Cervus canadensis (wapiti): 122447072
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Entry
122447072 CDS
T07554
Symbol
NBEA
Name
(RefSeq) neurobeachin isoform X1
KO
K24183
neurobeachin
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccad04131
]
122447072 (NBEA)
Membrane trafficking [BR:
ccad04131
]
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
122447072 (NBEA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
Beta-prop_IFT122_1st
Laminin_G_3
Neurobeachin
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WDR55
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_WDHD1_1st
DUF4800
Beta-prop_WDR90_POC16_2nd
PIGA
Motif
Other DBs
NCBI-GeneID:
122447072
NCBI-ProteinID:
XP_043333342
LinkDB
All DBs
Position
9:complement(73686256..74330763)
Genome browser
AA seq
2967 aa
AA seq
DB search
MASEKPGPGPGLEPQPVGLIAVGAGGGGGGGSGGGGSGGSGMGELRGASGSGSVVLPAGM
INPSVPIRNIRMKFAVLIGLIQVGEVSNRDIVETVLNLLVGGEFDLEMNFIIQDAESITC
MTELLEHCDVTCQAEIWSMFTAILRKSVRNLQTSTEVGLIEQVLLKMSAVDDMIADLLVD
MLGVLASYSITVKELKLLFSMLRGESGIWPRHAVKLLSVLNQMPQRHGPDTFFNFPGCSA
AAIALPPIAKWPYQNGFTLNTWFRMDPLNNINVDKDKPYLYCFRTSKGVGYSAHFVGNCL
IVTSLKSKGKGFQHCVKYDFQPRKWYMISIVHIYNRWRNSEIRCYVNGQLVSYGDMAWHV
NTNDSYDKCFLGSSETADANRVFCGQLGAVYVFSEALNPAQIFAIHQLGPGYKSTFKFKS
ESDIHLAEHHKQVLYDGKLASSIAFTYNAKATDAQLCLESSPKENASIFVHSPHALMLQD
VKAIVTHSIHSAIHSIGGIQVLFPLFAQLDNRQLNDSQVETTVCATLLAFLVELLKSSVA
MQEQMLGGKGFLVIGYLLEKSSRVHITRAVLEQFLSFAKYLDGLSHGAPLLKQLCDHILF
NPAIWIHTPAKVQLSLYTYLSAEFIGTATIYTTIRRVGTVLQLMHTLKYYYWVINPADSS
GITPKGLDGPRPSQKEIISLRAFMLLFLKQLILKDRGVKEDELQSILNYLLTMHEDENIH
DVLQLLVALMSEHPASMIPAFDQRNGIRVIYKLLASKSESIWVQALKVLGYFLKHLGHKR
KVEIMHTHSLFTLLGERLMLHTNTVTVTTYNTLYEILTEQVCTQVVHKPHPEPDSTVKIQ
NPMILKVVATLLKNSTPSAELMEVRRLFLSDMIKLFSNSRENRRCLLQCSVWQDWMFSLG
YINPKNSEEQKITEMVYNIFRILLYHAIKYEWGGWRVWVDTLSIAHSKVTYEAHKEYLAK
MYEEYQRQEEENIKKGKKGNVSTISGLSSQTTGAKGGMEIREIEDLSQSQSPESETDYPV
STDTRDLLMSTKVPDDILGNSDRPGSGVHVEVHDLLVDIKAEKVEATEVKLDDMDLSPET
LVGGENGALVEVESLLDNVYSAAVEKLQNNVHGSVGIIKKNEEKDNGPLITLADEKDELP
NSSTSFLFDKIPKQEEKLLPELSSNHIIPNIQDTQVHLGVGDDLGLLAHMTGSVDLTCTS
SIIEEKEFKIHTTSDGMSSISDRDLASSSKGLEYAEMTTTTLETESSGSKIVPNVDAGSI
ISDTERSDDGKESGKEIRKIQTTATTQAVQGRSITQQDRDLRVDLGFRGMPMTEEQRRQF
SPGPRTTMFRIPEFKWSPMHQRLLTDLLFALETDVHVWRSHSTKSVMDFVNSNENIIFVH
NTIHLISQMVDNIIIACGGILPLLSAATSPTGSKTELENIEVTQGMSAETAVTFLSRLMA
MVDVLVFASSLNFSEIEAEKNMSSGGLMRQCLRLVCCVAVRNCLECRQRQRDRGNKSSLG
SSKPQEAPQGVTATAASKTPLENVPGNLSPIKDPDRLLQDVDINRLRAVVFRDVDDSKQA
QFLALAVVYFISVLMVSKYRDILEPQRETARTGSQPGRNIRQEINSPTSTVVVIPSIPHP
SLNHGFLAKLIPEQSFAHSFYKETPAAFPDTVKEKETPTPGEDIHLESSIPHTDSGIGEE
QVANILNGAELETSTGPDAMSELLSTLSNEVKKSQESLTENPSEILKPAPSISSISQTKG
