Cervus canadensis (wapiti): 122446077
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Entry
122446077 CDS
T07554
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4 isoform X1
KO
K07573
exosome complex component CSL4
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122446077 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccad03019
]
122446077 (EXOSC1)
Messenger RNA biogenesis [BR:
ccad03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
122446077 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
122446077 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
Motif
Other DBs
NCBI-GeneID:
122446077
NCBI-ProteinID:
XP_043331763
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All DBs
Position
8:31913696..31922001
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AA seq
195 aa
AA seq
DB search
MAPPVRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLTKSSENGALPVISVMRETE
SQLLPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEIYK
SFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGVQMVPISWCEMQCPKTHTK
EFRKVARVQPEFLQT
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggcgccacccgtgaggtactgcatccccggcgaacgtttgtgtaacttggaggagggc
agcccgggcagcggcacctacacccggcacggctacatcttctcgtcgcttgctggctgc
ttgacaaagagcagcgagaacggcgcgcttcctgtcatatctgtgatgagagaaacagaa
tcccagttactgccagatgtaggagctattgtaacctgtaaggtctccagcatcaattca
cgctttgccaaagtacacatcctatatgtggggtccacgccacttaagaactcttttcga
ggaaccatccgcaaagaagacgtccgagctactgaaaaagacaaggttgaaatttacaag
agtttccgcccaggggacatcgtcttggccaaagtgatctccctaggtgatgcacagtcc
aactacctgctaaccacagccgaaaatgagctgggagtggtggtggcccacagcgaatcg
ggtgtccagatggtccccatcagctggtgtgagatgcaatgcccgaagacccacaccaaa
gaattccggaaggtggcccgagtacagcctgagttcctgcagacctaa
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