAM
PQISDTCSNQARNPNHPDFSKPSR
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtcctcctccgaagcggataccccctccgcatcctgctgcccctgcgtggggcg
tggatgggacggagaggcctgccccgaagcttggcccctggccctcctcgcagacggtac
aggaaggaggctcttcccgccttggaggcaccagtgttgcctgtaaccacaactgaaatc
cgccagtatttgcgggcccgtgggatccccttccaggatggacacagctgcctgcgggca
ccgagtccttttgtgggggcctcaaagctcaaggaccagactgttgcagccacttctttc
agcctgtttattgacaagaccacgggccgctttctctgcatgaccaccctagcagagggg
agctgggaagacttccaggccggcgtggaggggcaaggggatggggccagagaaggggtt
ctactcagtgaggccccagaagctgaggacagtgaagaggtccggaggatctgggaccga
gccatacctctctgggagctgcctgagccagaggaggcccagctagctcgcatgatgttt
ggcctcaccaaagtgacagatgacacacttaagcgtttcagcgtgcgctatctgcggcct
gctcgaaggcttgtcttcccttggttctcccctggaggtttgggattgcgaggcctgaag
ctactaggggccgaaacccagggtggtggggtgcagtatgtggagaccaccattccccgg
cctggtgcctaccacaacctgtttgggttaccactgatcagtcgacgagatgttgaagtg
gtattgacgagtcgtgagctggacagtctggccttgagccagtccacagggctgcccact
ctagccctaccccgaggaacagcctgcttaccccctgccctgcttccttacctcgaacag
ttccgacgggttgtgctctggctggggaatgaccttcggtcctgggaagctgccaagttg
tttgcccgaaaactgaaccccaaacgatgctccttggtgcggcctggggaccagcagccc
tctcctctggaggctctgaaccaaggcttaaacctttctcgtatcctgcgtactgccctg
cccgcctggcacaagtctatcgtgtctttccggcagcttcgggaggaggtgctaggagaa
ctgtcaaatgtggagcaggcagctggtgttcgctggagccgcttcccagacctcaatcgt
ctcttgaagggacatcggaagggcgagctgacagtcttcacagggccgacaggcagtgga
aaaacaacattcatcagtgagtatgccctggatttgtgtaaccaaggagtgaacacgctg
tggggtagctttgagatcagcaacgtgagactagcccgtgtcatgctgacacagttcgct
gtgggacgactagaagagcaactcgacaaatatgatgagtgggctgaccgctttgaggac
ttgcccctctatttcatgacttttcatgggcaacagagcatcaggactgtaatagacaca
atgcaacatgcagtctatgtttacgacatttgtcatgtggtcatcgacaatctgcagttc
atgatgggtcatgagcagctgtccacagacaggattgcagctcaagactacattgtcggg
gcctttcggaagtttgcaacagacagtagctgccatgtaacactggtcattcatccccga
aaagaggatgatgataaagaactacagacagcatccatttttggctcagccaaagcaagc
caggaagcagacaacgttctgatcctgcaggacaggaaactggtaactgggccagggaaa
cggtatctgcaggtgtccaagaaccgctttgatggagatgtaggtgtcttcccacttgaa
ttcaacaagagttctctcaccttctccataccaccaaagagcaaggcccggctcaagaag
atcaaggatgacaatggactagtggccaaaaaaccctcttctggcaaaaagggggctatg
ccccagatctctgacacttgttccaaccaggcccgcaaccccaaccatccagacttctcc
aagccttcaagatga
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