INVKEILKSLVAAPVEIAECGPEPIPYPDPALKREAQAILPMQFHSFDRSVVVPVKKPPP
GSLAVTTVGATAAGSGLPAGSTSNIFAATGATPKSMINTTGAVDSGSSSSSSSSSFVNGA
TSKNLPAVQTVAPMPEDSAENMSITAKLERALEKVAPLLREIFVDFAPFLSRTLLGSHGQ
ELLIEGLVCMKSSTSVVELVMLLCSQEWQNSIQKNAGLAFIELINEGRLLCHAMKDHIVR
VANEAEFILNRQRAEDVHKHAEFESQCAQYAADRREEEKMCDHLISAAKHRDHVTANQLK
QKILNILTNKHGAWGAVSHSQLHDFWRLDYWEDDLRRRRRFVRNAFGSTHAEALLKAAIE
YGTEEDMVKSKKTFRSQAIVNQNAETELMLEGDDDAVSLLQEKEIDNLAGPVVLSTPAQL
IAPVVVAKGTLSITTTEIYFEVDEDDPAFKKIDTKVLAYTEGLHGKWMFSEIRAVFSRRY
LLQNTALEVFMANRTSVMFNFPDQATVKKVVYSLPRVGVGTSYGLPQARRISLATPRQLY
KSSNMTQRWQRREISNFEYLMFLNTIAGRTYNDLNQYPVFPWVLTNYESEELDLTLPGNF
RDLSKPIGALNPKRAVFYAERYETWEDDQSPPYHYNTHYSTATSTLSWLVRIEPFTTFFL
NANDGKFDHPNRTFSSVARSWRTSQRDTSDVKELIPEFYYLPEMFVNSNGYNLGVREDEV
VVNDVDLPPWAKKPEDFVRINRMALESEFVSCQLHQWIDLVFGYKQRGPEAVRALNVFHY
LTYEGSVNLDSITDPVLREIPEAYFIRDPHTFLLTKDFIKAMEAQIQNFGQTPSQLLIEP
HPPRSSAMHLCFLPQSPLMFKDQMQQDVIMVLKFPSNSPVTHVAANTLPHLTVPAVVTVT
CSRLFAVNRWHNTVGLRGAPGYSLDQAHHLPIEMDPLIANNSGVNKRQITDLVDQSIQIN
AHCFVVTADNRYILICGFWDKSFRVYSTETGKLTQIVFGHWDVVTCLARSESYIGGDCYI
VSGSRDATLLLWYWSGRHHIIGDNPNSSDYPAPRAVLTGHDHEVVCVSVCAELGLVISGA
KEGPCLVHTITGDLLRALEGPENCLFPRLISVSSEGHCIIYYERGRFSNFSINGKLLAQM
EINDSTRAILLSSDGQNLVTGGDNGVVEVWQACDFKQLYIYPGCDAGIRAMDLSHDQRTL
ITGMASGSIVAFNIDFNRWHYEHQNRY
NT seq
8904 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgagaagccgggcccgggcccggggctcgagcctcagcccgtggggcttatc
gccgtcggggccggcggcggaggcggcgggggcagcggcggcggtggcagcgggggcagc
gggatgggggagttgaggggggcgtccggctccggctcggtggtgctgcccgcggggatg
attaacccttcggtgccgatccgcaacatccggatgaaattcgcagtgttgattggactc
atacaggtcggagaggtcagcaacagggacatcgtggagacggtgctcaacctgctggtt
ggtggagaatttgacttggagatgaactttattatccaagatgctgaaagcataacgtgc
atgacagagcttttggaacactgtgatgtcacatgtcaagcagaaatatggagcatgttt
acagccatcctgcgaaaaagtgttcggaatttacagactagtacagaagttgggctcatt
gagcaagtattgctgaaaatgagtgctgtagatgacatgatagcagatcttctagttgat
atgttgggggttcttgccagctacagcatcactgtcaaggaattgaagcttttgttcagc
atgcttcgaggagaaagtggaatctggccaaggcatgcagtaaaattactatccgttctt
aatcagatgccacaaagacatggtcctgatacttttttcaatttccctggttgtagtgct
gcggcaattgcattgcctcctattgcaaagtggccttatcagaatggcttcaccctaaat
acttggtttcgtatggatccattaaataacattaatgttgataaggataaaccttatctt
tattgttttcgtactagcaaaggagttggttactctgctcattttgttggcaattgtttg
atcgttacatcactgaagtccaaaggaaaaggttttcagcactgtgtgaaatatgatttt
caaccacgcaagtggtacatgatcagcattgtccacatttacaatcgttggagaaacagt
gaaattcggtgttatgttaatggacagctggtatcatatggtgatatggcttggcatgtt
aacacaaatgatagctatgacaagtgctttctcggatcttcagaaactgctgatgcaaat
agggtattctgtggtcaacttggtgccgtgtatgtgttcagtgaagccctcaaccctgca
cagatatttgcaattcatcagttaggacctggatataagagcaccttcaagtttaagtct
