Cervus canadensis (wapiti): 122446384
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Entry
122446384 CDS
T07554
Symbol
ZSWIM8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccad04121
]
122446384 (ZSWIM8)
Ubiquitin system [BR:
ccad04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
122446384 (ZSWIM8)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
Motif
Other DBs
NCBI-GeneID:
122446384
NCBI-ProteinID:
XP_043332447
LinkDB
All DBs
Position
8:complement(63935398..63949642)
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AA seq
1904 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTGGGGG
GGSGGTRMRDGLVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAFWSFPENEEDI
RLYSCLANGSADEFQRGDQLFRMRAVKDPLQIGFHLSATVVPPQMVPPKGAYNVAVMFDR
CRVTSCSCTCGAGAKWCTHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLI
SELPQQILPTAQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLTDNIKK
TLHKFCGPSPVVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGVWNLLSIVREMFKR
RDSNAAPLLEILTDQCLTYEQITGWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMC
DEMVTLWRLAVLDPALSPQRRRELCVQLRQWQLKVIENVKRGQHKKTLERLFPGFRPAVE
ACYFNWEEAYPLPGVTYSATDRKLALCWARALPPRPGASRTGGLEESRERPRPLPAEPAV
RPKEPGAKRKGLGEGVPASQRGPRRLSAEGGDKALHKMGPGGGKAKTLGGAGCGGKGSVG
SGSKRRLSSEDSSLEPDLAEMSLDDSSLALGAEASTFGGFPESPPPCPHPGGSRGPSTFL
PEPPDTYEEDGGVYFSEGPEPPTASAGPPGLLPRELCTRDDLPSTDESGNGLPKTKEAAP
VVGEEDDDYQAYYLNAQDGAGGEEEKAEGGAGEEHDLFAGLKPLEQESRMEILFACAEAL
HAHGYSSEASRLTVELAQDLLANPPDLKVEPPPAKGKKNKVSTSRQTWVATNTLTKAAFL
LTVLSERPEHHNLAFRVGMFALELQRPPASTKALEVKLAYQESEVATLLKKIPLGPSEMS
TVRCRAEELREGTLCDYRPVLPLMLASFIFDVLCTPVVSPTGSRPPSRNWNNEMPGDEEL
GFEAAVAALGMKTTVSEAEHPLLCEGTRREKGDLALALMITYKDDQAKLKKILDKLLDRE
SQTHKPQTLSSFYSSSRPATASQRSPSKHGGPSAPGALQPLTSGSAGPAQPGSVAGAGPG
PTEGFTEKNVPESSPHSPCEGLPPEAALTPRPEGKVPSRLALGSRGGYNGRGWGSPGRPK
KKHTGMASIDSSAPETTSDSSPTLSRRPLRGGWAPASWGRGQDSDSISSSSSDSLGSSSS
SGSRRASASGGARAKTVEVGRYKGRRPESHAPHVPNQPSEAAAHFYFELAKTVLIKAGGN
SSTSIFTHPSSSGGHQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQA
MEIGSAALTILVECWDGHLTPPEVASLADRASRARDSNMVRAAAELALSCLPHAHALNPN
EIQRALVQCKEQDNLMLEKACMAVEEAAKGGGVYPEVLFEVAHQWFWLYEQTAGGSSTAR
EGATSCSASGIRAAGEAGRGLPEGRGGPGTEPVTVAAAAVTAATVVPVISVGSSLYPGPG
LGHGHSPGLHPYTALQPHLPCSPQYLTHPAHPAHPMPHMPRPAVFPVASSAYPQGVHPAF
LGAQYPYSVTPPSLAATAVSFPVPSMAPITVHPYHTEPGLPLPTSVACELWGQGTVSTVH
PASTFPAIQGASLPALTTQPSPLVSGGFPPPEEETHSQPVNPHSLHHLHAAYRVGMLALE
MLGRRAHNDHPNNFSRSPPYTDDVKWLLGLAAKLGDRHGDAAAAEPCSRPQPPACPGLPP
AGAALPTGVHAVHPPPPDSPDPRRLRRLCECHPQCSQRLLPDTHGYDAVQRHPAESQAQQ
TDQGAVAAGLTRDDHLLPLSLAPLGPYTGTQACGYGGPSPRGNESWLDRSSPLSSPVAQT
GSCSWAVAWGQDASDPRSLGLGETALSGSGHWVASGIYLAFINI
NT seq
5715 nt
NT seq
+upstream
nt +downstream
nt
atggagctgatgttcgccgagtgggaggacggagagcgcttctctttcgaggattcggac
cgctttgaggaggattcgctctgttccttcatctccgaggctgagagcctctgccagaac
tggcggggatggcgcaaacagtcagcggggcccaattcccccactggcggcggtggcgga
