Cervus canadensis (wapiti): 122446273
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Entry
122446273 CDS
T07554
Name
(RefSeq) LOW QUALITY PROTEIN: collectin-46-like
KO
K10068
pulmonary surfactant-associated protein D
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122446273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccad04131
]
122446273
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
ccad04091
]
122446273
Membrane trafficking [BR:
ccad04131
]
Endocytosis
Phagocytosis
Opsonins
122446273
Lectins [BR:
ccad04091
]
C-Type lectins
Collectins
122446273
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Surfac_D-trimer
Lectin_C
Motif
Other DBs
NCBI-GeneID:
122446273
NCBI-ProteinID:
XP_043332176
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All DBs
Position
8:54186170..54300430
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AA seq
473 aa
AA seq
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MPGPAGREGPSERQGSMGPLGTPGPKGETGPKGPVGAIGPQGPSGAMGPPGLKGDRGDPG
EKGAKGESAFSEVNTLRQRITNLEGEVAYNASGILSPSIGKDMLLLPPSVLLLLTQPWRS
LGAEMEIYSQKTMANACTLVVCSPPEGGLPGHDGQDGREGPQGEKGDPGSPGPAGXAGRP
GPAGTIGLKGDNGSAREPGPKGDPGPPGLPGMPGPAGREGPSGSQGSMGPPGKPGPKGET
GPKGGVGAPGMQGSPGPAGLKGERGAPGETGAPGRAGAAGPEGAIGLQGPSGARGPPGLK
GDRGTPGERGEKGESGLAEVKAVRQQVAVLEGHLRRLQNAFSHYKKAVLFPSGLAVGEKI
FKTAGVVKSYSDAQQVCSEAKGQLASPRSAAENEAVTQLVRVQNKPAYLSMNDNTTEGRF
TYPTGESLVYSNWASGEPNNSDEGKPENCVEIFPEGKWNDVPCSKELLVICEF
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgcctggtccagctgggagagagggcccctcagagaggcaggggagcatgggacctctg
ggcacaccaggccccaaaggagagactgggcccaaagggcctgttggagccatcggtcca
cagggaccttcaggtgccatgggccccccaggactaaaaggggacagaggtgatcctgga
gaaaaaggagcaaagggggagagtgcattttcagaagttaatactctgaggcagcggata
acaaacttagagggagaagtagcgtacaacgcctccggaatactgtctcccagtatagga
aaggacatgcttctcctcccgccctccgtgctgcttctgctcacacagccctggagatcc
ctgggagcagaaatggagatctattcccagaaaacaatggccaacgcctgtaccctggtt
gtgtgtagccccccagagggtggcttgcctggtcatgatggacaagatgggagagaaggt
ccccagggagagaagggggatccaggttcaccaggacctgcaggatgagcagggaggcca
ggaccagctggcaccattgggctgaaaggggacaatggctctgctagagaacctggacca
aagggagaccctggaccacctgggcttccaggcatgcctggtccagctgggagagagggc
ccctcagggagtcaggggagcatgggacctccaggcaaaccaggccccaaaggagagact
gggcccaaaggaggagtcggtgccccaggcatgcagggttccccaggccccgcaggtctc
aaaggagagagaggtgcccccggggagactggagcccctggacgtgctggggcggcaggg
cctgagggagcaataggtctacaggggccttcaggtgccaggggccccccaggactaaag
ggggacagaggtactcctggagaaagaggagaaaagggtgagagtgggcttgcagaggtc
aaggctgtcaggcagcaggtggcagtcttagagggacacctgcgacgcctccaaaatgcc
ttctctcactataagaaagcggtgctcttcccatctggcctggctgtcggggagaagatc
ttcaagacagcaggtgttgtaaaatcatattcagatgcccagcaggtctgcagtgaggct
aagggacagctggcctccccacgctctgcagccgagaacgaggccgtgacacagctggtc
agagtccagaacaagcccgcttacctgagcatgaatgacaacaccacggagggcaggttc
acctaccccacaggggagtcactggtctattccaactgggccagcggggagcccaacaac
agcgatgaaggaaaaccagagaactgtgtggagatctttcctgagggcaagtggaatgac
gtaccctgcagtaaggaactcctcgtgatctgcgagttttga
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