gaaagtgatattcatttagcagaacatcataaacaggttctgtatgatgggaaacttgca
agtagtattgcatttacatataatgctaaagccactgatgctcaactatgcctggaatca
tcaccaaaggaaaacgcatcgatctttgtgcattccccacatgctcttatgctccaggat
gtaaaagctatagttacacattcaattcatagtgcaattcattcaattggagggattcaa
gtgcttttcccactttttgcacaactagacaaccggcaactcaatgacagtcaagtggaa
accactgtctgtgctactcttttggcattcctggttgaactacttaaaagttcagtagcc
atgcaagaacagatgctgggtggaaaaggctttttagtcattggctacttacttgaaaag
tcatcaagagttcatataactagagctgtcctggagcaatttttatcgtttgcaaaatac
cttgatggtttatctcatggagcacctttgctgaagcagctttgtgatcacattttattc
aacccagccatctggatacatacacctgcaaaggttcagctttccctatacacttatttg
tctgctgaatttattggaactgctaccatttacactaccatacgcagagtaggaacagta
ttacagcttatgcatacactaaaatattactactgggtcattaatcctgctgacagtagt
ggcattacacccaaaggtttagatggtccccggccatcacaaaaagaaattatatcactg
cgggcatttatgttacttttcctgaaacagcttatactaaaggatcgaggggtcaaggaa
gatgaacttcagagtatattaaattacctgcttacaatgcatgaggatgaaaatattcat
gatgtgttacagttactagtggctttaatgtcagaacacccagcatcaatgataccagcg
tttgatcaaagaaatggaataagggtaatctacaaattattggcctctaaaagtgaaagt
atttgggttcaagctctgaaggttctgggatattttctgaagcatttaggtcacaaaaga
aaagttgaaatcatgcatacccacagccttttcactcttcttggagaaaggctgatgttg
catacaaacactgtgactgtcaccacatacaacaccctttatgagattttgacagagcaa
gtatgtactcaagttgtacacaaaccacatccagagccagattctacagtgaaaattcag
aatccaatgattcttaaagtggtggcaactttgttgaaaaactctacaccaagtgcagaa
ctcatggaagtccgtcgtttatttttatctgatatgataaaacttttcagtaacagccga
gaaaatagaagatgcttattgcagtgttcagtgtggcaagattggatgttttctcttggc
tatatcaatcctaaaaattctgaggaacagaagatcacagagatggtttacaatatcttc
cggattcttttgtatcatgccataaaatatgaatggggaggctggagagtctgggtggat
acactctcaatagcccattccaaggtcacttatgaagcacataaggaatacctagccaaa
atgtatgaagaatatcagagacaagaggaggaaaacattaaaaagggaaagaagggaaat
gtgagcaccatatctggtctctcatcacagacaacaggcgcaaaaggtggaatggaaatt
cgagagatagaggacctctcacaaagccagagcccagaaagtgagacagattaccctgtc
agcacagacacgagagacttgctcatgtcaacaaaagtgcccgatgatattcttggaaac
tcagatagaccaggaagtggtgtgcatgtggaagtacatgatcttttagttgacataaaa
gcagagaaagtggaagcaacagaagtgaagcttgatgatatggatttatcaccagagact
ttagtaggtggagagaatggtgctcttgtggaggttgagtctttgttagataatgtgtat
agtgctgctgttgagaaactccagaacaatgtacatggaagtgttggtattattaaaaaa
aatgaagagaaggataacggtccattgataacattagcggatgagaaggatgaacttccc
aacagtagcacatcatttctctttgataaaatacccaagcaggaggagaaactccttcct
gaactttctagcaatcacattattccaaatattcaggacactcaagtacatcttggtgtt
ggtgatgatcttggattgcttgctcacatgactggtagtgttgacttgacttgtacatca
agtataatagaagaaaaagagttcaaaatccataccacttcagatggaatgagcagtatt
tctgacagagacttagcatcatcatctaaagggttagaatatgctgaaatgaccactaca
acgctggaaacggaatcttctggtagcaaaattgtaccaaatgttgatgcaggaagtata
atttcagacactgagagatctgacgatggcaaagagtcaggaaaggaaatccgtaaaatc
