Cervus canadensis (wapiti): 122446698
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Entry
122446698 CDS
T07554
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122446698 (TAF5L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccad03021
]
122446698 (TAF5L)
03036 Chromosome and associated proteins [BR:
ccad03036
]
122446698 (TAF5L)
Transcription machinery [BR:
ccad03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
122446698 (TAF5L)
Coactivators
SAGA/TFTC/STAGA complex
122446698 (TAF5L)
Chromosome and associated proteins [BR:
ccad03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
122446698 (TAF5L)
STAGA complex
122446698 (TAF5L)
TFTC complex
122446698 (TAF5L)
SAGA complex
122446698 (TAF5L)
SLIK complex
122446698 (TAF5L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
TFIID_NTD2
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
RMC1_N
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_Nup120_160
Beta-prop_WDR19_1st
WD40_RFWD3
PEP5_VPS11_N
PROPPIN
eIF2A
WD_LRWD1
Beta-prop_IP5PC_F
Ge1_WD40
Nbas_N
Mala_s_1-like
vATP-synt_AC39
Motif
Other DBs
NCBI-GeneID:
122446698
NCBI-ProteinID:
XP_043333122
LinkDB
All DBs
Position
8:91102924..91130566
Genome browser
AA seq
596 aa
AA seq
DB search
MFPTLWVMKRVRTEQIQMAVSCYLKRRQYGDADGPLKQGLRLSQSTEEMAASLAVQSESG
CANIVSAAPCQAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLNLVQNSPK
STVESFYSRFHGMFLQNASQKDVIEQLQTTQTIQDILSNFRLRAFLDNKYVVRLQEDSYN
YLLRYLQSDNNTALCRVLAWHIHLDVQPAKRTDYQLYASGGSSRGEGGGLEPADVPAPIL
QNEAALELLQESIKRVKDGPPSLTTICFYAFYNTEQLLNTAEVSPDSKLLAAGFDNSCIK
LWSLRSKKLKSEPHQVDVSRIHLACDILEEEDDEDDNAGTEMKVLRGHCGPVYSTRFLAD
SSGLLSCSEDMSIRYWDLGSFTNTVRYQGHAYPVWDLDISPHSLYFASGSHDRTARLWSF
DRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLS
LAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNS
VRVWDIRSAHCSTPADGSSSELVGVYTGQMSNVLSVQFMACNLLLVTGITQESQEH
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgttccctaccctatgggtcatgaaacgggtccgcaccgagcagatccagatggccgtg
tcctgctacctcaaacgccggcagtacggggatgcggacggcccactgaagcaaggcctg
cggctgtcgcagagtaccgaggagatggctgccagcctcgcagtccaatcagaatctggt
tgtgccaacatagtgtccgcagccccttgccaggcagagccccagcagtatgaagtacag
ttcggacggctgcggaattttctcaccgattctgactcccagcacagccacgaagtgatg
cctctcctctaccctctctttgtctacctccatctcaacctggtccagaacagtccgaag
agcacagtggaaagcttttacagccgcttccatggaatgtttctgcagaacgccagccag
aaggatgtcatcgagcagctccagaccacacagaccatccaggacatcctgtctaacttc
cggctgcgagccttcctggacaacaagtacgtggttcgtctgcaggaagacagctacaac
taccttctccgctacctccagagtgacaacaacaccgcgctgtgcagggtcctcgcctgg
cacatccacctggacgtgcagcccgccaagaggacggactaccagctctacgccagcggg
ggctcttcccgcggcgagggcggtggcctggagcccgccgacgtgccagcgcccatcctg
cagaatgaggccgcgctggagctcctgcaggagagcatcaagcgcgtcaaggacggcccc
ccctcgctcaccaccatctgcttctacgccttctacaacacagagcagctgctgaacact
gcagaggtctccccggacagcaagctgctcgcagcaggctttgacaactcctgtataaaa
ctgtggagtctgcgctccaaaaagttaaagtcagaaccccatcaagtagacgtgtcccgc
atccacttggcttgtgatatcctagaggaggaggatgacgaggacgacaacgcgggcacg
gagatgaaggtcctgcggggacactgcgggccagtgtacagcaccaggttcctcgcagac
agctcagggctgctctcctgctccgaagacatgtccatcaggtactgggacctgggcagc
ttcaccaacaccgtgcggtaccagggccacgcctaccccgtgtgggacctggacatcagc
ccgcacagcctgtactttgccagcgggtcccacgaccgcacggcccggctctggtcgttt
gatcggacgtacccactgcgaatctacgctgggcacctggcagacgtggactgcgtcaag
ttccaccccaattcaaactacttagccacgggctcgaccgacaagacggtgcggctgtgg
agcacccagcagggaaactcagtgaggctcttcacgggccaccgcggccctgtgctctcc
ctggccttttcccccaacggtaagtacctggcatctgcgggcgaggaccagcggctgaag
ctgtgggacctggcgtccgggaccctctacaaagagctacggggccacacggacaacatc
accagcctgaccttcagcccggacagcagcctgatcgcgtccgcatccatggacaactct
gtgcgcgtctgggacatcagaagcgcgcactgcagcacccccgcggacggctcgtccagc
gagctcgtgggcgtctataccggccagatgagcaatgttctgagcgtacagtttatggct
tgcaacctcctgctggtgaccggaatcacacaagaaagtcaggaacattga
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integrated database retrieval system
