Cervus canadensis (wapiti): 122446145
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Entry
122446145 CDS
T07554
Symbol
SMC3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04110
Cell cycle
ccad04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
122446145 (SMC3)
04114 Oocyte meiosis
122446145 (SMC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccad03036
]
122446145 (SMC3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ccad00535
]
122446145 (SMC3)
Chromosome and associated proteins [BR:
ccad03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
122446145 (SMC3)
Meiosis-specific proteins
Cohesin complex and associated proteins
122446145 (SMC3)
Proteoglycans [BR:
ccad00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
122446145 (SMC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
OmpH
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
122446145
NCBI-ProteinID:
XP_043331936
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All DBs
Position
8:complement(20274573..20312529)
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AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKEKNLEQYNKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLDHFRRKGINQHVQNGYHGIVMNNF
ECEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAY
PETNDAIPMISKLRYNPRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDVRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELEAINKRVKDTMARSEDLDNSIDKTEAGIKELQKS
MERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
SLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSGESERG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIMELAVHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEMAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacataaagcaggttattatccagggttttcgaagttatagagatcaaacaattgta
gatccgttcagttcaaaacataatgttattgtgggcagaaatggatctggaaaaagtaac
tttttttatgcaattcagtttgttctcagtgatgagtttagtcatcttcgtccggaacag
cgattggctttgttacatgagggtactggtcctcgtgttatttctgcttttgtggagatt
atttttgacaattcagacaaccggttacccatcgacaaagaggaagtttcacttcgaaga
gttatcggtgccaaaaaggatcagtatttcttagacaagaaaatggtcacgaaaaatgat
gtgatgaacctccttgaaagtgctggtttttctcgaagcaatccttattatattgttaaa
caaggaaagattaaccagatggcaacagcaccagattctcagagactaaaactattaaga
gaagtggctggtactagagtgtatgatgaacgaaaagaagaaagcatatctttaatgaag
gaaacagagggaaaacgggaaaaaatcaatgagttgttaaaatacattgaagagagatta
catacattagaggaagaaaaggaagaactagctcagtatcaaaagtgggataagatgaga
cgagccctggaatataccatttacaatcaggaacttaacgaaactcgtgctaaacttgat
gagctttctgctaagcgagagacaagtggagaaaaatcccgacaattaagagatgctcag
caggatgcaagagataaaatggaggatattgagcgccaagttagagaactgaaaacaaaa
atttcagctatgaaagaagaaaaggaacagctcagtgctgaaagacaggaacaaattaag
cagagaactaagttggagcttaaagccaaggatttacaagatgaattggcaggcaatagt
gaacagaggaaacgcttattaaaagaaaggcagaagctgcttgaaaaaatagaagaaaag
cagaaagaactggcagaaacagaacctaaattcaacagtgtaaaagaaaaagaagagcga
ggaattgctagattggcccaagctacccaggaaagaacagacctttatgcaaagcaaggt
cgaggaagccagtttacatcaaaagaagaaagggataagtggattaaaaaggaactcaag
tctttggatcaagctattaatgataagaaaagacagattgctgctatacataaggatttg
gaggacactgaggcaaataaagagaaaaatttggagcaatataataaactggatcaggat
cttaatgaagtcaaagctcgagttgaagaactggacagaaaatactatgaagtaaaaaat
aagaaagatgaattacaaagtgaaagaaattacttgtggagagaagagaatgcagaacag
caggcacttgctgctaaaagagaagatcttgaaaagaaacagcaacttcttagagctgca
acaggaaaggccattttaaatggaatagatagcataaataaagtgctagaccacttccgt
cgaaaaggaataaaccagcatgttcaaaatggctatcatggtattgtgatgaataacttt
gaatgtgagcctgccttctacacatgtgtggaagtcactgctggaaataggttattttat
cacattgttgattcagatgaagtcagcacgaagattttgatggagtttaataaaatgaat
cttcctggagaggttactttcctgcctcttaacaagttagatgtaagggatactgcctat
cctgaaaccaatgatgctattcctatgataagtaaattgaggtacaatcccagatttgac
aaggctttcaaacatgtatttggaaaaacacttatttgccgtagtatggaagtttcaacc
cagctggcccgtgctttcactatggactgcattaccttggaaggtgaccaagttagtcat
cgaggtgctttgactggaggctattatgatacaaggaagtctagacttgaattacaaaaa
gatgttagaaaagcagaagaagaacttggtgagcttgaagcgaagctcaatgaaaatctg
cgcagaaatattgaaaggattaataatgaaattgatcagctgatgaaccaaatgcagcaa
atagagactcagcaaaggaaatttaaagcatctcgagatagcatattatcagaaatgaag
atgttaaaagagaagaggcagcagtcagagaaaacctttatgcccaagcaacgtagctta
caaagtttggaggcaagtttgcatgctatggagtccaccagagaatcactgaaagcagaa
ctgggaactgatttgctttctcaacttagtctggaagatcagaagagagtagatgcactg
aacgatgaaattcgtcagcttcagcaggaaaacagacaactactgaatgaaagaattaaa
ttagaaggtattattactcgagtagagacttacctcaatgagaatttgagaaaacgcttg
gaccaagtagaacaggaactcaacgaactgagagagacagaagggggtactgttctcacc
gctacaacctcagaacttgaagccatcaataaaagggtgaaagataccatggcacgatca
gaagatttggacaattccatcgataaaacagaagctgggattaaggagttgcagaagagt
atggagcgctggaaaaatatggaaaaagaacacatggatgctataaatcatgatactaaa
gaactagaaaagatgacaaatagacaaggcatgctgctgaagaagaaagaagagtgtatg
aagaaaattcgagaacttggatcacttcctcaggaagcgtttgaaaaataccaaacactg
agcctcaaacagttgtttcgaaaacttgaacagtgcaacacagaattgaagaagtacagc
catgttaacaaaaaagctttagatcagtttgtaaatttctcagagcagaaagaaaagtta
ataaagcgacaagaagagttggacagggggtacaaatcaatcatggaactgatgaacgta
cttgaacttcgaaaatacgaagctattcagttaactttcaaacaggtatccaaaaacttt
agtgaagtattccagaagttggtccctggtggcaaagctactttggtgatgaagaaagga
gatgtggaaggcagtcagtctcaggatgaaggagaagggagcggtgaaagtgagaggggc
tctggatcacaaagcagcgttccatcagttgaccagttcactggagttggaattagggtg
tcatttacaggaaaacaaggtgaaatgagagaaatgcaacagctttcgggtggacagaaa
tccttggtagctcttgctctgatttttgccattcagaaatgtgacccagctcctttttac
ttgtttgatgagattgaccaggctctggatgctcagcacagaaaggctgtgtcagatatg
attatggagcttgctgtacatgctcaattcattacaactacttttaggcctgagctgctt
gagtcagctgacaaattctatggtgtgaagttcagaaataaggttagtcatattgatgtg
atcacagcagagatggccaaagactttgtagaagatgataccactcatggttaa
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