Cervus canadensis (wapiti): 122447136
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Entry
122447136 CDS
T07554
Symbol
PAN3
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
ccad
Cervus canadensis (wapiti)
Pathway
ccad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122447136 (PAN3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccad03019
]
122447136 (PAN3)
Messenger RNA biogenesis [BR:
ccad03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122447136 (PAN3)
mRNA degradation factors
3'-5' decay
Pan complex
122447136 (PAN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
zf-CCCH
zf_CCCH_4
Pkinase
zf-CCCH_4
Torus
Motif
Other DBs
NCBI-GeneID:
122447136
NCBI-ProteinID:
XP_043333488
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All DBs
Position
9:complement(79543798..79664370)
Genome browser
AA seq
905 aa
AA seq
DB search
MNSGGGLPPPSAAASSASSSLAAAAAVVAVAPPGVGGVPGGAAAAGVKLKYCRYYAKDKT
CFYGEECQFLHEDPAAGAAPGLGLHSNSVPLALAGAPGAGFPPGAVPAGGAGPPAGPKKP
ELGGPGAGGGGSSGVLDGPRLAIPGIDGGALTDTSLTDSYFSTSFIGVNGFGSPVETKYP
VMQRMTNSSSSPSLLNDSAKPYAGHDPLTSPASSLFNDFGALNISQRRKPRKYRLGMLEE
RLVPMGSKARKAKNPIGCLADRCKSGVPINMVWWNRVTENNLQTPNPTASEFIPKGGSTS
RLSNTSQSHASAFSQVFSHPSLGTPAAAGLAPGMSLSAGSSPLHSPKITPHTSPAPRRRS
HTPNPANYMVPSSASTPGNNPVSQTPSSGQVIQKETVGGTTYFYTDTTPAPLSGMRSFKN
YHRTACRAEGQIIEVFPNYHIYPPTAPHVAYMQPKANAPSFFMADELRQELINRHLITMA
QIDQADMPAVPSEVDSYHSLFPLEPLPPPNRIQKSSNFGYITSCYKAVNSKDDLPYCLRR
IHGFRLVNTKCMVLVDMWKKIQHSNIVTLREVFTTKAFSEPSLVFAYDFHAGGETMMSRH
FNDPNADAYFTKRKWGQHDGPLPRQHAGLLPESLIWAYIVQLSSALRTIHTAGLACRVMD
PTKILITGKTRLRVNCVGVFDVLTFDNSQNNNPLALMAQYQQADLISLGKVVLALACNSL
AGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQM
RNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQV
TEAGAPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVVTYSDLKRCFENTFQELIAA
ANGQL
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtggcggcggcctcccgcccccctcggccgccgcctcctccgcgtcctcctcg
ctggcggcggccgcggcggtggtggcggtggccccgccgggggtcgggggcgtccccggc
ggggcggcggcggcgggggtgaagctgaagtactgccgctactacgccaaggataagacg
tgcttctacggggaggagtgtcagttcctgcatgaggacccggccgccggggccgcgccg
ggcctcggcctccatagcaacagcgtccccctggctctggcgggcgcgcccggggccggc
ttcccgcccggagcggtcccggccgggggagccgggccgcccgcggggcccaagaagccg
gaactggggggccccggagccggcggaggcggcagcagcggggtactcgacgggccgcgg
ctggcaattcctggaatcgatggaggtgctttaactgatacgagtctcacagattcctat
ttcagcaccagctttattggagtcaatggatttggaagccctgtggagacgaagtatcct
gtgatgcagagaatgactaatagtagcagctccccaagccttctaaatgacagtgccaag
ccatacgcaggccacgatcctctaacttcacctgcttcatccttgtttaatgactttggt
gccctcaacatctctcagagaagaaagccaaggaagtatcgcctggggatgctggaggag
aggctagttccgatgggatcaaaggcacgaaaagcaaagaaccctattggctgccttgct
gacaggtgtaaatcaggagtacccatcaatatggtttggtggaacagagtcacagaaaac
aatttacagacaccaaatcctactgcaagtgagtttattcccaaaggaggatcaacctcc
aggctgagtaacacgtcccagtcacatgcgtctgccttctctcaagtgttctctcaccca
tccctggggactcctgctgctgctggattagcaccaggaatgtcactgtctgctggatcc
tcccctcttcactcccccaagatcactccacatacttctcccgctcccagaagaagaagc
cacactccaaatccagcaaattacatggtgccttctagtgcctctacgcccggaaataat
cctgtttctcagacaccatcttctggtcaagtgatccaaaaggaaaccgtcggtggaacg
acgtacttctatacagacacgactccagcacctttgagtggaatgagatctttcaaaaat
tatcacagaacagcttgccgagcagaaggtcaaataattgaggtatttcccaattaccac
atctatcctccaactgcacctcacgttgcttatatgcagccgaaagcgaatgcaccttcc
ttcttcatggctgatgaactgcgacaggagctgataaacagacatttaataacaatggct
caaattgatcaagcggatatgccagcagtcccttcagaagttgacagctatcatagcctg
ttccctctagaaccactgccaccacccaaccggatacagaaatcaagtaattttggatat
attacgtcctgctacaaagctgtaaatagcaaagatgatctgccttattgccttcggagg
atacatggttttcgtcttgttaacacaaagtgcatggtattggttgatatgtggaaaaaa
attcagcattcaaatattgtaaccttgcgtgaagtatttaccactaaagctttctcagag
ccttctcttgtgtttgcatatgatttccatgctggaggagagaccatgatgagcagacac
ttcaatgaccccaacgcggatgcctatttcacaaagagaaagtggggtcaacatgatgga
ccgttgcccagacagcatgctggattgttgccagaatctcttatttgggcatatattgtc
cagctgagttctgcactgcgtaccattcataccgcaggtttggcatgtcgcgttatggac
ccaacaaagattctgataactggcaaaacaaggttgcgagtaaattgtgttggagttttt
gatgttttaacatttgataacagtcagaataataatccattggcattaatggctcaatac
cagcaagcagatctgatatcattaggaaaagttgtgttggctttggcttgcaactctttg
gcaggaattcagcgagagaatttacagaaagccatggaactggtgacaatcaactactcc
tctgacctgaagaatctgattttatatttgttgactgaccaaaacaggatgcgaagtgta
aatgacatcatgcccatgattggtgctcgattttatactcaattggatgctgctcaaatg
agaaatgatgtcatagaggaagaccttgcaaaggaggttcaaaatggaagactgtttagg
cttctagcaaaattgggaacaatcaatgagaggccggagtttcagaaggatcctacctgg
tcagagacgggagaccggtacctgttgaagctctttagggatcatctttttcatcaggtg
acagaagcgggtgctccttggattgacctcagtcatatcatttcttgtcttaacaagtta
gatgctggtgtgccagaaaaaataagcctcatttccagagatgagaagagtgtacttgtg
gtgacttacagtgacttaaagcgatgctttgaaaatacttttcaagaactgattgcagct
gcgaatggtcagttgtag
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