Cervus canadensis (wapiti): 122446250
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Entry
122446250 CDS
T07554
Symbol
LDB3
Name
(RefSeq) LIM domain-binding protein 3
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122446250 (LDB3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccad04990
]
122446250 (LDB3)
Domain-containing proteins not elsewhere classified [BR:
ccad04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
122446250 (LDB3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LIM
DUF4749
PDZ
PDZ_6
PDZ_2
LIM_FHL2-3_N
Motif
Other DBs
NCBI-GeneID:
122446250
NCBI-ProteinID:
XP_043332128
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All DBs
Position
8:complement(48635302..48694626)
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AA seq
717 aa
AA seq
DB search
MGAAEGRYQCRWHSFPAILRSLSGAPHSPAGQQEAAGVSASMSYSVTLTGPGPWGFRLQG
GKDFNMPLTISRVSPGDKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLSLT
LQKSKRPIPISTAAPPVQSPLPVIPHQKVVANSPANADYQERFNPSALKDSALSTHKPIE
VKGLGGKATIIHAQYNTPISMYSQDAIMDAIAGQAQAQGSDFSGSLPIKDLTVDSASPVY
QAVIKNQNKPEDEADEWARRSSNLQSRSFRILAQMTGTEYMQDPDEEALRRSSTPIEHAP
VCTSQAATPLLPASAQSPAAASPSTASPPPATATAHAATASATAPASSPADSPRPQASAY
SPAVATSPAPAAHTYSEAPAAPAPKPRVVTTASIRPSVYQPVPASTYSPSPGANYSPTPY
TPSPAPAYTPSPTPAYTPSPAPTYSPSPAPAYTPSPAPSYNPTPYSGGPAESASRPPWVT
DDSFSQKFAPGKSTTTVSKQSLPRGAPAYTPPPPAPQVSPLARGTVQRAERFPASSRTPL
CGHCNSIIRGPFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPVC
AKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYVNLFSTKCH
GCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDKPLCKKHAHAINV
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcagcggagggcagatatcagtgtcgatggcattcgttcccagctattcttagg
agcctctcaggagctccacacagcccagccgggcagcaagaggccgccggcgtcagcgcc
agcatgtcttacagcgtgaccctgacggggcctgggccctggggcttccgcctgcagggg
ggcaaggacttcaacatgccgctcaccatctcccgggtgagtcctggggacaaggccgca
cagtcccagctcagccagggtgaccttgtggtggccattgacggcgtcaacacagatacc
atgacccacctggaggcccagaacaagatcaagtctgccagctacaacctgagtctcaca
ctgcagaagtcgaagcgccccattcccatctccacggcagcgcccccggtccagtcccct
ctgccagtgatcccccaccagaaggtggtagccaactctccagccaacgccgactaccag
gaacgcttcaaccccagcgccctgaaggactcggccctgtcgacccacaagcccatcgag
gtgaaggggctgggcggcaaggccaccatcatccacgcgcagtacaacacgcccatcagc
atgtactcccaggacgccatcatggatgccatcgccgggcaggcccaggcccagggcagt
gacttcagtgggagcctccctatcaaagacctcaccgtagacagtgcctctcccgtgtat
caggctgtgattaagaaccagaacaagccggaagatgaggccgacgagtgggcgcgccgc
tcctccaacctacagtctcgctccttccgcatcctggcccagatgacggggacagaatac
atgcaagaccctgatgaagaagctttgcgaaggtcaagcacccctattgagcatgctcca
gtgtgcaccagccaggccgccaccccactgctgcccgcttctgcccagtcgcctgctgct
gcctctcccagcacagcctcgccacccccggccacagccactgcccacgctgccaccgcc
tctgccacagcccctgcctcaagccctgcggacagtccaaggccccaggcctctgcctac
agtcctgctgtggccacctctccagcacctgctgcccatacatacagcgaggccccagct
gcccctgcacccaagccccgggttgtcaccactgccagcatccggccttctgtctaccag
ccagtgcctgcatctacctacagcccatccccgggggccaattacagtccaaccccctac
acgccctcccctgcccctgcctacaccccatcccctacccctgcgtacaccccttccccc
gctcccacctattccccctccccagcaccagcctataccccctcgccagccccaagctat
aatcctacaccctatagtgggggccctgcggagtctgccagccgtcccccatgggtgaca
gacgacagcttctctcagaagtttgcccctggcaagagcaccaccactgtcagcaagcag
agtctgccccgaggggcccctgcctacaccccgccaccaccagctccccaggtgtccccc
cttgccaggggtacggtccagagggccgagcgcttcccagccagcagccggactccgctc
tgtggccactgcaacagcatcatccggggcccctttctggtagccatgggccgttcctgg
catccagaagagttcaactgtgcctactgcaagacctccctggcagatgtatgctttgtg
gaggagcagaacaacgtgtactgtgagcggtgttatgagcagttctttgccccagtctgt
gccaagtgtaacaccaaaatcatgggggaagtgatgcatgccttgaggcagacgtggcat
accacctgcttcgtctgtgcagcctgcaagaagcccttcgggaacagcctcttccacatg
gaagatggggagccctactgtgagaaagactacgtcaatctgttcagcaccaagtgtcac
ggctgcgatttccctgtggaggctggtgacaagtttatcgaagccctggggcatacctgg
catgacacctgcttcatttgcgcagtctgccacgtgaatcttgaggggcagccattctac
tccaagaaggacaaacccctgtgcaagaagcatgcacacgccatcaacgtgtag
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