Cervus canadensis (wapiti): 122446274
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Entry
122446274 CDS
T07554
Name
(RefSeq) collectin-46
KO
K10068
pulmonary surfactant-associated protein D
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122446274
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccad04131
]
122446274
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
ccad04091
]
122446274
Membrane trafficking [BR:
ccad04131
]
Endocytosis
Phagocytosis
Opsonins
122446274
Lectins [BR:
ccad04091
]
C-Type lectins
Collectins
122446274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Surfac_D-trimer
Lectin_C
DUF5075
Motif
Other DBs
NCBI-GeneID:
122446274
NCBI-ProteinID:
XP_043332177
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Position
8:complement(54079956..54093488)
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AA seq
371 aa
AA seq
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MLLLPLSVLLLLTQPWRSLGAEMEIYSRKTLANACTLVVCSPPEGGLPGRDGQDGREGPQ
GEKGDPGSPGPAGQAGRPGPAGPIGLKGDNGSAGEPGPKGDPGPPGPPGMPGPAGREGPS
GKQGSMGPPGTPGSKGETGPKGGVGAPGMQGSPGPEGLKGERGAPGEPGAAGRAGAAGPA
GAIGPQGPSGARGPPGLKGDRGTPGERGEKGESGLTEVKAVRQQVAVLEGHLRRLQNAFS
QYKKAVLFPDGLAVGEKIFKTAGAVKSYSDAQQVCREARGQLASPRSAAENEAVAQLVRA
KNNDAFLSMNDISTEGRFTYPTGESLVYSNWANGEPNNNNAGQPENCVQIYSEGKWNDVP
CSTELLVICEF
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgcttctcctcccgctctccgtgctgcttctgctcacacagccctggagatccctggga
gcagaaatggagatctattcccggaaaacactggccaacgcctgtaccctggttgtgtgt
agccccccagagggtggcttgcctggtcgtgatggacaagatgggagagaaggtccccag
ggagagaagggggatccaggttcaccaggacctgcaggacaagcagggaggccaggacca
gctggccccattgggctgaaaggggacaatggctctgctggagaacccggaccaaaggga
gaccctggaccacctgggcctccaggcatgcctggcccggctgggagagagggcccctca
gggaagcaggggagcatgggacctccgggcacaccaggctccaaaggagagactgggccc
aaaggaggagtgggtgccccaggcatgcagggctccccaggccccgaaggtctcaaggga
gagagaggtgcccctggtgagcccggagccgctggacgtgctggggcggcagggcctgct
ggagccataggtccacaggggccttcaggtgccaggggccccccaggactgaagggagac
agaggtactcctggagaaagaggagaaaagggtgagagtgggcttacagaggtcaaggct
gtcaggcagcaggtggcagtcttagagggacacctgcgacgcctccaaaatgccttctct
cagtataagaaagcggtgctcttccctgatggcctggctgtcggggagaagatcttcaag
acggcaggtgctgtaaaatcatattcggatgcccagcaggtctgcagagaggctagggga
cagctggcctcgccacgctctgcagccgagaatgaggccgtggcacagctggtcagagcc
aagaataatgatgctttcctgagcatgaatgacatctccacggagggcaggttcacctac
cccactggggagtcactggtctattccaactgggccaatggggagcccaacaacaataat
gctggccaaccagagaactgtgtgcagatctatagtgagggcaagtggaatgacgtaccc
tgcagtacggaactcctcgtgatctgcgagttttga
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integrated database retrieval system