Cervus canadensis (wapiti): 122446203
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Entry
122446203 CDS
T07554
Symbol
CSTF2T
Name
(RefSeq) cleavage stimulation factor subunit 2 tau variant
KO
K14407
cleavage stimulation factor subunit 2
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122446203 (CSTF2T)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccad03019
]
122446203 (CSTF2T)
Messenger RNA biogenesis [BR:
ccad03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
122446203 (CSTF2T)
U7-dependent histone pre-mRNA processing factors
122446203 (CSTF2T)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
122446203
NCBI-ProteinID:
XP_043332058
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Position
8:complement(42423295..42427091)
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AA seq
601 aa
AA seq
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MSSLAVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGPAAPIIDSPYGDPID
PEDAPESITRAVASLPPEQMFELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMR
IMDPEIALKILHRKIHVTPLIPGKSQSVSGPGPGPGPGLCPGPNVLLNQQNPPAPQPQHL
ARRPVKDIPPLMQTPIQGGIPPQGPMPAAVPGPGPLTPGGAMQPQVGMPGVGPVPLERGQ
VQISDPRAPMPRGPMTAGGLPPRGLLGDAPNDPRGGTLLSVTGEVEPRGYLGPPHQGPPM
HHAAGHDSRGPSSHEMRGGPLADPRMLMSEPRGPMIDQRGLPMDGRGSRDSRGMETRAME
TEVLETRVMERRGMETCAMEARGMEARGMDARGMEMRGPGPSSRGPMTGGIQGPGPINMG
AGGPQGPRQVPSISGVGNPGPGMQGAGMQGGGMQGAGIQGAGMQGAGMQGAGMQGAGKQG
GGQPSSFSPGQSQVTPQDQEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGT
S
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtttggcggtgagagacccggcaatggatcgatcactgcgttccgtgttcgtg
gggaacattccgtatgaggcaactgaagagcagttaaaggacattttctcagaggttggt
tctgttgtgagtttccggctggtatacgatagagagacgggcaaacctaagggttatggc
ttctgcgagtaccaagaccaggagaccgcgcttagtgccatgcggaaccttaatgggcgg
gagttcagcgggagagcgcttcgcgtggacaatgcagccagtgaaaagaacaaggaggag
ctaaagagcctagggcctgcagcgcctatcattgactcaccctacggggaccccatcgat
ccagaagatgctcctgagtcgattaccagagcagtcgctagtcttcccccggagcagatg
tttgagctgatgaagcagatgaagctctgtgtccaaaacagccaccaggaagctcgaaat
atgttacttcaaaacccacagctggcttatgcgctgttgcaggcacaagtagtgatgaga
attatggatccagagattgctctgaaaattctgcatcgcaaaattcatgtcacaccactc
atcccagggaaatctcaatccgtttctggccctggccctggccccggccctgggctctgt
cctggacctaacgttctgctgaaccagcagaaccccccggcccctcagcctcaacatttg
gccagaagacctgtgaaagacatccctcctctgatgcagacccctatccagggtggaatt
ccaccccaaggcccgatgccagccgcagttcctggccctggccccttaactcctggcgga
gcaatgcagcctcaagttggaatgccaggagttggccctgtgcccttagagcgggggcag
gtgcagatatctgatcccagagctcctatgcctcgtggacccatgactgctggtggcctg
cctcctcgaggactgttaggggatgctccaaatgacccacgtggagggactttgctttca
gtcactggagaggtggagcccagaggctatcttggcccaccacatcagggtcctccaatg
caccatgccgctggtcatgacagcaggggcccttcctcacatgagatgaggggagggccc
ttagcagatcctagaatgctcatgagtgagcccagaggacctatgatagatcaaaggggc
ctacctatggatggcagaggcagcagagactctcgagggatggagactcgagccatggaa
acagaggtcttagagacacgagtgatggagagaagaggaatggagacctgtgcaatggaa
gccagaggaatggaagcgagaggcatggatgcaagaggaatggagatgaggggccctggc
cccagttcgagaggccctatgactgggggaattcagggtccaggtcctattaatatgggg
gcaggtggtcctcagggacccagacaggttcccagcatttcaggggtgggaaaccctgga
cctggcatgcagggggcaggtatgcaaggaggtggcatgcagggggcaggcatacaaggt
gctggcatgcagggggcaggcatgcaaggagctggcatgcagggggcaggcaagcaaggt
ggaggccagcctagcagttttagtcctgggcagagccaagtaaccccccaggatcaagaa
aaggcagctttgatcatgcaggttcttcagctgactgcagatcagattgccatgctgcct
cctgagcaaaggcagagtatcttgattttaaaggaacaaatccagaaatctactggaact
tcttga
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