Cervus canadensis (wapiti): 122446312
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Entry
122446312 CDS
T07554
Symbol
ERCC6
Name
(RefSeq) DNA excision repair protein ERCC-6 isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
122446312 (ERCC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccad03036
]
122446312 (ERCC6)
03400 DNA repair and recombination proteins [BR:
ccad03400
]
122446312 (ERCC6)
Chromosome and associated proteins [BR:
ccad03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
122446312 (ERCC6)
DNA repair and recombination proteins [BR:
ccad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
122446312 (ERCC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
122446312
NCBI-ProteinID:
XP_043332271
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All DBs
Position
8:56543180..56615622
Genome browser
AA seq
1482 aa
AA seq
DB search
MPNERIPDSSQTQEQDCSQSQAVSVSEEGTIKQEKDGDVDLGQRLPSCSSANGPSTSTEG
CLLELPRRGPALLHIDRHQIQAVEPSAQALELQGLGVDVYDQDVLEQGVLQQVDSAIHEA
NRVAQLAEAEKEYRSVLDDLTSCTTSLRQIDKIIEQLGPQAATNKDINRKLDSVKRQKYN
KEQQLKKITAKQKRLQAILGGAEVKVELDHASLEEEDAEAEPSCLGSMLMPAQETAWEEL
VRTGQMTPFGTKIAQKQEKKPRKLMLNEASGFEKYLADQAKLSFERKKQACNKRAAKKAA
ASATPELSSTLRENKPDERGKVLSKTDKRLKKKIKKLQKRALQLQGQVGSLKGKKPWDCD
VRPKAEGDSEGEDSEYLPTEEELEEAVGADLPGEGTGWEQRLVLSRRKRQKKVTVQEMDD
DFFPSSGEEAEATGGGRKVVRCRDDGDEDYYKQRLRRWKKLRLKDKEQSLRLEDDSEESD
AEFDEGFKMPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLS
YSKIRTRGSNYRFEGLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSFTHKKEKL
VRDIAHCHGILITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAITLACKQFRTPHR
IILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKC
ACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYRILN
GEMQIFSGLVALRKICNHPDLYSGGPKTLKGIPDEELGEDQFGYWKRSGKMIVVESLLKI
WHKQGQRVLLFSQSRQMLDILEVFLRAQNYSYLKMDGTTAIASRQPLITRYNEDTSIFVF
LLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEE
KIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTLSSPDTSQSTETSAIFAGTGSDVQ
TPKRHLKRRLQLACGTDQNVPVGKKFPDCKTSANDAMSLEETSVGGSGAEVNAVTSDQGI
PLNDAAQIPHSLTSSERLGEETDTVSRPPESLASHENGDSSDSPRISRTCGTSGEESINE
KESLSDKRESCQVQGEPLWENEQTENNFYKHKSKMKHHVAEETMEKHLGPNQKPKSSKHR
RDAKFEGTRIPHLVKKRQYRRRDNENESEAKERSHDDYVLEKLFRKSVGVHSVMKHDAIM
DGASPDYVLVEAEANRVAQDALKALRLSRQQCLGAASGVPTWTGHRGLAGAAAGKKSRFG
QKRNSSFSVQHPSSASPKEKCQDGAVKKDGKDHASEHFSGKVEDIESSSGALASSSLLAK
MRARNHLILPERLESESGHLPEAAAPLHCSAEHDDLLVEMRNFIAFQAEVDGQASTREIL
REFESKLSASQSCVFRELLRSLCTFHRTSAGEGIWKLKPEYC
NT seq
4449 nt
NT seq
+upstream
nt +downstream
nt
atgccaaatgaaagaatccccgactcaagtcaaactcaggagcaagactgttcacagagc
caggctgtcagtgtcagtgaagaggggacaatcaagcaggagaaggatggcgacgtggac
ctggggcagagactcccctcttgttcctctgctaatggaccctccacttccaccgaaggg
tgtctcttggaacttcccaggagagggccagccctgctgcacatcgacagacatcagatc
caggcggtggagcccagcgcacaggccctggagctgcagggcttgggtgtagatgtctac
gaccaggatgtgctggagcaaggggtgctccagcaggtggacagcgccatccatgaggcc
aaccgcgtggcccagcttgctgaggcagagaaggagtatcggtcagtcctggacgacctc
acgtcatgtacgacatccctaagacagattgataaaattattgaacaacttggccctcaa
gctgccaccaacaaagacatcaacaggaaactagattctgtaaaacgacagaagtataac
aaggaacaacagctgaagaagatcacagcaaaacaaaagcgactccaggccatccttgga
ggagcagaggtaaaagttgaactagatcatgccagtctggaggaggaggatgcagaagcg
gagccatcctgccttggcagcatgctcatgcccgctcaggagaccgcttgggaagagctc
gtccgcactggccagatgacaccttttggtaccaagatcgctcagaagcaggagaaaaaa
cccagaaaactaatgctcaatgaagcgtcaggctttgaaaagtatttggcagatcaagcg
aaactgtcctttgaaagaaagaagcaagcttgtaataaaagagcagctaaaaaagctgca
gcctcggccactcctgagctgagctcaacgctccgtgaaaacaaaccagacgagagaggc
aaagttctatcgaaaacagataaacgcctgaaaaaaaaaatcaagaaactccagaagagg
