Cervus canadensis (wapiti): 122447469
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Entry
122447469 CDS
T07554
Symbol
SOX1
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
ccad
Cervus canadensis (wapiti)
Brite
KEGG Orthology (KO) [BR:
ccad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccad03000
]
122447469 (SOX1)
Transcription factors [BR:
ccad03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
122447469 (SOX1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
122447469
NCBI-ProteinID:
XP_043334050
LinkDB
All DBs
Position
9:complement(1212816..1216417)
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AA seq
368 aa
AA seq
DB search
MYSMMMETDLHSPGGAQAPTNLSGPAGAGGGGGGGGGAKANQDRVKRPMNAFMVWSRGQR
RKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRKT
KTLLKKDKYSLAGGLLAAGAGGGAAVAVGVGAAAVGQRLESPGGAAGGGYAHVNGWANGA
YPGSVAAAAAAAAMMQEAQLAYGQHPGAGGAHPHAHPAHPHAHHPHAHPHNPQPMHRYDM
GALQYSPISNSQGYMSASPSGYGGLPYGAAGGAHQNSAVAAAAAAAAASSGALGALGSLV
KSEPSGSPPAAAHSRAPCPGDLREMISMYLPAGEGGDPAAAQSRLHSLPQHYQGAGAGVN
GTVPLTHI
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggagaccgacctgcattcgcccggcggcgcccaggcgcccacg
aacctgtcgggcccggccggggcgggtgggggcggcggcggcggcgggggcgccaaggcc
aaccaggaccgagtcaagcggcccatgaacgccttcatggtgtggtcccgcggtcagcgg
cgcaagatggcccaggagaaccccaagatgcacaactcggagatcagcaagcgcctgggc
gccgagtggaaggtcatgtccgaggccgagaagcggccgttcatcgacgaggccaaacgg
ctgcgcgcgctgcacatgaaggagcacccggattacaagtaccggccgcggcgcaagacc
aagacgctgctcaaaaaggacaagtactcgctggccggcgggctgctggcggccggcgcg
ggcggcggcgcggccgtggccgtgggcgtgggcgcagcggccgtgggccagcggctcgag
agccccggcggcgcggcgggcggcggctacgcgcacgtcaacggctgggccaacggcgcc
taccccggctcggtggcggcggcggcggccgccgcggccatgatgcaggaggcgcagctg
gcctacgggcagcacccgggcgcgggtggcgcgcacccgcacgcgcaccccgcgcacccg
cacgcgcaccacccgcacgcgcacccgcacaacccgcagcccatgcaccgctacgacatg
ggcgcgctgcagtacagcccgatctccaactcgcagggctacatgagcgcctcgccctcg
ggctacggcggcctcccctacggcgccgcgggcggcgcgcaccagaactcggccgtggcg
gcggcagcggcggcggcggccgcgtcgtcgggcgccctgggcgcgctgggctcgctcgtc
aagtcagagccgagcggcagcccgccggccgcggcgcactcgcgggcgccgtgccccggg
gacctgcgcgagatgatcagcatgtacttgccggccggcgagggcggcgacccggcggcg
gcacagagccggctgcactcgctgccgcagcactaccagggcgcgggcgcgggcgtcaac
ggcacggtgcctctgacgcacatctag
DBGET
integrated database retrieval system