ggtggcagtggcggtaccagaatgcgagatggactggtgatcccactggtggagctgtca
gcaaagcaggtggcatttcatatcccctttgaagtggtggagaaagtttaccccccagtg
cctgagcagctacaactccgaattgctttttggagcttccctgagaatgaagaagatatt
cgactctattcctgcctggccaacggcagtgcggatgagttccagcgaggggatcagctg
ttccgcatgagggctgtgaaggaccctctgcagatagggttccacctgagtgctacagtg
gtgccacctcagatggtgccccccaaaggagcctacaacgtggctgtgatgtttgaccgc
tgccgggtcacttcctgcagctgcacctgtggtgctggggccaaatggtgcacccatgtc
gtggccctctgcctcttccgcatccacaacgcttctgcagtctgccttcgggcccccgtg
tcagagtccctgtctcggctgcagagggaccagctgcagaaatttgctcagtacctcatc
agtgagctcccacagcagatcctccccacagcccaacgtctcctggatgaactcctctcc
tcccagtcaacagccatcaatacagtgtgtggagccccggaccccacagcaggaccctcc
gcctccgaccagagtacatggtatttggatgaatcgacactaaccgacaacatcaagaag
acactgcacaagttctgcggcccctcccctgtggtgttcagtgatgtgaactccatgtat
ctgtcttccacggagcctccggccgccgcggaatgggcatgtctgctgcgccctctgagg
ggccgcgagccagagggtgtctggaacttgcttagcatcgtgcgggagatgttcaagcga
agggacagtaatgctgcccccttgttggaaatcctcactgaccagtgcctcacctatgag
cagataacaggctggtggtacagcgtacgcacctcagcctctcacagcagtgccagtggg
cacacaggccggagcaatgggcagtccgaggtggcggcccatgcctgtgccagcatgtgt
gacgagatggtcaccttatggagattagccgtgctggaccccgcgctcagccctcagcgc
cgccgggaactgtgtgtgcagctgcgccagtggcagctgaaggtgattgagaacgtgaag
cggggacagcacaagaagaccctggagcggctcttccctggcttccggccggcggtggag
gcctgctacttcaactgggaagaggcctacccactgcccggtgtcacctacagcgccact
gaccggaagctggccctgtgctgggcccgagccctgccccctcggccaggcgcctcacgc
actgggggcctggaagaatcccgggagcggccccggcctcttcctgccgagccagctgtg
cggcccaaggagccgggggccaaacgcaagggattgggtgagggggtccccgcatcacag
cggggtccccgccgcctctcggctgaggggggagataaggcactgcataagatgggtcca
ggtgggggcaaagccaaaacactgggtggggctggctgtgggggcaagggctcagtgggc
agtgggagcaagcggcggctgagcagtgaggacagctccctggagccggatctggctgag
atgagcctggacgacagcagcctggccctgggtgcagaggccagcaccttcggtggattc
cctgagagcccgccaccttgcccccaccctggtggctcacgaggcccttcaaccttcctt
cctgaacctccagatacttacgaagaagatggtggcgtgtacttctcagaagggcctgag
cctcccacagcctctgctggcccccctggcctgttgcccagggagctctgtacccgggac
gacctcccttccacagacgagagtggcaatggactccctaaaaccaaagaggcagcccct
gtggttggcgaggaggatgacgactaccaggcatactatctgaatgcccaggatggggct
gggggcgaggaagagaaggctgagggtggggctggggaggagcacgacctgtttgctgga
ctgaagccgctggagcaggagagccgcatggagatactgtttgcctgtgctgaggccttg
catgcacatggctacagcagtgaggcctcccgcctcactgtggaacttgcccaggacctg
ctagccaacccgcctgacctcaaggtagagccgccccctgccaagggcaagaagaataag
gtatctacaagccgtcagacctgggtggctacaaacacactgaccaaggcagctttcctg
ttgacagtgctgagtgagcgtccagagcaccacaacctggccttccgagtgggcatgttt
gccttggagctccagcggcccccagcttctaccaaggccttggaggtgaagctggcgtat
caggagtctgaggtggccactctgcttaagaagatccctctgggtccaagtgagatgagt
actgtgcgctgccgggcagaggaacttcgtgaggggacactctgtgattatcggccagtt
ttgcctctcatgttggccagtttcatctttgatgttctttgtactccagtggtttctccc
acgggttcccgacccccaagtcgcaactggaacaacgagatgcccggggacgaggagctg
ggatttgaagcagcagttgctgccttgggtatgaagacaacagtgagtgaggcagagcat
cccttgctatgtgaaggcacacgtcgggagaagggtgacctggcactggcactaatgatc