gctcttcagctccaggggcaggtgggatcgctaaagggaaagaaaccctgggattgtgat
gtgagaccaaaggcagagggggactctgaaggtgaagactctgagtacttgcccacggag
gaggagctggaggaggcagtgggtgccgacctgcccggggaaggtactggctgggagcag
aggctggtgctcagtcgccggaaacggcagaagaaagtcactgtgcaggagatggatgat
gacttttttccaagttctggggaagaggctgaagccacgggaggaggtcggaaggtagtg
agatgccgagacgatggagatgaagattattataagcaacgattaaggagatggaagaaa
ctgagactgaaggacaaagagcagagtttgaggcttgaagatgattctgaggaaagcgat
gctgaatttgacgaaggttttaaaatgccgggttttctgttcaaaaaactttttaagtac
cagcagacaggtgttaggtggctgtgggaattgcactgccagcaggcaggagggattctg
ggagacgaaatgggattgggcaagaccatccagataattgccttcttggcaggtctgagc
tacagcaagatcaggactcgtggttcaaattacaggttcgaggggttgggtccgaccata
attgtctgtccaacaacggtgatgcatcagtgggtgaaggaatttcacacgtggtggcct
ccattcagagtggcaattctgcacgaaacggggtcctttacccacaaaaaggagaaacta
gttcgagacattgctcattgtcacgggattttgatcacttcttactcctacattcgactg
atgcaagatgatattagcaggcatgactggcactatgtgatcttggatgagggacacaaa
attcgaaatccaaatgctgccatcacccttgcttgcaaacagtttcgcacgcctcatcgc
atcatcctgtctggctcaccaatgcagaataacctccgagaactgtggtctctctttgac
ttcatcttccctggaaagctgggtacattgcctgtgttcatggagcagttctcagtcccc
atcaccatggggggttattcaaacgcctccccggtacaggttaaaactgcttataagtgt
gcgtgcgtcttacgagataccataaatccatacttactgcggagaatgaagtcagatgtc
aaaatgagcctttctttgccagataaaaacgaacaggtcttgttttgccgtcttacagat
gaacaacataaagtctaccaaaatttcattgattccaaagaagtttacaggattctcaat
ggagagatgcagattttctctggacttgtagccctaagaaaaatctgcaatcaccctgat
ctctattctggaggccccaagactcttaaaggcattccagacgaggaactaggggaagat
cagtttggatactggaaacgttctgggaaaatgatagttgttgagtccttgctgaaaata
tggcacaagcagggccaacgagtgttgctgttttctcagtccagacagatgttagacatc
cttgaagtatttctcagagcccaaaactattcctatctcaagatggatggcaccacggcg
atagcttccagacaaccactgattacaagatacaatgaggacacatccatatttgtgttt
cttctgaccactcgggtgggtggcctaggagtcaacctgacgggcgcaaaccgcgtcatc
atctatgatcccgactggaacccaagcacagacacgcaggcccgggagcgagcgtggagg
ataggccagaagaagcaggtgacggtgtataggcttctaaccgcaggcaccattgaagaa
aagatttaccaccgacaaatcttcaagcagtttttgacaaatagagtgctaaaagatcca
aagcaaagacgatttttcaagtccaatgatctttatgagctgtttactctgagtagtcct
gatacatcccagagcactgaaacaagtgctatttttgcaggaactggttcagatgttcag
acacccaaacgccatttaaaaagaagacttcagctggcctgtggaacagaccagaatgtc
ccagtgggcaaaaagttccctgattgtaagacatctgcaaatgatgccatgtcattggaa
gagacatctgtaggaggatcaggcgctgaagtgaatgcagtaacttctgaccaaggcatt
cctttgaatgatgccgctcagatacctcatagtctaaccagcagtgagaggcttggagaa
gagacagatacagtctccagaccaccggagtccttagcgagtcatgaaaacggggacagt
tcagattctccaagaatcagcagaacgtgtgggacgtctggtgaggaaagcatcaatgaa
aaggagagtctttctgataaaagagaaagctgccaggttcagggagaacctctttgggag
aatgagcaaacggaaaataatttttataaacacaaatcgaaaatgaaacatcatgtggca
gaagagaccatggagaaacacctggggccgaatcaaaagccgaagagctctaagcaccgc
agagacgccaagtttgagggaactcgaattccacacctggtgaagaagaggcagtaccgg
aggcgagacaatgaaaatgagagcgaggccaaggaacgcagccatgacgactacgtcctg
gagaagcttttcagaaaatcagtgggtgtgcacagtgtcatgaagcacgacgccatcatg
gatggagccagtccagactatgtcctggtggaggcggaggccaaccgcgtggctcaggat
gccctcaaagcactgagactctctcggcagcagtgtctgggagcagcgtctggtgttccc
acttggactggccacagagggcttgctggtgcagcagcgggaaaaaagagcagattcggt
cagaaaaggaactccagtttctctgtgcagcatccctcttcagcatctccaaaggaaaaa
tgccaggatggtgctgtgaagaaggatggaaaagatcatgcgtcagagcattttagtgga
aaagttgaagacatagagtcttcatccggggccctcgcttcatcctcactcttggctaaa
atgagagctagaaaccacctgattttgccagagcgcttagaaagtgaaagcgggcacctc
ccagaagctgctgctccgctgcactgcagcgcagaacacgatgaccttctggtggaaatg
agaaacttcattgcctttcaggccgaagttgatggccaggccagcacccgggagatactg
cgggagttcgagtccaagttatcagcatcacagtcttgtgtctttagagaactcttgaga
agtctgtgcacttttcatagaacttctgctggcgaaggcatttggaaactcaagccagag
tactgctga
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integrated database retrieval system