cagaccactgccacaacgcaagctgttcagggtcggtctatcacacaacaagacagagat
ctccgagtagatttaggatttcgaggcatgccaatgacggaggagcagcggcgccagttc
agcccgggtccacgcaccacgatgttccgcattcctgagtttaagtggtctccaatgcac
cagcgacttctcaccgatttgctctttgcattagaaacagatgtacatgtttggaggagc
cattccacaaagtctgtaatggattttgtcaatagcaatgaaaatattatttttgtacat
aacacaattcacctcatttcccaaatggtagacaacatcatcattgcttgtggaggaatt
ctgcctttgctctctgctgctacatcaccaactggttctaagacggaattggaaaatatt
gaagtgacacaaggcatgtccgcggaaacagcagtaactttcctcagccgactgatggcc
atggttgacgtactcgtgtttgccagctccctgaattttagtgagattgaagctgaaaaa
aacatgtcttctggaggcttaatgcggcagtgcctgaggctggtttgctgtgttgctgtg
agaaactgtttagaatgtcggcagagacagagagacagagggaacaaatcttcccttgga
agcagtaaacctcaagaagctccccaaggtgtgactgccacagcagcttccaagactcct
ctagagaatgttccaggtaacctttctccaattaaggatcccgataggcttcttcaggat
gttgatatcaatcgcctacgtgcagttgtctttcgggatgtggatgatagcaagcaggca
cagttcttagctctagctgttgtttacttcatttcggttctgatggtttccaagtatcgt
gacattttagaaccccagcgagagactgcaagaactggaagccaaccaggtagaaacatc
agacaagaaataaattcaccaacaagtacagttgtggtcataccatctatccctcatcca
agtttgaaccatggattccttgccaagttaattcctgagcagagctttgcccactcattt
tacaaagaaacacctgctgcattcccggacactgtaaaggaaaaagaaacaccaacccct
ggtgaggatattcatctagaaagttccattcctcataccgattcaggaattggagaggag
caagtggctaacatactgaatggggcagaattagagacgagcacaggccctgatgctatg
agtgaactgttatccactttgtcaaatgaagtgaaaaagtcacaggaaagcctgaccgag
aaccccagtgaaatactgaagcctgcaccatccatatctagcattagtcaaaccaaaggc
atcaatgtcaaggaaatactgaaaagtcttgtggccgccccagtcgaaattgcagaatgt
ggccctgagcctatcccatacccagacccagcattgaagagagaagcgcaagctattctt
cctatgcagtttcattcctttgacaggagtgttgtggtccctgttaagaagccacccccg
ggcagcttagctgtgaccactgtaggagccacagctgctggaagtggactgccagcaggc
agcacctccaatatattcgctgccactggagctacaccaaaaagtatgattaatacaaca
ggtgctgtggattcggggtcttcgtcttcttcctcgtcttctagttttgtgaatggtgct
accagcaaaaaccttccagctgtgcaaaccgttgctccgatgccagaagattcagctgaa
aacatgagcatcactgcaaaacttgaaagagctttagaaaaagttgctcctcttcttcga
gaaatttttgtagactttgccccattcctatctcgtacacttcttggcagtcatggacaa
gagctattgatagaaggcctcgtttgtatgaagtccagcacatctgtagttgagcttgtt
atgctgctttgttctcaggaatggcaaaattctattcagaagaatgcaggacttgcattt
attgagctcatcaatgaaggaagattgctatgccatgctatgaaggaccatatagttcgt
gttgcaaatgaagctgagtttattttgaacagacagagagctgaggatgtacataaacat
gcagagtttgagtcacagtgcgcccaatatgctgctgatagaagagaggaagagaagatg
tgtgaccacctcataagtgccgcaaagcatcgggaccacgtgactgcaaatcagttgaaa
cagaaaatcctaaacattctcacaaataagcatggtgcatggggagcggtttctcatagc
caattgcatgatttctggcgtttggattattgggaagatgatcttcgtcgaaggagaagg
tttgtccgtaatgcatttggctccactcacgctgaagcgttgctcaaagctgcgattgag
tacgggactgaagaagacatggtaaagtcaaagaaaacattcagaagtcaagcgatagtg
aatcagaatgcagagacagagcttatgctggaaggagatgacgatgcggtcagtctactc