acttacaaagatgaccaggccaaactcaaaaagatcttagacaaactcttggaccgagag
agccagacgcataaaccacagacactgagttcgttctattcatccagccgcccggccaca
gccagccagaggtctccttcaaagcatgggggcccatctgccccaggggccctgcagcct
ctgacctcaggctctgcagggcctgctcagccagggagtgtggcaggggctgggccaggc
cccactgagggcttcacagagaagaatgtgcctgagagttccccacattccccctgtgag
ggtcttccacctgaagcagctctgacgccaaggccagaggggaaggttcccagccgcctg
gcacttggcagccgtggaggctacaacggacggggctggggctcaccagggcggcctaag
aagaagcacacaggcatggccagcattgacagcagcgcccctgaaacaacgtcggatagc
tccccaaccttgagcaggaggccgctgcgagggggctgggcccccgcctcctggggtcga
ggacaggacagtgacagcattagcagctcttcctcagactcccttggctcctcgtcctcc
agtggaagtcgccgggccagtgctagtggaggggcccgggcgaagactgttgaagttggc
aggtacaagggccgccgtcccgagagtcatgccccccatgtacccaatcagccatcagag
gcagctgcacacttctacttcgagctggcgaagacagtgctgatcaaggcagggggcaac
agcagcacttccattttcacacacccatcttcctcagggggccaccagggtcctcaccgt
aacctgcacctttgcgcctttgagattgggctttatgcccttggcctgcacaactttgtt
tctcccaactggctctcacgtacttactcttcccacgtttcctggattacaggccaggca
atggagatcggcagtgcagccctgactatcctggtggaatgctgggatgggcacctgacg
ccccctgaggttgcgtccctggctgacagggcgtcacgggcacgagactccaacatggtg
agggcagcggcggaactcgccctaagctgcctgcctcatgcccatgcgttgaaccccaat
gagatccagcgggccctggtgcagtgcaaggagcaggataacctgatgttggagaaggcc
tgcatggcagtggaagaggcggctaagggtgggggcgtataccccgaagtgttgtttgag
gttgctcaccagtggttctggctatatgagcaaacagcaggtggctcatccacagcccgt
gaaggggctacaagctgtagtgccagtgggatcagggcagctggggaggctgggcggggg
ctgcctgagggcagggggggcccagggactgagccggttacagtggcggcggcagcagtg
acagcagccacggtggtgccagtcatctcggtggggtccagcttatatccaggtccagga
ctggggcatggtcattcccctggcctgcacccctacactgctctacagccccacctgccc
tgcagccctcaatacctcacccacccagctcaccccgcccaccccatgcctcatatgccc
cggcctgccgtcttccctgtggccagctctgcatacccgcagggtgtgcatcctgcattc
ctaggggctcagtacccttactcggtgactcccccctcacttgctgccactgctgtgtct
ttccccgtcccttccatggcacccatcacagtacatccctaccacacagagccagggctc
ccactgcccaccagtgtggcctgtgagttgtggggacagggaacagtgagcactgtccat
ccagcttccacgtttccagccatccagggtgcctcactgcctgccctgaccacacagccc
agccctctggtgagcgggggttttccaccacccgaggaggagacccacagccagcctgtc
aacccacacagcctacaccacctgcacgctgcctaccgtgtcggaatgctggcactggag
atgctgggtcgccgggcacacaacgatcaccccaacaacttctctcgctcccctccctac
actgatgatgtcaaatggttgctggggctggcggcaaagctgggagatcgtcatggagac
gctgcagcggctgagccctgctcacgcccacaaccacctgcgtgccccggccttccacca
gctggtgcagcgctgccaacaggcgtacatgcagtacatccaccaccgcctgattcacct
gacccccgccgactacgacgactttgtgaatgccatccgcagtgctcgcagcgccttctg
cctgacacccatgggtatgatgcagttcaacgacatcctgcagaatctcaagcgcagcaa
acagaccaaggagctgtggcagcgggtctcactcgagatgaccaccttctccccctgagt
ctggcccccctagggccctatacagggacacaggcctgtggctatgggggcccctcacca
agggggaatgagtcttggctggacagatcatccccactcagttccccagtagcccagact
ggcagctgctcttgggctgtagcttggggccaagatgcctcagaccctagaagcctaggg
ttaggggagacagccctgtctgggagcgggcattgggtggcctctggtatttatttggca
tttataaatatataa
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