caagagaaagaaatcgacaatctcgcaggtccagtggttctcagcactcctgcccagctc
attgctcctgtggtggtggccaaggggactctctccatcaccacgactgaaatctacttc
gaggtagatgaggatgatcctgccttcaagaagatcgacacaaaagtccttgcatacact
gaaggacttcatggaaaatggatgttcagcgagatacgagctgtattttcaagacgttat
cttctacaaaatactgccttggaagtgtttatggcaaaccgaacttcagttatgtttaat
ttccctgatcaagcaacagtaaaaaaagtcgtctatagcttgcctcgggttggagtaggg
accagctatggtttgccacaagccaggaggatatcactggccactcctcgacagctttat
aaatcttccaacatgactcagcgctggcaaagaagggaaatttcaaacttcgaatatttg
atgtttcttaatactatagcaggacggacatacaatgatctgaaccaataccccgtgttt
ccatgggtattaacaaactatgaatcagaagagctggatttgactcttccgggaaacttc
agggatctatcaaagccgatcggtgctttgaacccaaagagagctgtgttttatgcagag
cgctacgagacctgggaagatgatcagagccctccctaccactacaacacacattattcc
acggcaacgtccaccttatcctggcttgttcgaattgaacctttcacaaccttcttcctc
aatgcaaatgatggaaaatttgaccatcctaatcgaacattctcgtctgtcgcaaggtct
tggagaactagtcagagagatacttctgatgtaaaggaactaattccagaattctattac
cttccggagatgtttgtcaacagtaatggatataatcttggagtcagagaagatgaagtg
gtggtaaatgatgttgatcttcccccttgggcaaaaaaacctgaagactttgtacgaatc
aacaggatggccctggaaagtgaatttgtttcttgccaactccatcagtggattgacctt
gtatttggatacaagcagagaggaccggaagcagtccgggctctgaatgtttttcactac
ctaacctatgaaggctctgtgaacctggacagtatcactgaccctgtgctgagggagatt
ccagaagcttatttcattagagatccccatacgttccttcttacaaaggactttattaag
gccatggaggcacagatacagaactttggacaaacgccatctcagttgcttattgagcca
catccgcctcggagctctgccatgcacctgtgtttccttccacagagtccactcatgttt
aaagatcagatgcagcaggatgtgatcatggtgctgaagtttccgtcaaactccccagtg
acgcacgtggcggccaacacgctcccccacctgaccgtccccgcggtggtgacggtgacc
tgcagcaggctgtttgcggtgaaccggtggcacaacacagtaggcctcagaggagctcca
ggttactccttggaccaagcccatcatcttcccattgaaatggatccactaattgccaat
aactctggtgtgaataaacgacagatcacagacctcgttgaccagagcatacaaatcaac
gcacattgttttgtggtcacggcagataatcgctatattcttatctgtggattctgggat
aagagcttcagagtttattctacagaaacagggaagctaactcagattgtatttggccac
tgggacgtggtgacgtgcttggccaggtctgagtcgtacatcggcggggactgctacatc
gtgtctgggtctcgcgatgccaccctgctgctctggtactggagcggccggcaccacatc
ataggggacaacccgaacagcagtgactatcctgctccaagagctgtcctcacgggccat
gaccacgaagttgtctgcgtttctgtctgtgcagaacttggacttgttatcagtggtgct
aaagagggcccttgcctcgtccacacaatcactggagatttgctcagagccctcgaggga
ccagaaaactgcttgtttccacgcttgatttctgtttccagtgaaggccactgtatcatc
tactatgaacgagggcgtttcagcaatttcagcatcaatggaaaacttttggctcaaatg
gagatcaacgattcaacacgggccattctcctgagtagcgatgggcagaacctggtgacc
ggaggggacaatggtgtggtggaggtctggcaggcctgtgacttcaagcagctgtacatt
taccccggctgtgatgctggcattagagcaatggacttatcccatgaccagaggactctg
atcactggcatggcttctggtagcattgtagcttttaatatagattttaatcggtggcat
tatgagcatcagaacagatactga
DBGET
integrated database retrieval system